Oryzias latipes (Japanese medaka): 101170858
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Entry
101170858 CDS
T02443
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101170858 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101170858 (nup214)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101170858 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
ANAPC4_WD40
WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WD40_CDC20-Fz
Filament
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
101170858
NCBI-ProteinID:
XP_011480024
LinkDB
All DBs
Position
12:complement(10676553..10700887)
Genome browser
AA seq
1992 aa
AA seq
DB search
MSDDADSPPERLMKDFQFRQLKKVEVFEPPEHLPKDRSSLLTVSNKYGLTFVGLERTFKV
YQTQDILSADKADPGFIVKGTPPLATVTVELALHHLALSCDELTLSVCGVEEENLFLTFY
DVRTFINGKSTQKLPFATFRPDVPPGTLVQDLKWNPANVSMLAACLSDGSMMILDVTDLV
KMQAKLPSTSGITCIGWSPKGKQVAAGKMNGTVSQYTPALEEKKVIPCPHFYTSEDPVKA
LDVLWLRTFAFAVTYAAADGSLETPPELVLVSLPKKDEKVDTKYLNFGDIVYGTCTERQH
HYFLSHIEDWDLVFAASAASIEVSVIARQDDKMWELWILEDAGRAELRVTESNEDTLPLG
LAIDYTSQQEIYITDEKTLPPAPTLMMLSTEGLLCSFALVNQNPGAKQLVSPPTMLTPEG
ERLPKPGEKAVMERVAGVSFGHPRSVATAPAKIPAAVPSAPPAFPSISLASSAAAPSPPV
SSAPSSIIPFSMAPTAPVTSAFSGFSFSVPSTFSTTSAPVAAFALGGSVPFGSGSSGFSF
ASKPPSETPSALSAFSFNSPSGKPPAVAAPSAAVAPQSLSTASPPTVKLSLNERFSGVEA
SAPAFSLPKAVVSSSSSFNVPPISASKPPAVCAPVHPVQTSTPPASVQKPAPAVQGRVST
MQQAVSVKALEKQLQQKKDSDPIMAGILEEIAHFQKELDDLKARSSKADVRVGTNDDMKD
LRKESEDLHIFTLEIKETTESLHGDIGTLKTTLLEGFAGAEEAKTQNELGKDKNYRQLLY
KKPLDPRSEEQLKEIRRLYQYVKFAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFN
TLSNNLCIINQQKNRLDQLIQELSALRLYSKTTAPTINQNTAATSDDYKGELENLEEALL
KARLETTPPETKVKSAAVKVSPLKQSQLRNFLSKGKMPPVRSTAPANLSRSAFLAPKNLE
DLDDVSSTSSLSQSIELLPSHLELEEEEELQPLQPSPMNSMTQSLPTPRHPTVVRTPSIQ
PGFGAIQSTPLTKMHPVPGMGFVLSPIINPVPTNRINLSGAESTALATKTVKHGAPPAER
SIPVTISAQQAAATAALRRQMANQKTAVVNTSLTESTLKTVPQVVNVQELKDKGAPMPVS
SMVSSSAPDPSVQGFTAVSSSQVKRNTPGLQKIPTENASIPQTGFVFGQPSKTDLSGGPP
SSLEQNTSKAFSFTSGSTGFSFSSVTQGAGLSQGKDVNKFSIGGNGKGLFGQTGEEPFSL
PTKSNSPGLSNGSSSSSANSLGEVAKQGSTVTGSKTEPQPLKAAGGETLGSFSGLRVGHG
EEANESSTKTTAPAFSFGNAGLGHSKSAPQFNFGSTPLKSAEDGAAADMPKVSGSGSLFK
PPDSNSMPTFSITPSTTAASALPTSLSSLLAAPTEQPKATQQPSESTSAALPELSTKELA
VDLASVPAEPEPLVTAVATTTTPTSAAPTLPMVTPVPTADSSSTVPAETETTLPPAPPTA
SSTEEATPDPSSTPAVSTSTTAVPLTIEVTSAALPASSSEKPGSIFTSATPATTTSNSVG
AIPAINTAAPTTTTAAVITSAATTAANVFGQPAAPPASSAPATTGFGSSGFGAPTETGFG
KSVFGVGGFGQPASIGGTSSGFSFTQSAFGASSSSATTGGGGLFGAPTVTNASSFSFGTS
SSSTPSSTGLFSQSTPSVFGQSSGFGQGSMFRNNTTTSSASGFSFGQPSGFGCSAATPVF
GQQSTTGSIFGQQQQPSTGGGLFGQSSTGAATSSSGGFFSGLGGKPSEDAANKNPFGTTA
STGVFGQSTQSGPNSLFGSSSAKTFGFGQPSFGEQKPSGTFSTGGGSVACQGFGSFSTPS
KSTSGFGSAPVFGSPPSFGGSPAFGGGASFSSSPSFSNPLASQSSKVFGEGTAAASMGGF
GFSSPPSAPSFGTLATQTAPSFGSLAQQGPGFGSQPSSFSGFGQQPQTGGFSGNAFGSPN
PPGAPSFGSWRS
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgatgcagactctcctcctgagaggttaatgaaggactttcagtttcgtcaa
ttgaagaaggttgaagtttttgagccgccggaacatttgcctaaagacagatctagtctt
cttactgtatctaacaaatacggattaacattcgtgggactcgagagaacatttaaagtc
taccaaactcaagatattttgagtgctgataaagcggatcctggtttcatagtcaagggc
acaccaccattagctacagtgactgtggaactggctctgcatcatttggctctcagctgt
gatgaacttacattgtcagtttgcggtgtggaagaggagaatttgtttctgacattttat
gatgttcgcaccttcatcaatgggaaatcaacacagaagttgccttttgcaacctttcgg
ccagatgtgccacctggcactttggtgcaggacctgaagtggaatccagcgaatgtctct
atgctggctgcttgtctgtctgatggcagcatgatgattctggatgttacagatcttgtg
aaaatgcaggctaagctgccctccacaagtggcatcacatgcatcggttggagtccaaaa
ggaaagcaggttgctgcaggaaagatgaatggcactgttagtcaatatacaccggcactg
gaagaaaaaaaagtcatcccgtgtccacacttctacacctctgaggaccctgtgaaggct
ctggatgttctctggctgagaacatttgcattcgcagtgacatatgctgctgcagatggg
tctttagagacccctcctgagcttgtgttggtctccctgcctaaaaaggatgaaaaggtg
gataccaagtatttgaattttggtgacatagtgtacggcacctgcaccgaacgacaacat
cactacttcctaagtcatatagaggactgggaccttgtttttgcagcgtcagccgcttct
attgaggtcagcgtcattgcaagacaagatgacaagatgtgggaactgtggatccttgaa
gatgcgggtagggctgaactacgagtgaccgagtcaaatgaagacactctgcctcttggt
ttggcaatagactacaccagccagcaggagatctacattaccgatgagaagaccttacct
ccagcacccactctgatgatgctgtccacagagggattgctctgctcatttgctttagtc
aaccaaaaccctggggccaaacagcttgtctcaccccctacaatgctgacccctgaaggg
gagaggctaccaaagccaggtgagaaggctgttatggagagggttgcaggtgtgagtttt
ggtcatcctcgttccgtggcaacagcaccagccaagattcctgctgcagttccttctgct
ccacctgccttcccgagcatcagcctcgcttcttcagcagctgcgcccagtcctccagtc
tcttctgctccgtcctccattattccttttagcatggctccaacggctcctgtgacatca
gccttctccggctttagtttctcagtcccatcaaccttctccaccacctctgccccagtt
gcagctttcgccttgggaggatctgtgccttttggctcagggtcctctggcttctcattt
gcctccaaacctccgtctgagaccccgtccgcactctcggcgttttcgtttaattcccct
tccggcaaaccaccagcagtggctgccccgtctgctgctgtggcacctcagagcctttca
acagcctcaccgcccacagtcaaacttagtctgaatgaaagattttcaggggtggaggct
tcagctccggctttctctttgcctaaagctgttgtttccagctccagtagtttcaatgtg
cctccaatctcagcctcaaagccgccagctgtatgcgctccagtgcacccggtgcagact
agtacacctccagccagtgtccagaaacctgctcctgctgtccaaggacgtgtctctact
atgcagcaagccgttagcgtgaaagccctggagaaacagctgcagcaaaagaaagactct
gatcccattatggctggaattttggaagagattgcacattttcagaaagagttagatgac
ctgaaggcacgcagttcaaaagctgacgtcagggtcggcacaaacgatgacatgaaggat
ctgaggaaagagtctgaggacctccacatcttcactctggagattaaagaaacgacagag
tctctccatggtgacattggcacgctgaagaccacattactggagggctttgctggggcg
gaagaagccaagacgcagaacgagctgggaaaagataaaaactacagacagctgttgtac
aaaaaacctctggatcccagaagtgaggagcaactcaaggagattcggaggctgtaccag
tacgttaaatttgctgtggaggatgttaacgacgtgttggatgtggaatgggagaaacac
ctggagaaaaagaaaaagcaaaaacacatggtcgtgcctggacgtgagggtcttttcaat
acattgtccaacaacctgtgcatcatcaaccagcagaagaaccgactggatcagctgatt
caggagctcagtgctctgcggctctacagcaaaaccactgctcctaccattaaccagaac
actgcagcaacatcagatgactacaaaggtgagctggagaatttggaggaggcacttctg
aaagcccggcttgaaacgactcctcctgagacaaaagtgaaatcagcagcagtcaaggtt
tctcctcttaaacagtcccaactgcgcaacttcctgtcaaaagggaaaatgcctcctgtg
cgttcaactgcaccagccaacttgtcgcgctcggccttcctggcccctaaaaaccttgag
gacttggatgatgtgagctcaacgtcctccttatcgcagtctatagagcttctcccatct
cacttggagttggaggaagaggaagaactacagcccctgcagccttcacctatgaattcc
atgacccaatcacttcccaccccacgtcaccccactgttgttcgaacgccctccattcag
ccaggctttggagctatacagtccacccctctaacaaagatgcaccctgttcctggtatg
ggctttgtgctaagccccattatcaaccctgttcctacaaataggattaacctcagcggg
gctgaaagtactgcgcttgccacaaagacggtaaagcatggagcaccacctgcagagcgg
agcatccctgtgaccatctctgcccagcaggctgctgccaccgcggctctgcggagacaa
atggccaatcagaagacggctgttgtcaacacttctttgacagagtccaccttaaaaact
gtccctcaagtagtgaatgttcaggagcttaaggacaaaggggcacctatgccagtgtcc
tctatggtcagctcctcggcgccagatccctcagtccagggcttcacagcagtttctagc
agccaagtcaaacgaaacacaccgggtctgcaaaagatacccacagagaatgcatctatt
ccacagacaggctttgtctttggccaaccatccaaaacagacctttccgggggtccacct
agttcacttgagcaaaacaccagcaaggccttctcattcacctcaggatcgacgggcttc
agtttttcatctgtaacacaaggtgctggattgtctcaagggaaggatgtgaacaagttc
tccattggcggaaatggcaaagggttgtttggccaaactggagaggagccattctccctt
cccactaagtcaaactctcctggtctgagcaatgggtcttcaagctcatcggccaacagt
ttaggggaagtagcaaaacagggttccactgttactggttctaagacagagccgcagcct
ctaaaggcagctggaggggagacattaggcagtttttcaggactacgagtgggacacgga
gaagaagcaaacgaatcctccacaaagaccactgctcctgcattttccttcgggaatgct
ggacttggccatagcaagtcagctcctcagtttaactttggttcaactccccttaagtct
gccgaagacggggctgcagcagacatgcctaaggtgtcaggatcaggcagcttgtttaaa
cctcctgattcaaactccatgccaaccttttctataaccccttcaactacagctgcttca
gcgctgcctacatctttaagtagtcttcttgcagctcctactgaacagcctaaagctact
cagcaaccttcagaaagcacatcggctgctttaccagaactgagtaccaaggaacttgct
gtagacctggctagtgttccggcagaacctgagcctctagtgactgcagttgccacaaca
accacgccaacatctgcagcaccaacacttcctatggtcactcctgtccctactgcagac
tcctcttctacagttcctgcagagacggaaacaactctgcctccagcaccaccaactgct
tcttccacagaagaagccaccccagacccctcttctacacctgccgtctccacatctacc
accgctgtcccacttaccatcgaggtaacctcagcagctttaccagcttcctcctcagaa
aaaccaggctccatttttacctctgctactcctgcaaccaccactagcaattctgttggg
gccataccagccattaacacagctgctcccacaaccactaccgctgcagttatcaccagt
gcagcaacgacagctgctaatgtgtttgggcagcctgccgctcctcctgcctcttctgcc
cctgcaactaccggattcggctcatctggatttggcgcaccaacagaaaccggtttcggc
aaatctgtatttggcgtgggtgggtttggacagcctgctagcataggaggaacttcgagt
ggcttttcattcacccagtcagcattcggagcaagttcaagcagtgcgaccactggagga
ggtggtcttttcggtgctcccactgttaccaatgcaagctccttctccttcggcaccagc
agttccagcacacccagcagcaccgggctgtttagccaaagcaccccgtcagtattcggc
cagagctctggatttgggcaaggatctatgttcagaaataacaccaccacatcatctgcg
tcaggcttcagctttggacagccctcaggttttggctgttcggcggccacacctgtgttt
ggccaacaatccaccactgggagcatatttggacagcaacagcaaccttcaactggtgga
ggtttgttcggtcaaagttcgaccggcgctgcaacctcgtcctctggcggattcttcagc
gggttgggaggcaaacccagtgaagacgctgccaacaagaacccatttggtaccaccgcc
tccactggcgtgtttggccagagcacgcagtctgggcccaacagcctctttgggagcagt
agcgccaagacctttggatttggtcagccctccttcggggagcagaagcccagtgggacc
ttcagtactggtggaggcagtgttgcatgtcagggctttggttccttctccacaccatct
aaatcaacgagcggctttggcagcgcccccgtgttcggaagccccccttcttttggcggt
tctcctgcattcggtggcggcgcttcattcagttcaagtccgtctttcagcaacccttta
gcttcccagtccagtaaagtgtttggcgagggaacagcagccgccagcatgggaggattt
ggtttctcctcaccccccagtgccccctcctttgggactctcgccactcagactgcgccg
tcattcgggagcttggcccagcagggccctggatttggaagccagcccagcagcttctca
ggctttggccagcagccacagacgggaggattttcaggaaacgcatttggatctccaaat
ccaccgggtgctccgtcgtttggcagctggagaagctga
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integrated database retrieval system
