KEGG   Oryzias latipes (Japanese medaka): 101170470
Entry
101170470         CDS       T02443                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03020  RNA polymerase
ola04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101170470 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101170470 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ola03021]
    101170470 (polr3e)
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     101170470 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 101170470
NCBI-ProteinID: XP_004080514
UniProt: H2M4Y0
LinkDB
Position
19:complement(13135105..13145776)
AA seq 686 aa
MASGDEDDPIIEEIDVYLAKSLADKLYLFQYPVRPAIMTYDKVTHLAAKIKPKQQRVEVD
ISMDTMSPNYCRSKGEQIALNVDGTTYDETTTYSAKMMDKQTFTSIQATTNTSRYAAGVF
RKGELHVTPLTGILQLRPSFSYLDKADNKTREREAANEGGDSSQDEAEEEAKAITVRFAR
PESEQARRRRIQSYEFLQKKQAEEPWVHLQYHGVKDGRSDHEKQYLFCPSVDASENSELV
KSPKEYLAMLMPPLTEEKVAKPAGPSNVLSMAQLRTLPLAEQVKTLMKNVKVMPFANLMG
LMASGVDQTAVLRCIQQVALLVQGNWVVKSDVLYPKNTCSAHSGVPAEVLCRGRDFVIWR
FTLERSVMRKEIASIIKLPPEDVKEFLEHVAVPRVNRGWEFLLPTDVDFIRKHPDVAHRQ
NMLWLGIQSKLEKVFNVCKEDFLPKNSPQPEPVHISGDQRLKMAQDRAKANQSSLQKDLD
AKHAGNIVHIKQEQSSDREDEPMDTSSSSAPNGSMNGYPASSPCFDQVNGGSPASVPPPQ
LLDFVKKTFRKHFVLTLNELKRLFNLHLASLPSGQSVFHSVSDHLLQDAMLLCQCKQILV
PFPAQSKAAPDEQKVFGLWESGDNFDQHRRLLYDLFTKNFRVRRGMVQTKLSQELGDTSK
ADVDRVLQECCSSHAGCWYLKGTVPS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggccagtggagatgaagatgatccaattatagaggagattgacgtgtacctcgccaaa
agcctcgcagataagctctatcttttccagtatcctgtccggccggctattatgacctat
gacaaagtcactcatctggcggctaagatcaaacccaaacaacagagggtggaggtggac
atatccatggacaccatgagtccaaactactgtcgcagtaaaggagaacaaatagctctc
aatgtggacggcacaacctacgatgaaaccactacgtattccgcgaaaatgatggacaaa
cagacctttacctccatccaggccaccaccaacacctccagatatgcagctggtgtgttc
cgcaaaggcgagcttcatgtcactcctctgacgggaatcttgcagttgagacccagcttc
tcttatctggacaaggccgataacaaaaccagagagcgcgaggcggccaacgaaggtggc
gactcgtcccaggatgaagctgaagaggaggccaaagctattacagtgaggtttgctcgt
cccgagtcggagcaggcccggcggaggaggatccagtcgtacgagttcctgcagaagaag
caggcagaggagccctgggttcacctgcagtaccacggtgtgaaggacggacgctcagat
catgaaaaacagtacctgttctgtccgtctgtggacgcctccgaaaactcagaactggtc
aaatcgccaaaggaatacttagcaatgctgatgccgcctctcactgaggagaaagtagca
aagcctgctgggcccagtaacgtgctctccatggctcagctccgcacgcttcctctggca
gagcaggtcaagacgttgatgaagaacgtcaaagtgatgccttttgccaatctaatgggc
ttgatggcgtctggcgtggaccagaccgcagtgctgcgctgcatccagcaggtggcactg
ttggttcaagggaactgggttgtaaagagcgatgttctgtatccaaaaaacacctgcagt
gctcacagcggcgttccggctgaagtgctctgtcgcggcagagactttgtgatttggagg
ttcactctggagcgttctgtgatgagaaaggagatcgcatccatcatcaaacttcctccg
gaggacgtgaaggagtttctggagcacgtggccgttcctcgggtcaaccgcggctgggag
ttcctgctgcccacggacgtggacttcataaggaagcatccagacgtagcacaccgacag
aacatgctgtggctcggaatccagagcaagttggaaaaggtgtttaatgtctgtaaagaa
gactttttgcccaagaattcccctcagcctgagcccgtccacatcagcggggaccagcgc
ctgaagatggctcaggatcgggcgaaagccaaccagtcgtccctgcagaaggatctggat
gctaagcatgcaggaaacatcgtccacatcaagcaggagcagagtagcgacagagaggac
gagccaatggacacctcctcgtcttctgcccccaacggctcgatgaacggttaccccgcc
tcctccccctgcttcgatcaggtcaacggggggagccccgcgagcgtgccgcctccgcaa
ctgctggactttgtgaaaaagactttccggaagcattttgtattgaccttgaacgagcta
aagcgactctttaaccttcacctggcgtctttaccgtctggacaaagtgtcttccactct
gtctctgatcacctgctgcaagacgccatgctgctctgccagtgcaaacagatcctggtg
ccttttcctgcacaaagcaaagcagctcctgatgaacaaaaagtgtttggattgtgggag
agtggagacaactttgaccagcatcgtcggctgctctacgacctcttcaccaaaaacttc
cgggtcaggaggggcatggttcaaaccaagctgtcgcaggagctcggcgacacgtcgaag
gccgatgtcgacagagttcttcaagagtgctgcagcagccacgcaggctgctggtacctt
aaaggaacggtaccatcctga

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