Oryzias latipes (Japanese medaka): 101170854
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Entry
101170854 CDS
T02443
Name
(RefSeq) DNA-binding protein SATB1
KO
K23225
DNA-binding protein SATB1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101170854
03036 Chromosome and associated proteins [BR:
ola03036
]
101170854
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
101170854
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101170854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ULD
CUTL
CUT
CTNNB1_binding
Motif
Other DBs
NCBI-GeneID:
101170854
NCBI-ProteinID:
XP_011479157
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All DBs
Position
11:10933673..10947846
Genome browser
AA seq
892 aa
AA seq
DB search
MDPLCNEIKKAEGGELAVDPGPRPNKLARLEQHEMGPSTPEWSRQGSPVAKTPGIAQKPA
TARSTGRNWHTKGSLLPVFCVVEHRETVLEVEKNEEHAEFVLVKRDLLFNQLIEMALLTL
GYSHSSAAQAKGLIQVGRWNPVPLSCVTDAPDATVADMLQDVHHVITLKIQLHSCPKLED
LPPEQWSHSTVRNALKELLKEMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCHEFGR
WYKHFKKSKYFKEIDSFSEQSTHLTLTPQPVTGSPADQTSLLFPRGAMTNICGHSGLGLH
PPGLVTQPLSPQMAKQQLVMVQYLNQQFAVSRMLAGQGLPSAPQQYLNHPPVGRTPAKVF
SKAPDSQTSQQPQCGLGGGSSTGLQSQTPTGSSVGSADVPADIYQCVREELKRAGISQAI
FARVAFNRTQGLLSEILRKEEDPKHASQSLLVNLRAMHSFLQLPEAERERIYQEEKERSL
TGYTPSCNNTPPLSTQARLSPVTSERGLRTDSCVLHVNGSIYEEIQHEMKRAKVSQALFA
KVAASKSQGWLCELLRWKEDPCPENRTLWENLCMIRRFLSLPQTERDAIYEQESNNMTSQ
QHCTDKLTLLNNDNTLYQRNSVMPQQHHLQPLQPLQPETSPHLSPRQPCAASPAESEAGA
TWGHFRVRLQRRSSCSVERGDTKDWIDGSPMDIENMGGDWGGIGTVRDKGGAQWGDVNVK
GDTGEITGDRKIVNIKEKLYAKLTRMRSDEKGEAVGCSKTHFKEDIQLDELNVSSDALVI
LQSFIQDVGLNPDEEAVHTLAAQLGLPKHTILNFFNSQDQGQRQHYYHSPTCGQEDQKGW
TKADLSRADLPTPELKRDGNATKQNGQIIGVRESDVSTQTVPQIKEEQESGI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatccactgtgcaatgaaatcaagaaagcagagggaggtgagctagctgtagaccct
ggaccccgtccaaataagctggctcgactggaacaacacgagatgggaccctccacacca
gagtggagcaggcagggcagtcctgtggccaaaacccccggtattgcacaaaaacccgcc
acagcaaggtcgacaggcagaaactggcacaccaaaggaagcctgctgccagtattctgt
gtggtagaacacagggagactgttttggaagtcgagaaaaatgaagaacatgcagagttt
gtgttggtcaaaagagacctgctgttcaatcagctgattgagatggccttattgacgctg
ggatattctcacagctctgcagcacaggctaaaggtctgatccaggttggcaggtggaac
ccagtacctctgtcctgtgtaacagacgctccggatgctacggtggctgacatgctgcag
gatgttcaccatgttatcaccctgaaaatacagctgcacagctgtcctaaactggaagac
ttgccgcctgagcagtggagtcactccactgttagaaatgctctgaaggagcttctgaag
gaaatgaaccagagctctctggccaaggagtgtccactgtcacagagcatgatatcatca
attgtaaatagcacttactatgcaaacgtctcagctgccaagtgtcacgagtttggccga
tggtacaagcacttcaagaagtccaaatacttcaaggagattgacagtttttccgagcag
tccacacacctcacgctaacgccacagccagtaacgggtagcccagctgaccagacctct
ctgcttttccctcgtggagcaatgacgaacatttgtggtcattctggccttggtttgcac
cctcctgggttggtaactcagcccctcagtccccaaatggccaaacagcagctggtgatg
gtgcagtatctcaaccagcagtttgctgtgagccgcatgttagctggccagggcctccca
tccgcaccacagcagtatctcaaccaccctcctgtgggaaggacgcctgccaaagtattt
tctaaagcccctgattcccaaacctcacagcagccacagtgtggccttggaggaggttca
tccacagggctgcaaagtcagacaccaactgggtcttctgtcggctcagcagacgtacca
gctgacatctaccagtgtgtgagggaggagctgaagcgagcgggcatctctcaagccatt
tttgcccgagtagcttttaacaggactcagggcttgctgtctgagatcttgcgaaaagag
gaggatccaaagcatgcctcccagtctctgctggtcaacctgcgagccatgcacagcttt
ctacagctcccagaggctgagagggagcgcatataccaggaggaaaaggagcggagtttg
actggatatacacccagctgcaataacacacccccactgtccacacaggcaagactttcc
ccagttacatctgagagagggttgaggacagacagctgcgttctccatgtcaatggctcc
atatacgaggagattcagcatgaaatgaagagagccaaagtgtctcaggctttgtttgca
aaggtcgctgcttccaagagtcagggctggctgtgtgagcttctgcgctggaaagaggac
ccctgcccagaaaaccgcactttatgggagaacctgtgcatgattcgccgatttctcagc
ctaccccagactgaaagggatgctatttatgagcaagagagcaacaacatgacttcacag
cagcattgcactgacaagctcacactactcaacaatgacaacacactgtaccagcgcaac
tctgtgatgccacagcaacaccacctccaacccctgcaaccccttcagccagaaacatca
cctcacctgtctccacggcaaccgtgtgctgcatcaccagctgagtctgaggctggggcc
acctgggggcatttccgagtacgtttgcagcgcagaagcagttgcagtgttgaaagaggg
gataccaaagactggattgatgggtcaccaatggatattgagaacatgggtggggactgg
ggcggcattggaacagtgagagataagggcggtgcgcagtggggtgatgtaaatgtaaag
ggagacactggtgagatcactggagacaggaaaattgtaaatattaaggaaaaactttac
gcaaaactcacccgaatgaggagtgacgagaagggcgaagcagttggttgttccaagaca
cattttaaagaggatatccaactggatgagcttaacgtgtctagtgatgccctagtaatc
ctgcagagcttcatccaagatgtgggcctcaatccagatgaggaagcagttcacaccctt
gctgcacagctgggcctgcccaaacacaccatccttaacttcttcaacagccaggaccaa
ggacaacgccaacattactaccacagtccaacatgtggccaagaagaccagaaaggctgg
actaaagctgacctctcacgtgctgacttgcctactcctgaactgaaaagggatggaaat
gcaacaaagcaaaatggtcagattattggtgtcagagaatcagacgtcagcactcagact
gttccccaaataaaagaagagcaggagagtggcatctga
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