Oryzias latipes (Japanese medaka): 101170864
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Entry
101170864 CDS
T02443
Symbol
frem2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101170864 (frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ola04091
]
101170864 (frem2)
Lectins [BR:
ola04091
]
C-Type lectins
Lecticans
101170864 (frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
101170864
NCBI-ProteinID:
XP_004076347
LinkDB
All DBs
Position
14:10453441..10520163
Genome browser
AA seq
3124 aa
AA seq
DB search
MLLRGLLFLCFSVTGIVLAQRDSSGLFYALRSELSEDAILVANNGLRVPFGRSVFIDPIN
DLVIQTQPGDRCSITVLDNDPLSQRPGHLSPKKFPCDFGPRDVTYFHYGSRSPAKDRVRL
QLRYDTQTETIIIPFMMEVDVLFTQLELLTKNMPLTVVRLQGISNPIDKKILEFTYDRDS
FKCEVGLFSSESSLPRYGKLLDGGKLSTMTDCDEITQAGIRYQHTFNHKSPNKDYIPMVV
ELHDKEDNLVKQECFHLMVRIKEGEENTPPKPSFASMMMLEVSQFVMTAVTPDMLAAEDA
ESDPEELIFNITSSLSYEEGYIVSTDDRNLPITSFYQRDLRDLKIAYVPPSLDSDTERIF
QLEFEVVDTEGAVSDPFAFMIVVKPMNTLAPIVTRNTGQLLYEGQSRPLISSHNLEISDE
DNLDAVTITVVDGLRHGDLLVLGSHSKFFTSADLTTGIVLYQHDGSDTYSDNIVFKMTDG
KNEVEFLFPITIVPTDDEPPIINANTGLVLFRNEMVPLSPHMLSAADIDSEDSTIKFTIV
PPFSTIGTVLLRQSDAPEDPSSWKFNTEDEVYEKEVSEWLQKDIIDGKLFYRHTGPHSSG
TVTDQFVFTVQDDNDPPNLSGENSFIIRVLPVDDVPPELFPGTTLQMTVEEYKVTHFSKE
VLRYTDLDSEDRDLKYTVIQPPMDTDENNPITFGSLVLTDNPDIKVTEFTQAQVNHHKLS
YAPPDVELGITAHVVQFRYTVEDTAGNSAEGAFTIYLQPVNNKPPQITNTGFGVFERGMH
IITQAELDAVDLDTKSEEITFTLSQPPKHGHIQFAFSDLDKKGAFRLADISNGKISYMHN
GEETVNDGFLLDVSDGIHVVTVTVKVHVKPVDDETPIVTLPAGTVGSRIDVLENGATEIT
TDVIQGHDDDTDDLQLTFIVEDPPSLGEILVKGLPATRFTQADVINGVVVYAHTSGEIGL
NILQDGFNLTLTDMSDDWTVGGNKVSGVHVRVTILPVDNQAPQVGIGIQFSVIEGEKYAI
SPEHVNAEDKDTPSDDILCTIIVQPTAGYLENISPAPGSEKSRSGTAISAFTIRDIRDGS
IYYVQSIHKGVEPVEDRFTLRCTDGINFSENHIFPIVIIPANDEKPEIYLREIVLMEGMN
IVIDTPILNGADVDVPSEELVFIISKPPKHGTILNQLSTGSVLVTNFTLEQIKEASSIIY
EHDDSEVSEDSFEVILTDGKYSVQKTAMVMIIPVDDETPRMSINDGLEVNIGETKEINNK
VLKATDLDSDDSTLSFIVRFGPSQGHLQRKTSSGSLENVTLGMNFTQAEIDAGLVLYTHN
GQEGIRDLIKFDVTDGINSLIDRYFYITVGSIDMVFPDVVSKGVSLKEGGRVTLTTDLLS
TSDINSPDENLVFTVTRAPVRGHLECTDTPGMPIVLFSQLQLAGSKIFYVHTSDDEVKMD
SFEFEVTDGYNPVFRTFRISIVDVDNKKPVLTIKSLVVTEGQLKLITPFELNAEDQDTNE
KMIRFTVTQLPIHGKLLFNKSTPVASFTKQDLNENLISYKHDGTESSEDSISFTITDGTH
TDFFVFPDTVYETRRPQTMKITIVAVDNGVPQIVVNKGALTLKILTTGHLGLPISPKVLR
AEDRDSRPASLLFHITTQPKHGYVVNLGHGNNSVDTFSQADIDDLHICYVLRNEENATSD
VFYFSVEDKGGNKLKDQQFRLDWAWISLEKEYYVVDEEDKHLDVVLRRRGYLGETSFIGI
GTQDGSAKKNEDFKGKLQKQVQFNPGQTKATWRVRILADGKYEQAETFQILLSEPVMGVM
EFPVVATVEILDPKDESSVFFPEQVHLVEEDVGELFIPVHRSGDVSEELMVICHTQQGSA
KGTIPTTVLSYSDYISRPEEHSSLLRFDRGEREKLCRVVIIDDSLYEGEESFNLTLSMPV
GGRLGKHYTTTKVNIVEDLDDAPVFYFGEAEYYADESDGYVEVKVWRTGTDLSKAGTVTV
HSRKTEPASAEAGSDYVGLSHNLDFAPGVSMQTFRVFILDDLGQPELEGTERFELVLRLP
LNGILGEPGKATVFINDSVSDLPKVQFRKPLYTGEESDGLITAMVYRSGDIRHKSSVRCY
TRQGSAQVASDFDERPNTDASVISFLPGEVEKPCVLTLVDDTLYEEGEELRLVLGSPRSS
SQFGASVGAPNETLVKIKDTADKPIIRFLETKFSVSEPKEAGAVAIVRVPVVRMGDTSKV
SVVRVHTKDGSAVSGEDYYPVSQDIEFRQGDKQHVVQVEVLFDGVREMREAFTLHLKPDD
NMVAETEMTKVIVYIEESNSMADVTFPSLPHVVSLLHYDDVARTPHNLQPPAGYPVICVT
ACNTKYPDYDKTGSICVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKII
TLDSVYFQAGSRVQCAARAVNSDGDEGLELSSPIAVISMEEGMCQPRKMGTVGAEPFSAK
LRYTGADDPKHPNLIKVTVTMPHIDGMLPVISTRPLVNFDLTLSPDGTRVGNHRCSNLLD
FSEVTTGHGFITASTRNPESMGDSAPYQFSSALRGNSTLRFYRNLNLEACLWEFSSYFHM
SELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQSELRLTFV
YDTAILWKDGIGSPPQAELQGSLFPTSMRINKQGRLVVNFRTKAHFRGLFVQSHSPGRIK
RSVSSLSMVMSVDNPGLTINLTLVRSEPTYNQPVQQWIFISDFAVRDYSGTYTVKLIPCT
TAQTIEYSVPPICSPREPISFDLNIRFQQVSDPVAVEFSLNTQMFLLSKRSLWLSDGSTN
FGQESDVAFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTNFEFGC
LADSPSLLYRFKILDKAQPETQALVFGEIGFNAVLAVDDPSALSLVRQPGSDGFRLDSSA
MFQVAAGREWYIHTIYTVRSKDAVSRGIGKRSLEYHSFVSTTDSRALSARPEAPRKRRSA
GDAIPAVAEDIGIDNSRGTNIMHIFLDRTKRKSRVSDELFAGGLEPDELNADDTEEGLLT
VVGGLVGVLLTVLIIVIITLILRSKQKDWKEGGRGGVQKVVKGSVSTEPMLVVRMQDCHN
SSEV
NT seq
9375 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttcgcggacttcttttcttgtgcttttccgtaacaggtattgttctcgcgcag
cgcgacagctccggattattttacgcactcagatcagagctatcagaagatgcgatcttg
gtggccaacaacggattgcgagtgcctttcgggaggtctgttttcatcgaccctataaat
gatttggtgatccagacgcagccgggggaccggtgcagcatcaccgtcctggataatgat
ccgctctcgcagagaccgggacacctctctccaaaaaagtttccctgtgatttcggtccc
agagatgtgacatactttcactacggctccagaagtccagctaaagacagagtgaggctg
cagctcaggtatgacacacaaactgaaaccataatcatcccgtttatgatggaggttgac
gtcctttttacgcagctggagttactcaccaaaaacatgcctctcaccgttgtgaggctt
caagggatcagcaatcccattgataagaagattttagagtttacctatgacagagactcc
tttaaatgtgaggtgggactcttttccagcgagagctcactgcctagatatggaaaactc
ctggatggggggaaactttccaccatgacagactgtgatgagatcactcaagctggcatc
cgctatcagcacacctttaaccacaaatctccaaataaggattacattcccatggttgta
gagctgcatgataaggaggacaacttagtaaagcaggagtgttttcatctcatggtccgt
attaaggaaggagaggaaaacactcctcctaaacccagctttgcttccatgatgatgttg
gaggtgagccagtttgtgatgacggctgtcacacctgacatgctcgccgctgaggatgca
gagtcagacccggaagagcttattttcaacataacctcctccttatcttatgaggagggc
tacatagtcagtactgatgacaggaacctcccaatcacatccttctaccagagagacctg
cgtgacctgaaaatagcgtatgtgccaccttctctggactcagacacagagaggattttc
cagcttgagtttgaggtggttgacactgaaggagccgtctcagatccctttgcttttatg
attgttgtgaagccgatgaacacactggcccccattgtgactcgcaacacaggccagctg
ctgtatgaggggcagtcccggcccctcattagctcccacaacttggagatcagcgatgag
gacaacctagatgctgtcaccatcacagttgtggacgggctgcggcatggggacctctta
gttctcggttcacacagcaagttcttcacatctgccgaccttacaacagggattgtcttg
taccagcatgacggaagcgacacatatagcgacaatattgtctttaaaatgacagatggg
aaaaatgaggtggaattcctgttccccatcacgattgttcccactgatgacgagccaccg
attatcaatgccaacactggtctggtgctcttcagaaatgaaatggtgcctttatctcct
cacatgctcagtgctgctgacatagactctgaggactcaaccattaaattcaccattgtt
ccgcctttttccacaattggcacagtgctgctacgacagtcggatgccccagaagaccca
tcttcgtggaaattcaatacagaagatgaggtgtatgagaaggaggtgtcagagtggctt
cagaaagacatcatagatggaaagctgttttacagacacacagggcctcacagctccggc
acggtcacagatcagtttgtgttcactgttcaggatgacaacgacccccctaacctatca
ggcgaaaactcattcattatccgagtcttaccggttgatgatgtaccccctgagttattc
cctggtaccaccctgcagatgactgtcgaggagtacaaggtcacccactttagcaaagaa
gtgttgcgctacaccgatttggactctgaggaccgtgacctcaaatacacggttatccag
cccccaatggatacggatgaaaataaccccattacgtttggttctttggttttgacggac
aaccctgacattaaagtgacagaattcacacaagctcaagtcaaccaccataagctatcc
tatgcccccccagatgttgagttgggaatcacagcccatgttgtgcaattccgttacaca
gttgaagacacagctggaaacagcgctgaaggcgcctttaccatctacctgcagcctgtc
aacaacaagcccccccagattacaaacactggctttggtgtgtttgaacgagggatgcat
ataatcacccaagcagaactggatgctgtagaccttgatacaaaaagtgaggaaataacc
tttactctgagccagccccctaagcacggccatattcagtttgcattttcagacttggat
aaaaaaggagctttcagacttgcagatatctcaaatggaaagatatcgtacatgcataat
ggagaggagacagtgaatgatggatttctgttggatgtcagtgacgggattcatgtggta
actgtgacagtcaaagttcacgtaaagccagttgatgatgaaactccaatagtcacccta
cccgcgggaaccgtcggctctcgaatagatgtgctggaaaatggtgccacagaaatcaca
actgatgtgattcaaggacatgacgatgacacagatgacctccagctgacgttcattgtg
gaagatcctccatccttgggtgaaatattggtcaaaggattgcctgccactagatttacc
caagctgacgttattaatggggtggttgtatatgcacacactagtggggagataggtctc
aacatcctgcaagatggattcaatttgaccctaacagacatgtctgatgattggactgta
ggtggcaataaagtcagcggagtccatgttcgagtcactattcttcctgtagataatcag
gccccccaggtcgggattggaatacaattcagtgtcattgaaggagagaaatatgccatc
agcccagaacatgtgaatgctgaagataaggacaccccatcagatgatatcctttgcacc
atcattgttcagcccactgcaggttacctggaaaatatatctcctgccccaggctcagaa
aagtcaaggtcaggaacagccatcagtgcttttaccatcagagacatcagggatgggagt
atttactatgtgcaaagcattcacaaaggagtagagcctgtggaggataggttcacgcta
aggtgcacagatggcataaacttttctgaaaatcacatcttcccaattgttattatccct
gcaaatgatgaaaaaccagagatttacttgagggaaatcgtcttaatggaggggatgaac
attgtcatagacacaccaattttaaatggagctgatgttgacgttccatctgaagaactt
gtatttataatttccaaacctcccaaacatggcacaattttaaaccagctatccacaggc
tcagttctagtgactaatttcactttagaacagatcaaagaagcctcaagtattatttat
gaacacgatgactcagaggtaagtgaagatagttttgaagtcattctgacagatggaaag
tactctgtgcagaaaacagccatggttatgatcattccagtggatgatgagacccctagg
atgtctatcaatgatggccttgaagtaaacattggagaaacaaaagagattaacaacaaa
gtgctgaaagcaactgatttagattcagatgacagcacactgtcatttatcgttcgtttt
gggccaagtcaaggtcaccttcaaagaaaaacctcatctgggtctctggagaatgtcaca
ctcggcatgaatttcacacaagctgaaatcgatgctggtcttgtgctttacacacacaac
ggacaagaggggattcgagacctcatcaaatttgatgtgaccgatggcatcaattcactc
attgatcgttacttttacatcactgttggaagcattgacatggtttttcctgatgtggtt
agtaaaggtgtctctctgaaagaaggtggtagagtgactttgaccacagaccttctcagc
acctctgacatcaacagtccggatgagaacttggtcttcactgtcactcgggcccctgtt
agaggccatctggagtgcacggatactcctgggatgcccattgtgttgttttcccagctc
caattggctggaagtaagattttttacgtccacacttcagacgatgaggtcaaaatggat
agttttgagtttgaagtcaccgatggctacaacccggttttcagaacctttagaatctct
atagttgatgttgataacaagaaacccgtcttgaccataaaaagtctagttgtgacggaa
ggacaacttaagttgatcacaccattcgagctgaatgctgaagaccaggacacaaacgag
aagatgatcagatttaccgtcacccaactgccaattcatggcaaacttctgttcaacaaa
tcaacacctgtcgccagcttcaccaaacaagaccttaatgagaatctcatcagctacaaa
cacgatggaactgaatcatcagaggactctatttccttcaccatcaccgatggcacacac
acagacttctttgttttccctgacacagtttatgagaccagacgccctcaaacgatgaag
atcactattgtagctgtcgataatggggtcccccagattgtggtgaacaaaggtgcgctc
acgctaaagattttgaccacaggtcacctgggattacccatcagtcccaaagtactgagg
gcagaagacagagatagcagaccggcgtcactgcttttccacatcactactcaacccaaa
catggatatgttgttaatctggggcatggaaacaactctgtggacacatttagtcaagcc
gacattgatgacctgcacatctgctatgtattgcggaatgaagaaaacgcaacatctgat
gtcttctatttctctgtcgaggataaaggcggaaacaagcttaaggatcagcagttccgt
ctggactgggcctggatctctctggagaaagagtactatgtggtggatgaggaggacaaa
cacctggatgtggtgctcagacgcagaggctacctcggagagacgtctttcattggcatt
ggcacccaggatggcagtgcaaagaagaacgaggacttcaaagggaagttgcagaagcag
gtgcagttcaacccgggacagaccaaagccacgtggcgtgtgcggattctggctgatgga
aaatacgagcaggcagaaacctttcagattttgctatcggagccagtgatgggagtgatg
gagttccctgtcgtggcaacagtggaaatcctggatcctaaagatgagtcgagcgtattc
ttccctgaacaagtccacttggtggaggaagacgttggcgagttattcatcccagtgcac
cgcagtggagacgtcagcgaggagcttatggtgatatgccacacacagcaaggttctgct
aaaggaaccatccccaccactgttctttcctattctgactacatctcgcgtccagaggag
cacagcagcctccttcgttttgacaggggggagagggaaaagctgtgccgcgtcgtgatc
atcgacgactctctatatgaaggagaagagagttttaacctgactctgtctatgcctgtc
ggaggtcgtctgggaaaacactacacaacaactaaagtcaacattgtcgaagatttggat
gatgctcctgtgttttactttggagaggcagagtattatgcagacgagagtgatggatac
gtggaagtcaaagtgtggaggacaggaactgatctgtccaaggctggtactgtgacggtc
cactctcgcaaaacagagcctgcctctgcagaagctggttctgactatgtgggcttgagt
cacaacttagactttgccccgggtgtcagcatgcagacgttcagggtgttcattctggac
gaccttggacagccagagctggaggggactgaaagatttgagttagtcctgcgactgcca
ctcaatggtatcctgggagaacctggaaaggcaacagtcttcatcaatgactcagtgtca
gacttaccaaaggtccagttccgcaaacctctttacacaggagaggagagcgacggcctc
atcacagcaatggtgtatcgcagcggagacatccggcacaagtcctctgtgcgctgttac
acccgtcagggctctgctcaggtcgcctctgactttgatgagcggcccaacacggacgca
tctgtcatcagtttcctaccaggcgaggtggagaaaccatgtgttctgacattggtggac
gacacgctctatgaggaaggagaggagctgcggctggttttggggagcccgaggagcagc
tcacagtttggagcatcagtgggggctccgaatgaaactctagtgaaaataaaagacacg
gcagacaaacccatcattcgttttctagaaaccaagttcagcgtaagtgaaccaaaggaa
gctggagctgttgcaattgttagggtccctgtggtacgaatgggtgacacttcaaaagtg
tccgtggttcgtgttcacaccaaagacggatctgctgtctcgggagaggattactacccc
gtgtctcaagacattgaattcagacaaggggataagcagcatgtcgtgcaggtggaggtg
ctgtttgatggagtgagggaaatgagggaagccttcaccctccatcttaagcctgatgac
aacatggtggctgaaacagagatgactaaagtaatagtgtacattgaggagtccaacagc
atggctgatgtcaccttcccatcgttgcctcatgttgtgtcgttgcttcattacgatgat
gttgctcggacaccacacaacctgcagccaccagccggatatccagtcatctgtgtcaca
gcgtgcaacacaaaatatccagactacgacaagacaggttctatctgtgtcagcgagcac
atcaataacaccttgacccgctaccgctggctcatcagtgccccagctggtcccgatggc
gtcaccagtcccatgagggaggtggactttgacacgttctttacttcctccaagataatc
acactggactcagtttacttccaggcgggctccagggtccagtgtgctgccagagctgtt
aattctgatggggatgagggcttagagctcagcagccctattgccgtcataagcatggag
gaaggcatgtgtcaaccacggaagatgggaactgttggtgctgaacctttctctgccaaa
ttgcgctacactggagcagacgacccgaagcaccccaacctcatcaaagtgactgtcact
atgcctcacatcgatggtatgcttcctgtaatctccactcggcctctggtgaattttgac
ctgactctcagtcctgatggaacccgcgttggaaaccaccgctgctccaacttgcttgat
ttcagcgaggtcaccacaggtcacggcttcatcactgcttcaactcgcaaccctgagagc
atgggagattcggcgccctatcagttcagcagtgctctgaggggcaacagcactctgcgt
ttttacaggaacctcaacctggaagcctgtctgtgggagttttccagctacttccacatg
tctgagctgctcactgactgtggcgggaccatcgggacagatggacaggttctgaacctg
gttcagtcgtacgtgaccctgcgtgtgcccctttatgtgtcatacgtgttccactcacca
gtgggtaccggcggatggcagcactttgatctgcaatctgagctgcgtctcacctttgtt
tatgatactgccattctctggaaagacggtattggcagtcccccacaagcagaactacag
ggttctttgtttcccacaagcatgcgcatcaacaagcagggacgtttggtggtaaacttc
cgcaccaaggctcattttaggggtctgtttgttcagtctcactccccaggtcgaatcaaa
agatctgtgtcctcgctgtccatggtgatgagtgtggacaaccctggcttaaccattaac
ctcacattggtcaggagtgagccgacctacaaccaacctgtgcagcaatggatcttcatc
tctgactttgctgtgagagactattctgggacatacacagtaaagctgatcccgtgtact
acagctcagactatagagtattctgtcccccccatctgcagtcccagagaacccatctcc
tttgacctcaacattaggttccagcaggtgagtgacccagttgcagtggaattcagtttg
aacactcagatgttccttttgtccaagaggagcctgtggctttctgatggatccacaaac
tttggtcaagagagtgatgtagccttttctgagggcgatacgatatatggtcgtgtcatg
gtggatcctgtgcagaatctgggagattcattcttctgcagcatagaaaaggtgttcctg
tgcaccggtgctgatggatatgtgcccaagtataacccaaccaattttgaatttggatgc
ctggctgactccccatcactgctttataggtttaagatccttgataaggctcagccagaa
actcaggctcttgtatttggtgaaatcggttttaatgctgtgctggcggtggacgatcca
tccgctctgtctcttgtcagacaacctggttcagatggctttagattagattcatctgcc
atgttccaggttgctgcaggtcgtgaatggtacatacataccatttatacagttcgctca
aaagatgctgtcagcaggggcatcgggaagcggagcctggagtaccactccttcgtttcc
acaaccgacagccgagctttgtcagccaggccagaagctcctcgcaaaagaaggtcagct
ggagatgcaatccctgcagtcgctgaagatattggcatagacaatagccggggcaccaac
atcatgcacatctttttggaccgcaccaagaggaaatccagggtgtcagacgaactcttt
gctggtgggttagaacctgacgagctgaatgcggatgacacagaggagggtctgctgact
gtggtggggggtctggtcggggtgctgctaactgtcctcatcattgtcatcatcacactc
atactgagatccaaacagaaagattggaaggaagggggaaggggaggggtgcaaaaggtg
gtaaagggatctgtcagcacggagcctatgcttgtggtgaggatgcaggactgtcacaac
agctcagaggtctga
DBGET
integrated database retrieval system
