Oryzias latipes (Japanese medaka): 101170774
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Entry
101170774 CDS
T02443
Symbol
rabgap1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170774 (rabgap1)
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101170774 (rabgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
101170774
NCBI-ProteinID:
XP_004075008
UniProt:
A0A3B3HKW2
LinkDB
All DBs
Position
12:15330106..15389259
Genome browser
AA seq
1091 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVHEDALGSERRLDGVCGDGSSPHLNRPSPVLPGLDPL
SAPPPKLEMVLPVQTPQESELNERSYRADESSSEGSPCSPIPDEDSVVFSQLTYLGCASV
NAPRSEVEALRMMSILRGQCQVPLDVTLSVPGVSEGTVRLLDPHNNTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIREAVSRILYSFATAFRRSAKKSVLSS
QQAPPLTPDSDLFTFTVSLEIKEDDGKGTFSAVAKDKDKQSFKLRAGMDKKIVIYVQQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQAVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRSFTETFYLKLR
QMERKERKSPASDTLYEVLSLESESEREKRKTTASPNIVLGGAGTGAPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGDLLSKWHMNLSVRPKQLPALVRSGIPEALRGEVWQLL
AGCHNNDHLVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQECIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIMDLLLCEGISVIFNV
ALALLKTSKDDLIQSDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKFEK
EYHTMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEE
KADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQ
ICSQLSERLEKQQTATRGELEKIRSKVEGCEKCSSLFNKEGRVRATVTTAPAGGTEETDE
EKESLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIK
TVTGTQGKDTA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctcagtggggaagattagcgtgtcttcagactcagtgtccactctc
aacagtgaggactttgtcctcgtgtcccggctgggggatgagacaccctcttctactaat
aatggtagtgatgatgagaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatgggagtgagcagcagctgcaacgggagttagaggacgtcctcatg
gacccgtcggtgcatgaggacgcgctgggatccgagcggagactggacggtgtttgtggc
gacgggtccagccctcaccttaataggccgtcgcccgtactgccaggcctggaccctctg
agcgcaccgccccccaagttggagatggtgcttcctgttcagacgccccaggagagcgag
ctgaatgagaggtcttacagagcagatgaatcctcttcagaaggcagtccttgcagtccc
attccagacgaggacagcgttgtgttcagccagctcacatatcttggatgtgcctcagtc
aacgccccccgcagcgaggtggaggctctgcgaatgatgagcattcttagggggcagtgc
caggtcccactggatgtaaccctgtctgtgccaggcgtgtctgaaggcaccgtcaggttg
ttggatccccacaacaacacagagattgccaactaccccatctataagattctgttctgt
gtgcgaggccatgacggcacgccggagagtgactgctttgccttcacagagagtcactac
aatgcagagatcttcaggatccacgtgttccgctgccaaatacgagaggcggtgagtagg
atactgtacagttttgccactgcttttcggcgctctgcgaagaagtcagttctgtcatcg
cagcaggctccgcctctcactcctgacagtgatctgttcacctttacggtcagcctggag
attaaggaggatgatggcaaaggcaccttcagtgctgtagcaaaagacaaggacaaacag
agcttcaagctgcgtgccggaatggacaagaaaattgtcatttatgttcagcagacctcc
aacaaggaactggcaatcgagaggtgtttcggactgctgctcagcccggggaaaaatgtg
aaaaacagcgacatgcacctgctggatctggagtcaatgggaaaaagctcagacggaaag
tcttacatcatcacaggaagttggaaccccaacacgcctcagttccaggctgtaaacgag
gaaacacccaaagataaattcatgtacatgacgacagcagtggacctggtcatcacagag
gtcgaggagccggtccgttttctgctggagacgagggtcagagtgtgctcgcccaatgac
cggctgttctggcccttcagcaaacgcagcttcaccgagaccttctaccttaaactgcga
cagatggagcggaaagagcgaaagagtcctgcctctgacacactttatgaggtgctgagt
ttggaaagtgagtccgaaagagaaaaaaggaaaaccacggcgagtccaaacatcgtcctg
ggtggagctggcaccggggctccatcgccaccagaggatgatgaggaggaagataacgac
gagcccctgctgagtgggtcaggagacgtttcgaaggaatgtgctgagaagatactggag
acctggggagacctgttgtccaagtggcacatgaacctatcggtgcgtccaaaacagctg
ccagctttggtgcgaagcgggatccctgaggcactccgcggggaggtgtggcagcttctt
gcaggttgtcacaacaatgaccacctggtagaagagtatcggactctgattacaaaggag
tctccccaggacagtgcaatcaccagggacatcaacaggacgttccctgctcatgactac
ttcaaagacaccggaggagatgggcaagactccctctacaagatctgcaaggcttactct
gtttatgatgaagagatagggtactgccagggacagtctttcttggctgcagtgctgctc
ctacacatgccagaggagcaagcttttagtgttctggtgaagatcatgtttgattatggg
ctcagggaccttttcaaacagaactttgaagatctgcactgcaagttcttccagcttgag
agactcatgcaggaatgtataccggatctatataaccatttcctgaatgtgggcctggag
gctcatatgtatgcttctcagtggttcctcaccctcttcacagccaagttccctctctac
atggtcttccatataatggacttgctactgtgtgagggaattagtgtgatttttaatgta
gccttggctcttctaaagacgtcaaaagacgatctaatccaatcggacttcgaaggcgca
cttaagttctttcgtgtcccggtcccaaagaggtaccgctctgaggaaaacgccaagaaa
ctgatggagctggcctgcagcatgaagatcagccagaagaagttaaagaaatttgagaaa
gagtatcacaccatgagggagcaacaagagcagcaagaagctccgattgagagatacgag
cgagagaaccgacgcctgcaggaggccaacatgcgcttggagcaggagaacgacgacttg
gcccacgaactagttagcagcaagatcgccctgagaaaagacctcgacaatgctgaggag
aaggcagacgccctgaataaagagctgctgctgaccaaacagaagctggtggactcggag
gacgagaagaggagactggaagaggagtccgctcagctgaaggagatgtgcagacgggag
ctggataagtcggaatctgagattaagaagaatggttccatcattggggaatataaacag
atttgctcccagctgagcgaacgcctggagaagcagcagacagccaccagaggggagctg
gagaaaatccgatccaaagtcgaaggctgtgagaagtgcagcagcctcttcaacaaggag
gggcgcgtgcgggccaccgtgaccacggcgcccgccgggggaacagaggagacggacgag
gagaaggagagcctgaagaaccagctcagggagatggagctggagctggcgcagaccaaa
ctgcagctggtggaggcggagtgcaaaatccaggacctggagcaccatctgggtttggct
ctgaatgaggtgcaggccgccaagaagacctggttcaaccgaacgctcagctccatcaag
accgtcaccgggacccagggcaaagacaccgcctaa
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