Oryzias latipes (Japanese medaka): 101170132
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Entry
101170132 CDS
T02443
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101170132 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101170132 (pou2f1)
03021 Transcription machinery [BR:
ola03021
]
101170132 (pou2f1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101170132 (pou2f1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
101170132 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101170132
NCBI-ProteinID:
XP_011487690
UniProt:
H2MBJ6
LinkDB
All DBs
Position
21:complement(10735041..10761298)
Genome browser
AA seq
715 aa
AA seq
DB search
MADGGAASQDESSGPDTKVSNRSESAKCAMESGDTNTGIQTNGLDFQRQTVTNAHTQALL
QQSKSEDSGALPTSVQQSVLPQTQLMLTGGQIPGLTLTPTQQLLIQQAQAQILAAAVQQH
TASQQNSTTGANISATAATPITQLPLSQPIQITSQLQQQSLGLPQFVLVQPGHHIATSLQ
PAQFIISQTPQAQQGILQPQSLLTQLPQSQANLLPTQPSINLATQPSTPTRTTAATPIQL
PQSQTPPKRLDTPTLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQT
TISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSALGSPGMGMEGINRR
RKKRTSIETNIRVALEKSFVEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRIN
PPSSGNGVGGNTPLKAIFTPSSPLVASTASLVSSPTINTSTTLTVNPVMPLTSTSVSTLS
FTGTTVGATNTASVISTTPLVTTATSSPSLSPSPTIIQSTSTDSKAGIQSQTIMTQAATS
VPSTLGTGQVMVTAQGLSAALQGAAQLPTSASFAAMAAAAAGLNPGLMASSQFAPGGALL
SLAPGGLGSALSPALMSNSTLATIQALASSGTIPITSLDGGNLLFANTSSASTPGLVTTP
LFLSPQNLSLLTSNPVSLVSAGAGGLQVTADANHQATSVAVPMQTSTITTASKAQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatactaaagtgagt
aatcggtcagaatctgctaaatgtgcaatggaaagcggtgacacaaacaccggaattcaa
accaatgggttggactttcagaggcagacagtcactaatgcacacacacaagccctcctc
caacagtctaagtcagaggactctggtgctctaccgacctccgtccagcagagcgtattg
cctcaaacccagctaatgttgaccgggggacagattcctggattgaccctgaccccaacg
cagcagctgctgatccagcaggcccaggctcagatcctggctgcagctgtgcagcagcat
acagccagccagcagaacagcaccactggggccaacatctcagccactgcagccacgccc
attacccagttacccctctcacagcccattcagattacctctcagctacaacagcagagt
ttaggcctgcctcagtttgttctggttcagcctggtcatcacattgctacttcactgcag
ccggctcagttcatcatctcacagacaccgcaggcccagcaaggtatattgcaaccccag
agtcttctaactcaactacctcaaagccaagctaacctcctgccaactcaaccaagcatc
aaccttgcaactcagccttcaactccaacccgaactacagcagccacgcctattcagctg
ccccagagtcagacaccacccaagcggttggatactcccacgctggaagaaccaagtgat
cttgaggagttggagcagtttgccaagactttcaaacagagacgaattaaactgggcttt
acacagggggacgtcggcctggccatgggcaagctgtatggaaacgacttcagtcaaacc
accatttctcgctttgaggccttgaacctgagctttaagaacatgtgcaaacttaagcct
ttgctggagaagtggcttaatgatgcagtttgtgcagagaacctgacatcggatcaggcc
ttgtccagccccagtgctctgggctccccgggcatgggcatggaggggatcaaccgcaga
cggaagaaaaggaccagcatcgagaccaacatccgagtggccttagaaaagagctttgtg
gagcagaaccaaaaacctacctctgaagagatcaccatgatcgctgaccagctcaacatg
gagaaggaggtgatccgggtctggttctgcaatcggcgtcagaaagagaagaggatcaac
ccccccagcagtggcaacggtgtaggaggcaatacccccctcaaagccatctttacaccc
agcagccctttggtggccagcacagcgagccttgttagcagcccgaccattaacacgtca
accactctgactgtaaacccagtgatgcctctcaccagcaccagcgtctccactttgtct
ttcacaggaacgacagttggagccacaaacactgcatctgtcatctctaccacacctttg
gttaccacagcaaccagctctccatctttaagcccctctccaacaattattcagtccaca
tccacagacagcaaagctggcattcagtctcagaccatcatgacgcaggcggccacatct
gtgccctccaccttagggacagggcaggtgatggtgacagcacaagggctgtcggctgcg
ctgcagggcgcggcccagctgcccaccagcgcaagctttgcagccatggccgctgcagct
gcaggcctcaatccgggactgatggcttcctctcagttcgctccagggggcgctcttctt
agcctggctcccggggggctcggcagcgcgctaagtcctgctctgatgagcaacagtacc
ctagctaccattcaagcactggcgtccagcggcaccatccccatcacctctctggacggc
gggaacctgttgttcgccaacacgtcgtccgccagcacgcccggcctggtgaccacgccg
ctatttctgagcccccagaacctgtcgctgctcaccagcaaccccgtcagcttggtgtca
gccggcgccggggggctccaggtcaccgcggacgccaaccatcaggccacctcggtcgct
gtgcccatgcaaacctccaccatcaccactgcctccaaggcccagtga
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