Oryzias latipes (Japanese medaka): 101170408
Help
Entry
101170408 CDS
T02443
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00600
Sphingolipid metabolism
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
101170408 (smpd3)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
101170408 (smpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
101170408
NCBI-ProteinID:
XP_011471160
UniProt:
A0A3B3IJL1
LinkDB
All DBs
Position
6:4178128..4238815
Genome browser
AA seq
716 aa
AA seq
DB search
MVLYSTPYSSTCLHFLDGLSWSLVFPCYWLLDRLLASCVPTSLEKRQRSQDPCSFLTLCV
LISVPLYLLLFFASLPFALLGFIIWAPLQAVRQPYLYTYRRPDKSEQCQAGPGGAGTGEW
RPQGRSFCFCSANVCLLPDSLARFNNLSNTHKRALEMGKRIRNGASRPQIKIYIDSPTNT
SISAASFSSLATGFRRTSSLDQRPDQTHTTNGPAETEVETMTECPIHPPGVTECPVHPSS
GVQGSGECPVHQDDTTADCLLHSTNNSSDCPIHTSGEAADCPMHSPGGQSVPAQPDCHMR
EEGRQHRASIDCPLHTSGVQISISAPEPDPQEEDTVETRNHREVGGDTGSMTASRESLAR
YHACDGGIGISSNNTLSHVPRTSIFKRPGRKRRHGDETFDHEISAFFPANLDFMALQEVF
DHGATSKLRRQLHRYFPYVLSDVGRYGWKGCCSRFKFLNSGLLLASRYPILDARFECYPN
GRGEDALAAKGALFAKVHVGTSHQEQRVVGFITCTHLHAIEGDAAVRCEQLDLLLQWGAE
FRQSSCQSPEGEKVLEDLVAFDVILGDLNFDNCSSEDKLEQQHALFTQYKDPCRLGPGED
KPWALGTLLDPSGLYDEDVTSAESLQKVMENEDGRKEYLVFPPSKNQCPGSSQKGRKIPL
KGNGRRIDYILYSDEGLQPDWKLDIEEFSFVTQLAGLTDHLSVATRLAVSTGEEEP
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtcctttacagcaccccctactccagcacctgcctccacttcctggacggtctgtcc
tggagcctggtgtttccctgctactggctactggaccgcctgctggcgtcctgtgtgccc
acctccctggagaaacggcagcgctcccaggacccctgctccttcctcaccctttgtgtc
ttgatctctgtgcccctttacctgctgctgttcttcgcctccctgcccttcgccctgctg
ggcttcatcatctgggcccccctgcaggcggtccgccaaccatacctgtacacctaccgc
agaccagacaagtctgagcaatgccaggctggaccagggggggcagggactggagaatgg
agaccccagggcagaagcttctgtttctgcagtgccaatgtgtgcctcctacctgactcc
ctggctagattcaacaacctgtcaaacacccacaagagagccctggagatggggaagagg
atccgtaacggtgccagtcgaccccagatcaaaatctacatcgattcaccaaccaacact
tccatcagtgccgcatccttcagcagtcttgccacaggttttcggcgtacctcgtccctg
gaccagcgtccagaccaaacacataccaccaatggcccagctgaaactgaagtagaaacc
atgacagagtgtccgatacaccccccaggagtcacagaatgtcctgttcatccgtcctca
ggagttcagggttctggtgaatgccctgttcaccaagatgacaccacagcagactgcctc
ctccactcaactaacaacagctcagactgtcccattcacacctcaggtgaggctgcagac
tgccccatgcactctcccgggggtcagagtgttcctgcgcaaccggactgccacatgcgt
gaggaagggaggcagcacagagcctccatagactgccctcttcacacatcaggggttcag
atcagcatcagtgctccagagccagacccccaggaggaggacacagtggagaccaggaat
caccgcgaagtgggcggggacacaggcagcatgactgcctctagggagtccctggctcgt
tatcacgcttgtgatgggggcattgggatatcctccaataatacactctctcatgtcccg
cgaacgtcaatcttcaagcgcccaggacgaaaacgtcgccatggagatgagacattcgat
cacgagatctctgcattctttcccgccaacctggatttcatggcactccaggaagtcttt
gatcatggagcaacatccaaattgcgtcggcagttgcacagatacttcccctatgtgcta
agtgatgtggggaggtatggctggaagggctgttgctccaggttcaagttcttgaacagt
ggccttttgctggccagtcgctaccccatccttgatgcccgatttgagtgctaccccaat
ggaaggggagaagatgccctggccgccaaaggggcgctgtttgctaaggtccacgtgggc
acttctcatcaggagcagagggttgtgggattcatcacgtgcacacatctccacgcaata
gaaggcgatgctgcggtccgctgcgagcagctggacctcctgctgcagtggggggccgag
tttcgccagtcctcctgtcaatcacctgagggggagaaggttctggaagacctggtggcc
tttgatgtcatcttgggagacctgaactttgacaactgctcttcagaggacaagctggag
cagcagcacgctctcttcacgcagtacaaggacccatgccgcctcgggccaggagaggac
aaaccctgggctctgggtactctgctggaccccagcggcctttatgacgaagacgtcacc
tcagctgaaagtttacaaaaagtgatggagaacgaagacggcaggaaggagtatctggtg
tttcctcccagtaagaaccagtgtcctggcagcagtcagaagggcaggaagataccgctg
aagggaaacgggcgcaggatcgactacatcctgtacagcgacgagggccttcagccagac
tggaagctggacatcgaggagttcagctttgtcacccagctggccggcctcaccgaccat
ctgtctgtggccacgcggctggccgtttctacgggggaggaggagccttag
DBGET
integrated database retrieval system
