Oryzias latipes (Japanese medaka): 101170493
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Entry
101170493 CDS
T02443
Symbol
topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101170493 (topors)
03036 Chromosome and associated proteins [BR:
ola03036
]
101170493 (topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101170493 (topors)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101170493 (topors)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101170493 (topors)
UBL E3 ligases
101170493 (topors)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101170493 (topors)
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101170493 (topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101170493
NCBI-ProteinID:
XP_011474337
LinkDB
All DBs
Position
1:15570195..15575199
Genome browser
AA seq
787 aa
AA seq
DB search
MSAVKVALQHAQKNGRRKTSEAMSVEVSPDSKCPICLDGFHNVSYLDRCLHKFCFRCILE
WSKNKAECPLCKQPFNTIYHSIKSEQDFQKYELKQQVENSSFGYFEGVRFRYRTTLTGVH
RQMRGRTSPPPDNGVMFEASAHPPFQRQDRYIRRMMARLAARRRAESEGRTVNNVREQEM
VNFRRELYRQGVRVRNVRDGGRSRDTSAEFYRRNPACLHRLVPWLKRELTVLYGAHGSLV
NIVQHIIMSRITRYDMEDGAIQEELRPFLQARTEHFLHEFISFAKSPFNMEGYDQHAVYD
CPAPSSNEDSNSNSSVIAISEEEENLVEIEQPGGSTSSLSQSVWDDETPGPSYSTTADPG
RISHLSVHDSDSESSSDGGVQEFRAPQQRVSPRNQIDMTQENCNDEDCLSSDSDDCVIIG
FVKPTKERTPELVQLSSDSDESFGEDAKAAALQPKHIRFPSCSPAASLRSECSGSRRTEN
QRNYQYPKSNEECGSSKSSRCKTSKESHNKETDRRHCSEKQPRERYRSKDKEHRRQRRSK
SGEHRQSSRSPDASQSQSIDGSYSYISKDFSKRDRRYKDRGSYYYNQTYSHHRHETDCTR
KQANHHSSYKYSGKHVRSRSGSPSRGTRGRDGTRSPSRTSFSSCSPSSRRKTYCDKPGGK
RKYKTRHLEDPSTQRHHSQDEDEDSVSTAHKKKAKERRHKKSKERQRKNSSSLESKEQRK
HHKKKKKHKKKSRRQRSDEHKNTYLPSVIVMGSKNESSAKNMQVLSTDEEKDTGGSAVNP
VDSDSID
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtcaaggtcgccctgcagcacgctcagaaaaacggcaggagaaaaacctct
gaagcgatgtctgtggaagtgtctcccgactccaagtgtcccatctgtttggacggtttt
cacaacgtttcttacttggatcgttgcctgcacaagttctgctttcgctgcattcttgag
tggtccaagaacaaagccgagtgtccactctgcaaacagccgttcaatacaatctatcac
agtataaaatccgagcaagactttcaaaagtatgaactgaagcagcaagtggagaactcc
tcttttgggtatttcgagggagtgaggttcaggtaccgcaccactcttaccggtgtccat
cggcagatgcgaggaagaacctctccgcctccggataacggggtgatgtttgaagcttcg
gcgcatcctccctttcagcggcaagatcgctacattcggcgcatgatggcgcggttggca
gccagaaggagagccgagagcgaaggcaggacggtgaacaatgtcagagagcaagagatg
gtaaatttccgaagggagctgtacagacagggtgtcagggttcgcaacgttcgagacggc
ggccgctctcgggacacctccgccgagttctaccgcagaaaccccgcctgcctgcataga
ttggtgccctggttaaaaagagaactcaccgtgctgtatggagctcatggctctttggtc
aacatagttcaacatatcatcatgtcacgcatcacacgctacgatatggaagacggcgcg
attcaggaagagctgaggccgttcctccaggctcgaaccgagcacttcctgcacgaattc
atcagtttcgccaagtcccccttcaacatggaggggtacgaccagcacgcagtttatgac
tgtccggccccctcctccaacgaagacagcaactccaactcgtccgttattgccatctca
gaagaagaggagaaccttgtagagatagaacaaccaggaggatctacttcttctctgagt
cagtctgtgtgggatgatgagactcctggtccatcgtattcaacaacagcagatccagga
aggataagtcatctgtcggtccatgactcggactctgaaagcagttcagacgggggcgtt
caagagtttagggctcctcaacagcgagtgagtccaagaaaccaaatagacatgactcag
gagaactgtaatgatgaagattgtctgtcttctgacagtgatgactgtgttatcatagga
tttgttaagccaacaaaagaaaggactcccgagctggttcagctgtcctctgattctgat
gagtctttcggtgaagacgccaaagctgcggctctccaacctaaacacattcgtttcccc
agttgtagtccagcagcttcactgaggagtgaatgcagcggctccagacgaacagaaaac
cagagaaactatcaatatcccaagtcaaacgaggagtgcggctcatcgaaatcaagcaga
tgtaaaacatccaaagagtctcacaataaagagacagaccgaagacactgcagtgagaag
cagccaagggaaaggtacaggtcaaaggataaagagcacagaaggcagagacggtcaaaa
agcggagagcatagacaatcaagcagaagtccagacgcctcacagagtcagtccatcgac
gggagttactcttacattagcaaagacttttccaaacgtgacaggaggtataaggataga
ggcagttattactacaatcagacatatagccatcacagacatgagacagattgcacacgt
aagcaggccaaccatcacagcagctacaagtactctgggaagcacgttcgatctcgctcc
gggagccccagcagggggacaaggggacgggacgggaccaggtctccatccaggacttcc
ttcagcagctgctccccttcgtcgagaagaaagacatactgcgacaagcctggcgggaag
agaaaatacaaaacaagacacttagaggacccatccacacaaaggcaccacagccaggat
gaagacgaggactctgtgtcaactgcacacaagaaaaaagctaaagagaggcgtcataaa
aaatccaaagaaaggcagagaaagaacagcagcagcttagagtcaaaagagcaaagaaaa
caccataaaaagaagaagaaacacaagaagaaaagtagacggcaaaggagtgatgagcac
aaaaatacctacttaccctccgtcatcgtcatggggagcaaaaatgagtcttcagctaaa
aacatgcaggtgttaagcacagatgaggaaaaagacacaggtggttctgctgtcaatcca
gtagactctgactctatcgattaa
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