Oryzias latipes (Japanese medaka): 101170275
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Entry
101170275 CDS
T02443
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170275 (trim36)
04121 Ubiquitin system [BR:
ola04121
]
101170275 (trim36)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101170275 (trim36)
Membrane trafficking [BR:
ola04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
101170275 (trim36)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101170275 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Pur_ac_phosph_N
fn3
Cdh1_DBD_1
DUF1826
Motif
Other DBs
NCBI-GeneID:
101170275
NCBI-ProteinID:
XP_023814139
LinkDB
All DBs
Position
9:complement(10476889..10502401)
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AA seq
757 aa
AA seq
DB search
MSDSEDMTEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVREL
LMLNHDDSFDAGSECSLPGSPRSRVPSPSMERLDRLVRSATVRRSFGSRGSISSPGWRRG
SVTPRVTTIPCPGCQHDIDLGERGISMLFRNFTLENIVERYRQAARAAVAIMCNICKPPN
QQEATKSCMDCKASYCNECFKLHHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMY
CEVCKRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLAKSIHYLISKEDQVRTQITELEL
LISQTEENGQLAERQANEHFERLFETLQERRSEMLRSIEQSRNRRMEQLKSQVEEYQGML
ENSGLVGYAQEVLKETDQSCFVQTAKQLHVRIQKATDSLRTFHPAADTCFDEFVLDTSRE
ETLLKEMCFGGVPDPPLIDLSQSKVYNEASICWRLADDHLPTDQHVLEYRRLVGPSQSPS
KEDGEDGGLWRATDRVYGSNTIVNDLEPDSLYSFRVRSCRNSMFSPYSPEVAFHTPPAPV
FGFLLSDKCGFSAERLVLNKRRDTVESVAGAAFLLAAERVQTGSYISLDYIIGDTGISQG
RHYWAFKVEPHSYMVKVGVASDTKILEWFHNPRDTSSPRYDHDSGHDSGSEDACYEVSQP
FILLTLGMGKLFIPKASSSTANPPASDPGNRVLPMPQRLGICLDYDSSRVFFYDADTMRC
IYERQVDCSGTMFPAFGLMGSGKVQLEDFITAKRLTF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactccgaggacatgacggagttcgccagcatcgtagagcggatcgagaggggc
gaggttcccatcaagaacattgagagggagctgatctgccccatctgtaaggagctcttc
acccacccgctgatcctgccctgccagcacagcgtctgccacaaatgtgtgcgggagctg
ctcatgctgaaccacgacgactccttcgatgccggttccgagtgctccctgcccggcagc
cccaggtccagggtgccgtctccctccatggagaggctggacaggcttgtgagatcagcc
acagtgcgaaggtcgtttggaagtcgaggttccatctcttctccgggctggcgaagaggt
tccgtcactccccgggtcaccaccatcccgtgcccgggctgccagcatgacatcgacctc
ggcgaacgcggcatcagcatgctgttccgcaacttcaccctggagaacatcgtcgaacgc
taccgacaagctgcccgcgcggccgtcgcaatcatgtgcaacatctgcaaacctcccaac
cagcaggaggcgacgaagagctgcatggactgcaaggctagctactgtaacgagtgcttc
aagctgcaccacccctggggcactccaaaagcccagcatgagtatgtgggccccaccacg
aattttagacccaaggtgctcatgtgcccagagcacgagatggagaaggtgaacatgtac
tgtgaagtctgtaaacggccagtgtgtcacctatgcaagctgggaggatcccacgccaac
cacaaagtcacttcaatgagcagtgcctacaagatcctcaaggagaaactggccaagagt
atccattacctcatcagcaaagaggatcaggtcaggactcagattactgagctggagcta
ctcatcagtcagacggaggaaaatggtcagctggctgagcgccaggccaacgagcacttt
gagcgtctgtttgagactcttcaagaaagaagatccgagatgctgcgatccattgagcag
tctcgtaaccggcgaatggaacagctgaagtcccaggtggaggagtaccagggtatgctg
gagaacagtgggttggtcggttacgcgcaggaggtgttgaaggagaccgatcagtcctgc
tttgtacaaactgcaaagcagctgcatgtcaggatccagaaagccacagactccctgagg
acgttccatcctgcagctgacacctgctttgacgagtttgtactggacacatccagagaa
gaaacgctcctcaaggagatgtgctttggtggagttccagacccccctctgattgacttg
tcccaaagcaaagtctacaatgaggcctcgatctgctggaggctggcggacgaccatctt
cctacagatcagcatgtgcttgagtatcgcagacttgtaggcccgagccagtccccgtct
aaggaggacggagaagacggcgggctctggagggcgacggacagagtatatggaagcaac
actatagtgaatgacctggagcctgactccctgtactccttcagagttcgaagctgcagg
aactccatgttcagtccctacagccctgaagtggcctttcacacaccgcctgctcctgtt
tttgggttcctgttgagtgataaatgtggcttcagcgccgaaaggctggttcttaacaaa
agacgagacacagtcgagagtgtggcaggcgcagcctttctcctcgcagctgaacgcgtg
cagacgggtagctacatcagcctagactacatcattggagatacgggaatttctcaagga
aggcactattgggcgtttaaggtggagccgcactcctacatggttaaggtgggagtggct
tcagatacaaagatccttgaatggttccacaatccaagagacaccagcagcccaaggtac
gaccatgacagtggacatgacagcggcagcgaggacgcgtgttacgaagtctcccaaccc
ttcatcctcctcacacttggcatgggcaaactcttcatccccaaggcctcttcctccacc
gccaacccaccggccagcgatcccggcaaccgcgtgctccccatgccccagcgcctgggc
atatgcttggattacgactccagccgagtcttcttctatgacgcagacaccatgaggtgc
atttacgagaggcaggtggattgctcgggaacaatgtttccagcttttggcctcatgggc
agcggaaaggttcagctggaggacttcatcacggcgaagagactgactttctga
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integrated database retrieval system
