Oryzias latipes (Japanese medaka): 101169939
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Entry
101169939 CDS
T02443
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101169939
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101169939
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101169939
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
MKS complex
101169939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
UPF0242
DUF1192
Motif
Other DBs
NCBI-GeneID:
101169939
NCBI-ProteinID:
XP_011474696
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Position
6:26744492..26762937
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AA seq
1266 aa
AA seq
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MLHPPPPNNPEIAVFCWWNLPDPGCIMSSLLDETADDAPVKDVAARQQPRLPAVARDLAG
NRHAWAPQDVSRVSRDELEDRFFRLHEETLQLKQHIHKQDEKIRKLGTKLVRLVKDRERL
QQMAAGKVQPPSRVRDIETEEMIEELQENVRGLQAEKEELKQRLLVAKNQVINSQRWRPT
PYGRVQPQVDSGLAKLRDDASSPSRARPRGLRSWDTERKPPTGQLPRYGHSLLEEARGEI
RNLNNVIESQQSQIEELERASELLREELKKKEAEYEEHLQQMRQQQTFSLRSQVNSNVSL
IKLQKQLADRSNVVTMLEGRFVSLQEAQQTLKTCLDGAMAKVEELTAQLKEERLKSLELE
TVVQNANITKTQREKLQERIHELEQERDLLREENKRLQHSAFDISQQQKWQLQEQQLKLQ
ISQLETALKADLVDKNEILDKMKAERDRNEQLAEENRRVHLRILEQKQQLEELSSRLKFC
SRENDYSEAELTEALLLIKTRKSQRSGDLGFLAEEEGSNSKETSIRELRAAHAETFQELE
KTRKLLSMESRICKDYKAELEVVVEKANKDRAEYEQKLKHQTQLLDARAAKIHKLEAKFK
DIAYSPKTFMTRAEPADTGESDEASGRTSCENLVEFQIVSVSLSPATLQALGDAELSTFC
TYSFYLFELHATPVVTGVSPKYDFTSRYAVSMDKHFLDYLDKSSVTVELHQAQDWKTIGS
GEIRLQDLLGREGSVHGSIPLFGTQGSPCLGSLEYCLRLKTPMAETKRLLAETAASSAHS
AHPQLLPSVTDSWNELFITIHRCSDLRSVHSQFPSPYVVYKFYSFPDHPSATVHDCCDPE
FNDLKSYFVPMDSDLDRYLRSETLRIYVFDFKEERMDMFVGKAAVSLLPLVNDQTFSGVF
ELVDPSGRPAGHIEVLFGWKLTYVPPPGSVTATDSRLITERRPSEDPASLTPEPKTENKE
RTDTGQNTHWACSETIAGEVAPPEPTKHKTQKEVRASAKRVTFVESTDAEALIRDEAPRS
ANEEEELEEEESHVSEGQLIPSSQSYSDDSDISEEIPEDVVNTPVAGDVQRESPQSDSDD
CIVQGLSTQKKALPRIRLEIVSLSLRPQSRLAQDDSVVRLFVEYSFLDLPTEETPLSLPK
PLPGRSINYNYSKVIPVDPESNAARRSLLKEVLQGQSPQMERIRFTVVSEPPEEEEQERE
CEDVGVAYLRIPEILEKQEELMEVDLDVLDVEDNNEVLGHLTVSVEGLEALQAIMEDLDK
AEPVLD
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgttacaccccccaccccccaataatccggaaattgctgtattttgttggtggaattta
cccgatccaggctgcattatgtcgtctctgctggacgagacggctgacgatgctcccgtc
aaagacgtcgctgcccggcagcagcctcgcctccctgctgttgcacgtgatttggcagga
aatcgacatgcttgggctccacaggatgtctcacgtgtgtccagggatgagctggaagac
cgtttcttccgtctgcatgaagagacgctgcagctcaaacagcacatccacaaacaggat
gaaaagatcagaaagctgggcacaaagctagtgcgtcttgtgaaagaccgtgaacgactt
cagcagatggctgctgggaaggtgcagccgcccagcagggtccgagacatagaaacagaa
gaaatgatagaggagctccaggagaacgtcagggggctgcaagctgaaaaagaagaactg
aaacagcgcctcctggtggccaaaaaccaggtgatcaactcacagaggtggaggccaaca
ccttatggacgtgtgcagccacaggttgactccggccttgccaagcttagggatgatgct
tcgtctccttcccgtgctcgacccagaggtttgaggagttgggatacagagaggaagcct
cccaccgggcagcttcctcgatatggacacagcttattggaggaggcccgaggagagata
cgtaacctaaacaatgtcattgagtcccagcagagtcaaatagaagagctggaacgagca
tctgagctgctgagggaggagctgaaaaagaaggaggcggagtatgaagagcatcttcag
cagatgcgacagcagcaaaccttctctctaaggtcccaagtcaacagcaacgtgtcgctg
atcaaactgcagaagcagctggctgaccgctccaacgtcgtcaccatgctggaaggtcga
tttgtgagcttgcaagaggctcagcagacgttaaagacctgtctggatggagcgatggcg
aaggtggaggagctgacagctcagctgaaggaggaacggctgaagagtctggagctggag
acagttgtgcagaatgccaacatcaccaagacccagagggagaagttacaggagaggatc
catgagctggagcaggagagggacctgttgagggaggaaaacaagagacttcagcacagt
gccttcgacatttctcagcaacaaaaatggcagctccaggagcagcagctgaagctgcag
atctctcagctggagacggcgctgaaggctgacctcgtcgacaaaaatgagatcctggat
aaaatgaaagctgaaagagatagaaatgagcagctggcagaagaaaacaggagagttcac
ctccgcattctggagcagaagcagcagctggaggagcttagcagccgcctgaagttctgc
agcagggaaaatgattacagcgaagccgagctcactgaggcactcctcctcatcaagaca
cgtaaatcccagaggagtggggacctgggtttcttggctgaggaggaggggagcaatagc
aaggagacctccatcagagagctgagggcagcccacgccgagaccttccaggagctggag
aagacgcgaaaactcctgagcatggagagccgcatctgcaaggactacaaggcggagctg
gaagtagttgtggagaaggccaacaaagacagagcggagtacgagcagaagctaaagcac
cagactcagctgctggatgccagagctgcaaaaatccacaaactcgaagctaagttcaaa
gacatcgcatacagccccaagacattcatgaccagagcagagcctgcagatactggagag
tctgatgaagcttctgggagaacctcctgtgaaaaccttgtggagtttcagatcgtcagc
gtctcgctgtctccagccaccttgcaggctctgggggatgctgagctctccaccttctgc
acgtactctttttatctgtttgagctgcacgctactcccgtggtgacgggcgtcagcccc
aaatatgacttcacctccaggtatgcagtgagcatggacaagcacttcctggactacctg
gacaaaagctcagtgacggtggagctacatcaggcccaggactggaagactattggaagt
ggagagatacggctgcaggatctgctggggagggaggggagtgtccatggcagcattcct
ctgttcgggacacaggggtcgccgtgcttaggctctctagaatattgtttgagactgaag
acccccatggctgaaaccaagaggctgcttgcagagacggctgccagctccgcccactcc
gcccacccacagctgctgccatcagtgaccgacagctggaatgagctcttcatcaccata
caccgctgctcggaccttcgctccgtccactcccagttcccgagtccatatgtggtttac
aagttctacagcttccctgaccatccctctgcaaccgtccatgactgctgcgacccggag
ttcaatgatctgaagtcctactttgtccccatggattcagacctggaccggtacttgagg
tctgagacgcttcggatctatgtgtttgacttcaaagaggagcggatggacatgtttgtc
gggaaagccgccgtttccctgctgccgctggtcaatgaccagaccttttctggtgtattt
gagctggtggacccgtcaggacgtcctgctggacatattgaggtgctgttcgggtggaag
ctcacttacgttcctcctccgggatccgtcactgcaacagactcgagactcattacagag
aggagaccttctgaggatccagcaagtctgacaccagaacccaaaactgaaaataaagaa
aggactgacacaggacagaatacacactgggcctgttctgaaactatagctggagaggtg
gcgccaccagaacccacgaaacacaagacgcaaaaggaggtcagagcgtcggccaaacga
gtcacgtttgtggagtccacggatgcagaagcgctgatcagagacgaagctcctcgcagc
gccaacgaggaggaggagctggaggaggaagagtctcacgtctctgagggtcagctgatt
ccaagctcccagtcctactcggatgattccgacatctctgaggagattcctgaagatgtt
gtcaacactcctgtagctggagacgttcagagagaatcgcctcagtccgacagcgacgac
tgcatcgtccagggtctgagcacgcagaagaaggcgttgccgaggatacgactggaaatt
gtttctctgagtctgcgaccgcagtcccgcctggcgcaagacgactctgtggttcgcctt
ttcgttgagtactccttcttggatctccccactgaggaaacccccctgtccctgccaaag
cccctcccaggccgcagcatcaactacaactacagcaaagtaatccctgtggatcctgag
agcaacgcggctcggcggtcgctgctcaaggaggttctgcaaggacagagccctcagatg
gagagaatccgctttacagtggtgagtgagccgccggaagaggaggaacaagagagggag
tgtgaggatgtgggtgtggcctacctgagaatacctgagatcctggagaaacaggaagag
ctgatggaggtcgacttggacgtgttggacgtggaggacaacaacgaggtgctgggccac
ctaactgtgtctgtggaggggctggaggcactgcaggccatcatggaggacctggacaaa
gccgaaccagtactggactga
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