Oryzias latipes (Japanese medaka): 101170785
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Entry
101170785 CDS
T02443
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170785
Membrane trafficking [BR:
ola04131
]
Protein recycling
Others
Others
101170785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
101170785
NCBI-ProteinID:
XP_023818885
UniProt:
H2LND0
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Position
15:19665397..19729524
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AA seq
1240 aa
AA seq
DB search
METRLGKWGFTPFPGWIWLLIITSLLGGTKAEVRCIPSCQLPLNSASYWEPNELDLADFG
AAAAEDLVGISEGSLDASGDERHNAVELSAEEESSFNVQLQIEETFTNSMRRDNLKGHPK
LSQLSGSALREPDLPFKNKNDSSNSDDTFHGIYAPNGDIPMMENRDVATWRRLRRARSAE
TWSGFRAEGVDDAPILDQEEFQLTSSIFALSGDTAHNQAMVHWSGENSSVILMLTKYFDF
NSGRVTESSLWRSTDYGTTYENLNEKVGSKTILSYLYVSPNNKRKIMLLTDPEVESSLLI
SLDEGATYQKHGLTFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQFVHDNVVPNR
FYWSRLGLDKEQGLIHLEIQVSDGRSQYVTCKLQNCSDGNKGKPFPGFIIPNSLVVQDEY
VFIQVSVGGQSVHYVSYKRNAFYPMKLPKYALPKDLQIISTDDNQVVAAIQDWHQNDSYN
LYMSESRGLFFMLMLEDVVSSGGPEDNVMIDLYEVAGIKGVFLSNKLVENQVKTYITYNK
GRDWRLLQAPATDLQGNKVYCEQPYCSLHLHLHVSENPYASGNIVSKDSAPGVIIASGVV
GPELINTNVSIFITSDAGNTWKEVFQEEYSVFFLNQGGALVAIRHTPLPIRHIWLSFDEG
GNWDKYSFTSSPLYVDGVLGEPGEDILIMTIFGHFSHRAEWQLVKIDFRSIFQRRCGSED
YVTWQLHNQGEVCIMGMKRFFQKLRANVQCVKAGDQFISQMSDSCLCTEADFECDYGFER
QVDGSCAPAFWFVPSATSPDCTTGDTFLNTTGYRKALSNKCTGASLSKYSPRQEKCPSQA
PKGLQLFTSEGTLVATLGSNVTFLVFLEEGLGSMTSVTVDFGDGTAISYVNISSIDDGVK
HIYSKVGIYQVSATASNNLGSDRVILYLHVSCQLEQVELMAPLVVVKNRAVNFTTVLHPA
NVGTITYFWWFDNKTEPIVTLDGAVSFAFSKEGYHSVTVQALAGNAVHQDQRMVAVYDYF
QSHVLAFSSNLDDLNPGVSEWREDVSRVVKSRMVQVTGISEKQLLVAVLPGVPTTAEIFI
VSERASAERQLNEKWVHLSQLSQVLLSALNQDLIQFTLKPGVQVNVYATWLSPAPLVDSG
DSLHSGIAVIMLVSVVLAILAVFLVYKFKRKFPGMNTYATEQPDKEQEVIPAVTSLAVPD
PEEDKMTSLVHVDVQLDSKSRGYLPSHTDIKLSDEAPHVF
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgtcttggtaagtgggggtttacccctttccctgggtggatttggctcttg
atcataacttccctcctgggtggaacaaaagcggaggtgaggtgcattccctcctgtcag
ctgccgctaaactcggcatcgtactgggagccaaatgagttggatttggcggattttggc
gctgctgctgctgaagatttggttggaattagcgaggggtcactcgacgccagcggggac
gaaaggcacaacgcggtggaattaagtgctgaagaagaaagttcattcaacgtgcagctg
caaattgaggaaacatttacaaacagtatgcggagggacaacttaaaaggtcatccaaaa
ctttcccagctttctggaagtgctttacgcgagcctgacctcccctttaagaataaaaac
gacagcagcaacagtgatgacacattccatggcatttatgccccaaacggggatatcccg
atgatggaaaacagagatgtggccacatggagacgattgcggcgcgccaggagcgcggag
acttggtctggattcagagctgagggcgtggacgacgcaccaattctggatcaggaggag
tttcagctcacaagttcaatatttgctcttagcggagacacagctcacaaccaggcgatg
gtgcactggtccggggaaaacagcagcgtgattctcatgttgacaaaatactttgacttc
aactctggcagagtgacagagagctctttgtggagatcaacggattatgggaccacatat
gaaaaccttaatgagaaagttggtagcaaaaccatactgagctacttgtatgtgagtcca
aacaacaaaaggaagataatgttactgactgacccagaggtagagagcagcctgctcatt
agcctcgacgagggggcgacctatcagaaacacggcttaacctttgatatcctcagcctg
ctttttcatcccgagcaggaggattggatcttggcttacagccacgaccaaaagctctat
gtgtctgttgagtttgggaggagatggcagtttgtgcacgataacgtcgtccccaacaga
ttctactggtccaggctaggtttggacaaagagcaaggactgattcacctggagatccaa
gtttctgatggacggtcacagtatgtaacttgcaaactccagaactgctctgacggaaac
aagggcaagcctttccctggatttatcatcccgaactccctcgtagttcaggatgaatac
gttttcatccaggtatcagtaggtggtcagtctgtccattatgtgtcatataaaagaaat
gctttctacccaatgaagctccctaaatacgctcttcccaaggatctgcagataatcagc
acggacgataaccaagtggtggcggcgattcaggactggcatcagaacgattcctataac
ctgtacatgtctgagtccagagggctgttcttcatgctgatgctggaggacgtagtgagc
agtggaggacccgaggacaacgtcatgatagacctctatgaggttgccgggattaaaggg
gtgttcctgtcaaataaacttgttgagaaccaagtgaaaacttatatcacatacaacaag
ggaagagactggcgtcttcttcaggctccagcaaccgatctccaaggaaacaaggtctat
tgtgaacaaccctactgttcgctgcatctgcaccttcatgtttcggaaaacccttacgcc
tcgggaaatattgtcagtaaagattcagctccaggagttataatagcgtcaggtgtggtt
ggacctgagctgatcaataccaatgtcagcattttcattacatctgatgctggaaacacc
tggaaagaggtttttcaggaagagtacagtgtgtttttcctgaatcaagggggggccctg
gtggccatcagacacacccctctgccaattagacatatttggctgagttttgacgagggc
ggaaactgggacaagtatagcttcacctcctctcccctgtatgtcgatggagtgcttgga
gagcctggagaagacatcctcattatgacaatatttggtcatttcagtcacagggctgag
tggcagcttgtcaaaatcgactttcgctccattttccaacgtcggtgtggatccgaagac
tatgtcacatggcagttacacaaccagggggaagtgtgcatcatgggaatgaagagattc
tttcaaaaactgagagcgaacgttcaatgtgtcaaggccggagatcaatttatttcccag
atgtccgactcctgcctgtgcacagaagcggactttgagtgtgactatgggtttgagagg
caggtcgatggaagctgtgctccggctttctggtttgttccttcagcaacatctcctgac
tgcacaacaggggacaccttcctcaatacgacgggataccgaaaagctctttccaacaag
tgcaccggagcaagtctttcaaagtacagccccaggcaggagaagtgtcccagtcaggcc
cccaaaggtctgcagctcttcaccagcgaaggaacacttgtagcaactctggggagcaac
gtgaccttcttagtctttctagaagagggtcttggctccatgacaagtgtaacagtggac
tttggtgacggaacggcaatatcctacgttaatataagctccatcgatgatggagtcaag
catatctacagtaaagtggggatttaccaagtttcagctacagcgagcaataacctgggt
tcagatagagtcatcctctacctccatgtgtcctgtcagctggagcaggtggagctcatg
gctcctttggtggtggtcaagaacagagcagtaaatttcacgacagtgttgcatcccgct
aacgtgggaacgatcacgtatttctggtggtttgacaacaaaactgagccaattgtgacc
ctcgatggagccgtttcctttgctttctccaaagaaggctatcacagtgtaaccgttcag
gctctagctggaaatgctgtccatcaggaccaaaggatggtagcagtttatgattatttc
caatcacacgttttggccttttcttctaatctggatgatctgaacccgggggtgtccgag
tggagggaggatgtcagcagggttgtgaagagccgcatggtccaggtcacaggaatcagt
gagaaacaactcttggtcgcagtccttccaggcgtaccaaccacagcggagattttcatc
gtgtctgagagggcgtcagccgagaggcagctgaatgaaaagtgggtgcacctgagtcag
ctttctcaggttctgctgagtgctttgaaccaagacctgatccagttcacgctcaaaccg
ggggtgcaagttaatgtctatgccacctggctgtctccagctcctcttgtggacagtggt
gacagtctgcacagtggtattgcagtcatcatgctagtgtcggtggttctggcaatcctg
gcagtctttttggtatataaatttaaaaggaagtttccaggcatgaacacatacgccaca
gagcagccggataaagagcaagaggtgatccctgcagtgacctctttagcagttccagac
cccgaggaggacaaaatgacctccctggttcatgtggatgtacagctggactctaaaagc
agaggctacctgccatctcacacagacatcaagctctctgacgaggcgccccatgtgttt
taa
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