Oryzias latipes (Japanese medaka): 101169924
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Entry
101169924 CDS
T02443
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101169924 (mindy4)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101169924 (mindy4)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
101169924 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
WDR55
Motif
Other DBs
NCBI-GeneID:
101169924
NCBI-ProteinID:
XP_011472163
UniProt:
A0A3B3IC37
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All DBs
Position
4:complement(8615468..8624407)
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AA seq
671 aa
AA seq
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MIAFVEEVSSSLVREFLSRKGLKKTIACMDEEHPRTATSINNRSLLRQVLNIEDLYRRNK
VQNPPLKTVLEIIVKHHMEQQKKVKIMTGDGETARTVTPPAFTAGSPLICDTEENSSRSE
IKATHSSPSTFLSLLSDENKSSGHDQKDVSAYDSERQKCQPLTSLQQEWESSAQKEPEKK
SEAISRSRTNRNRRGMMSGPIPREMGRKKPSPRYDAAQPLFRRDGENQHSDDAHLDINTH
SCAGRKPGLQRSPESLQSENNNRGNKAKAVNKNHMPNNSDLNVSDLVLDDVDDEDLQEIS
QVSVQRSVSECLPKSRPIDQSIAMDLKAVLLGSSLNCFSAEWRNQGLTFSDTHDLRYGIV
QRKGGPCGVLASIQAFILKKLLFENTESSDSDLQRLRPSNATRRKCLVLALAEVLWKAGE
EERATVAVNTGLNHFTPSGRYRSEGVLEKMVLFTVDNLRDLQILVEQHIEQFETGTLGCI
LLTISAVLSRSIEKVKEDMDVSSSTLIGAHGYCTQELVSLLLCGRAVSNVFDDDMELDSG
GGDTTLLKGIKSRCDVGLLSLFEHYNICKVGAHLKTPSYPIWVVCSESHFSVLFGLQREL
LTSKDQHLEFDLYYYDGLANQQEEIRLTVTVGKWRRSFQEVDSDSIPPLELCIRTRWKDV
EINWNDTEPIL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcttttgttgaagaggtttcttcttcactcgtgcgggagtttctgagccggaag
ggcctgaagaagactattgcctgcatggatgaagagcatccacgaacagcgaccagcatc
aataacagatcactgttgagacaagtgctcaacatcgaagatctgtacagaagaaataag
gttcaaaatcctcctctgaagacagtactggagattatagtgaaacatcacatggagcag
cagaaaaaagtcaagatcatgacaggagacggtgaaactgcccggaccgttaccccacct
gcttttactgcaggatcacctttgatatgtgacacagaagaaaacagcagcaggtctgag
ataaaagcaacacactcctctccgtctacatttctatcactgctgtcagatgaaaacaaa
tcatccgggcatgatcaaaaagatgtctcggcttatgattcagaacgtcagaaatgccag
ccactgacttccctgcaacaagaatgggagagctctgcccagaaggagccagagaaaaaa
agtgaagccatctcaaggagcagaactaaccgcaacagacgaggcatgatgtctggacca
ataccacgggaaatgggcaggaaaaaaccaagtccaaggtacgatgcggcccaaccgctt
ttcagaagggatggagaaaaccagcattctgatgatgcacacttggatatcaacacacac
agctgtgcagggcggaaacctgggctgcaaaggtctccagaaagcctgcagagtgaaaac
aacaacagaggaaacaaagcaaaagcagtgaacaaaaaccacatgccaaacaattctgat
ctgaatgtgtccgacttggttttagatgatgtagacgacgaggatctgcaggaaatctcc
caagtatctgtgcagaggtccgtgtcggagtgtctccctaaaagccgcccgattgaccag
agcatagccatggatttaaaagcagttcttctgggctccagcttgaattgtttcagcgca
gagtggagaaatcagggtctgaccttctcagacacgcatgacctcagatacgggatcgtg
cagagaaagggtggtccttgtggagtcctagcatctattcaagccttcatcttaaagaaa
cttctttttgagaacactgagagcagtgattctgacctgcagcggttaagaccttccaac
gcgaccaggagaaagtgtcttgttttagctttggcagaagttctgtggaaggctggtgag
gaggaacgagcgacagtcgccgtaaatacggggctgaatcatttcacaccaagtgggcgc
tacaggtctgaaggagtacttgaaaagatggtgctcttcactgtggacaacctcagggat
ctgcagattcttgtggagcagcacatcgagcagtttgaaactggaacgctgggatgtatc
ttgctgaccatatcggctgttctgtcccgatccattgaaaaagtcaaagaggacatggac
gtgtccagctccacgctcatcggtgctcatggctactgcactcaggagctggtcagcctg
ctgctctgcggcagagccgtgtccaacgttttcgatgacgacatggagctggactcaggc
ggcggcgacaccacgctcctcaaaggaatcaagagccgctgtgatgtgggcctgctgtct
ctctttgaacattataacatctgtaaggtgggagctcacctgaagaccccttcttacccc
atctgggtggtgtgcagtgaaagtcacttcagcgtgctgtttggcctgcagagggagctg
ctgacctccaaggaccaacacctggagtttgatctctactattatgatggactggccaat
cagcaggaggagatccgcctcaccgtcacggttggtaagtggcgccgcagctttcaagaa
gtagacagtgactccattcctcctctggagctttgtattcgcacgaggtggaaagatgtg
gaaatcaactggaatgacactgaaccgattctctaa
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