Oryzias latipes (Japanese medaka): 101170611
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Entry
101170611 CDS
T02443
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101170611 (trpc4)
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101170611 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
Egg_lysin
LHD_TRPY1
BacteriocIIc_cy
DUF6773
Motif
Other DBs
NCBI-GeneID:
101170611
NCBI-ProteinID:
XP_004076346
UniProt:
H2LGM0
LinkDB
All DBs
Position
14:complement(10358773..10392974)
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AA seq
976 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSNLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQYSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLDDEGNNELARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCVFIGLLFPLFAFCYLIAPKSRYGNFIR
KPFIKFICHTASYLTFLFLLLLASQHIVATEQDRQNRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYTKYSGTKPRNQWEMWHPTLVA
EALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDERGKCKGIRCVEQNNAFSSLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
TPFNIIPSPKSFWYLMCWIKRRVCKRTRLKSAENFGTLGRRAAENLRTNHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEDNFKELKQDISSFRYEVMGMMKTGKPALQGAIASGSSVDSN
LAYPNSSLKISTCPAISQVKKKLNRFKITTSLLKQSSSSASPRPPESSNGLLNGLLPLAS
TDSCSQTSRQWRNYPKNNSDFGMFHKLHWGGTDVTGGTGEISREMYCLSEEMGDFGGSDT
DEQSKEAANAAKTDKEPPAIKRKNEAPETKEVSSMKGSFDKNEEKKTAEGNKDPLCTDSG
ADECLPGSTTEDANEM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggaggactgacagctcttcctaccgggatcgcatcccactg
agaattgtgcgggccgagtcggagttgtcaaatctggagaaagcctacctgggagctgtg
gaaaagggggactatgctagcgtcaaacaagctctggaggaggctgagatctacttcaag
atcaacatcaattgcatcgaccctcttggccgcacagctctgctgatcgccatcgagaac
gagaacctggaaatcatcgagctcttgctaagcttcaacgtctatgttggtgatgctctt
ctgcacgccatccgcaaggaagtggtaggagccgtggagctactgcttaatcacaagaag
cctagtggaggcatgcaggtccctcctatccttttggacaagcagtactctgacttcacc
cctgacatcactcctatcatccttgctgcacacaccaacaactatgaaattatcaagctc
ctggtgcagaaaggagtgtcaatgcctcagccacatgaggtgcgctgcaactgtgtggag
tgtgtgtctagttcagatgtggatagcttgcggcactcgcgctctcgcctcaacatctac
aaagcactgtcgagtccctctctaattgcactctccagtgaagaccctttccttactgca
ttcaggctgagctgggagttgcaggagctcagcaaggttgaaaacgagtttaagtcagag
tatgaggagttgtctcagcagtgcaaacagtttgccaaggatcttctggatcaaaccagg
agctccagagagctggagatgattctaaactacagagatgacatcaatttattagacgat
gaggggaacaacgaacttgcgagactgaaactggcgatcaagtaccaccaaaaagagttt
gtagcccagcctaattgtcaacagttgttggcgtccagatggtacgacgagtttccgggc
tggaggcggcgccactgggcaggaaaattaatcacttgcgtcttcattggcctcctcttc
cctctgtttgctttctgctacctcatcgctcctaagagccgctatggcaacttcatccgc
aagcccttcatcaagtttatctgccacacagcatcctacctgacgttcctgttcctgctg
cttcttgcctcccagcacattgttgccacagagcaagaccggcagaacaggcagggacca
gcaccaaccaccgtggagtggatgatcttgccatgggtgctgggattcatttgggcagag
atcaagcaaatgtgggatggtggatttcaagactacatccatgactggtggaacctgatg
gactttgtgatgaactctctatacctggccaccatctcccttaagattgtagcctacaca
aagtacagtggaactaaaccgaggaaccagtgggaaatgtggcatcctactttagtagct
gaggccttgtttgccatagcaaacatcttcagttccctgcgcctcatctcgctcttcaca
gctaactcacacctgggacctctgcagatctctcttgggcgaatgctgctggacatcctt
aagttcctcttcatctactgtctggttctgctggcttttgctaacgggctgaaccagctg
tacttttactatgagacaaaggcttcagatgagagagggaaatgtaaaggcattcgctgt
gtggaacagaacaacgctttctcttcgttgtttgagacactacagtctcttttctggtcc
atctttggccttatcagcctctacgtgacgaacgtggatgcagaccaccagttcactgag
tttgttggtgccaccatgtttggaacttacaatgtcatatctctggtggtgcttctcaac
atgctcatcgctatgatgaacaactcctaccaacacatcgctgatcatgcagatattgag
tggaagtttgccaggacaaagctgtggatgagctactttgaggaaggagctactttgccc
acaccttttaacatcattcccagccccaaatccttttggtacctaatgtgttggatcaag
aggcgagtgtgcaaaaggacaaggctcaagagtgcagaaaattttgggaccctggggaga
cgagcagcagaaaacctcaggacaaaccaccaatatcaggaggttttaaggaacctggtg
aaacgctatgtggctgccatgatcagagatgcaaagacagaagagggactaactgaagac
aactttaaggagctaaagcaggacatctccagtttccggtatgaggtgatgggcatgatg
aagacgggaaagcctgctcttcagggtgcaatagccagtggcagctctgtggattctaat
ctcgcctaccctaattcctcgctcaagatttctacctgcccagcaatcagccaggtgaag
aaaaaactaaaccggttcaagatcaccacatcccttttaaagcaaagcagctcgtcggct
tcacccaggccccctgaatcctccaacggcctgcttaatggcctcttgcctctggcctca
accgacagctgcagccagacgtcaagacagtggaggaactaccctaaaaacaatagtgac
tttggtatgtttcacaaactccactgggggggcacagatgtcacaggaggcacaggggaa
atttccagggaaatgtactgtttatcagaagaaatgggagattttgggggttcagacaca
gatgaacagagcaaggaggctgcaaatgcagctaagactgacaaagagccaccagcaatt
aaaagaaagaatgaggctccagaaactaaagaggtgtcaagcatgaagggcagctttgat
aaaaatgaagagaagaaaactgcagaaggaaataaagatccactttgcacagactctgga
gctgatgaatgcttgccaggatccaccactgaagatgcaaatgagatgtga
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