Oryzias latipes (Japanese medaka): 101170915
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Entry
101170915 CDS
T02443
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170915 (ccdc50)
Membrane trafficking [BR:
ola04131
]
Autophagy
Other autophagy associated proteins
Others
101170915 (ccdc50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
101170915
NCBI-ProteinID:
XP_011472170
UniProt:
A0A3B3IAU1
A0A3B3HEF5
LinkDB
All DBs
Position
4:complement(8747270..8766221)
Genome browser
AA seq
622 aa
AA seq
DB search
MADCNVSIDQNKLPGVKEVCRDFAVLEDHSLAYNLQEQEIESHLASNVHKNRLVQKDLIV
AKKLQEEEDEKAKIKSQKQHGDIERQDNEIAQEIQEELIRQAELQRLQEEKDAAIARKLQ
EKEMKEERRRKKQQESNLDEDYFEDHGAARSLDVDKCIRQKSGSPELRGAHSSVYSGRDF
SPEYYSADAKRSRYPRQDSAAPHTQVKNTEHYSMAEGGRSRHADTHPEPLPASRPRHGDK
YPVYENAHAPRGKNYGGADSDEVVRKKKKPDRPPPPQILIERDKTLDRERTRHDRDGQRE
LEWQRDLGKDSRRGREQHLKLQRDPEKSREGGHSGDRQGERDRRRQKQQVRGRSRDRELE
EDLLEPEESKDWLMESSASWEDEDVGRERRDKNQPRVYSISNKPVNPFRNGEDQANSQES
WEPGHGGVHGRERSYSAPNTETGRILHRGSAAVIGQSAEFGLSEATQELTKLDLRELELR
DMEVAKKLQEEELKANSMHVRAAQVAQDEEIARILMEQEKKEYRKIREREKEKAQERERL
ERRRQEGEYRPKSEDVVRPRTREEHDHQRQKSHSKPTRPPQPRINDYENVGPGGYGYSEH
HPVNARPHTRPEAAYKGAYQKR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctgattgtaacgttagcatcgaccagaataaactacctggagtgaaagaggtgtgc
cgcgattttgctgtgctggaggaccactcactggcctacaaccttcaagaacaagaaatt
gagagccacttggcttccaatgtccacaagaaccggctggtgcagaaggacctgatcgtg
gccaagaaactacaggaggaggaggatgagaaagccaagatcaagagccagaagcaacat
ggagacattgagcggcaggataatgagatcgcacaggaaatccaggaggagctgatccga
caagcagagcttcagcggctgcaggaggagaaggatgcggctattgctcgtaagctgcag
gagaaggagatgaaggaggagaggaggagaaagaagcagcaggaatccaacttggacgag
gactactttgaggatcatggagctgcaagaagccttgatgtggacaaatgtatacgccaa
aaatcagggtcgcctgagctgcgtggtgcgcattctagtgtgtactcggggcgggatttc
tctcccgaatattattccgcagacgcaaaaaggagcaggtacccaagacaagactcagct
gcaccccatacccaggtcaaaaacactgagcactactcgatggcagagggagggcgtagc
cggcatgcagacacacatccagagcccctgcctgcctccagacccagacatggtgacaag
tatcccgtctatgagaacgcacacgctcctagaggaaagaactacgggggggcggactca
gatgaagtagttaggaaaaagaaaaagccagatagaccacctccacctcaaattctcata
gaaagggacaagactttagacagagagagaaccagacatgacagagatggtcaaagagag
ctggagtggcaaagggatttaggcaaagactccagaagagggagggagcagcacctgaag
ctgcagagagacccggaaaaatccagagagggggggcacagtggagacaggcaaggagag
agagaccgccgcagacaaaaacagcaagtacgaggcaggagcagagacagggagcttgaa
gaggaccttttggagcctgaagaaagcaaagactggttgatggagagcagtgcatcctgg
gaagatgaggatgtcgggagggaaaggcgggacaagaaccagccgcgagtctactccatc
tccaacaagcctgtcaacccgttcaggaacggtgaagaccaagcaaactcacaggagtcc
tgggaacctggacatgggggggttcatggaagggaacgcagttatagcgccccgaacaca
gagacaggtcgtattctgcacagaggaagcgctgctgtcattgggcaaagtgcagagttt
ggactgagtgaggcgacccaagagctgaccaagctggatcttcgtgaactcgagctgcgg
gacatggaggtggcaaaaaagctgcaggaagaagagctgaaggcgaacagtatgcatgtg
cgtgcagcccaagtggcacaagatgaggaaattgctcgaatcctgatggaacaagagaag
aaggagtacagaaagattcgagaacgggaaaaagaaaaggcgcaggagagggagagattg
gaaaggagacgacaggaaggagaatacagaccaaagtcagaggatgtagtgcgacccaga
acgcgagaagagcacgaccaccagaggcagaaaagtcacagcaaacctaccaggcctcct
cagcctcgtatcaacgactatgagaatgttggacctggtgggtatggctactcagagcat
catccggtcaacgctcgccctcacacgcgacccgaggctgcgtacaaaggggcctatcaa
aagcggtga
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