Oryzias latipes (Japanese medaka): 101171026
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Entry
101171026 CDS
T02443
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101171026
Membrane trafficking [BR:
ola04131
]
Endocytosis
Others
Others
101171026
Endosome - Lysosome transport
101171026
Endosome - Golgi transport
101171026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GbpC
Motif
Other DBs
NCBI-GeneID:
101171026
NCBI-ProteinID:
XP_004077390
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Position
15:complement(19731113..19782490)
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AA seq
1241 aa
AA seq
DB search
MVFGSLWSFLLLSCMFLFHPKIGAQGEISSTKSLDRFYRLEVTPGDAPVTKNPAGIKVKQ
KVDERSEVFSSLEAEPAAVSKSNENQVENKTLSGNITQYRSSPNYESAPTIPLEKYSNIS
MDPPAANKTTQHTFSDKERKIKRSVGASYTENMDRSVCGGAQRREGFLETVQGASNSRAE
CGRTRQEARGLNPRQSEPYLDTSTFVLSGDAAHNQAMVHWSGHNSSVILILTKLYNFNFG
AVTESSLWRSTDYGSTYTKLNDKVVSRTVLSYLYVCPTNKRKIMMLSDPEVESAVLISSD
EGASFEKYPINFHILSLLFHPTNENWILAYSHENKLYSSMDFGRKWQLVHDNVMPGRFYW
AVMGLDRESDVVHIEALIEKGRAQYVKCRAQRCSEGSRQYLFPGYVDTNSLVVQDEYVFT
QVTKSGRPRYFASFMRESFKEMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYI
SDSPGVYFILSLENLRTNRGPAGNLLVDFYKIEGINGMYLANKLVDNHIKTFITYNKGQT
WALLPAPATDIAGNNLRCFLPFCSLHLHLEMSENPYTSGPITSKKSVPGIIIATGNIGTE
LSSTNLGMFITSDAGNSWRQIFDEEYNVWFLDNGGALLAVLHAATPIRHVWISLDEGKKW
DRHSFSLAPLYVDGVLMEPESGNHIITFFGHFGQHSEWQLIKIDYKGLFNRKCMDGDYQT
WYLHNKDELCVMGEKQIYMKRRPGNRCMLTQDYSRIYSSEPCLCTAFDFECDYGWERQAD
GKCSPAFWFNPKGAAKSCSTSQTFLNSTGYRKVLSNNCKEVERNVYSPKREACHPRAPRG
LRLTTSHGELSATAGSNVTYMISLDEGESLSTSIQLDFGDGIKITYSNLSRTSDGIKHIY
RTTGIYRVTASAENSQGSDSSVLFLHITSPVERIYLSAPIVTIRGKAANLTAVAWPSHSR
TLTFFWWFDNSSEPIITLEGSISHTFHRVGKNKVTLQVACGSTVMQDSKVITVREFFRSL
LLSFSPTLDEHNPDISEWREDIGRVVRTALSQQVSGVPEDQLLVSLYPGLPTTAELFILP
YEHTYSEHKRSSEEDLQTISDIFVSALNQGLVQFELKPDVHIIIYMTQQTLAPLVHSNSI
HSGSAMLMLLTVVFVGLAAFFIYKFKRKIPWIHVQTEDTHEKEPEVISTVGQSDAKSKVK
LSEFPSQKELMEKELESRSRGGFGRNMERIVTREFPNCTNV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgggtccttgtggagctttttgcttttgtcttgcatgtttctctttcacccg
aagatcggagctcaaggggagataagttctactaagtcgctcgaccgattttatcgtttg
gaggtaacgccgggggacgcacctgtgaccaaaaacccagctgggatcaaagtgaaacaa
aaagtcgatgaaaggtctgaagttttcagcagtttggaagcggaaccagccgctgtctct
aaaagcaatgaaaatcaggtggagaataaaacactgagtggaaatatcactcaatatcgc
agctcgccaaattatgaaagcgccccaacaatacctctggaaaagtattccaacatttct
atggatccaccggcggctaataaaacgacccaacacacattttccgataaagaaaggaag
attaaaaggagtgttggtgcgtcatacaccgaaaacatggacaggagtgtatgtggagga
gcgcagagaagagaggggttcttggaaacggtccaaggtgcgtccaactccagagccgag
tgcggtcgcactaggcaggaagccagagggttaaacccgaggcaaagtgagccctacttg
gacacttctacttttgttttgtcgggggacgcggcacacaaccaagcgatggtgcactgg
tccggacacaacagcagcgtaattctgatcttgactaagctatacaacttcaactttggg
gctgttactgagagctcactctggaggtctactgattatggcagcacctacaccaaactc
aatgacaaagtggtttcaagaacagtattaagctacctgtacgtgtgccctaccaacaaa
aggaagataatgatgcttagcgacccagaggtagagagcgctgttctcatcagttcagat
gaaggggctagctttgagaagtatcccattaacttccacatcctgagcctcctcttccac
cccacaaatgagaactggatactggcttacagtcatgaaaacaagctctacagttccatg
gattttgggaggaaatggcagctcgttcacgacaacgtgatgcccggcagattctactgg
gcggtaatggggctggacagagaatcagatgtggtccacattgaggcgctcatcgaaaaa
ggccgcgctcagtacgtcaaatgcagagcccagagatgctcagagggcagtagacagtat
ctcttccctggatatgtagacaccaactcactagtcgtacaggacgaatacgtttttaca
caggtgaccaagtctggacggcccagatactttgcttccttcatgagggaatccttcaag
gagatgaaattaccaaaatattgccttccaaaggacatgcatatcatcagcacagatgag
aagcaggtatttgcagctgtccaggagtggaatcagaacaacacctacagcctgtatatc
tcagactcccctggggtctactttatcctttcattagagaatctgagaaccaacagagga
cctgccggtaacctactggtcgacttttataagattgaggggataaatggcatgtatctt
gccaacaaattggtggataatcacatcaaaacctttatcacatacaacaagggacaaacc
tgggcgctgctgccagctcctgccaccgacatagctggaaataaccttcgctgctttctg
ccgttctgttcgctgcatcttcatctggagatgtcagagaatccctacacatctggaccc
attaccagcaaaaagtcggtaccaggaattattattgccacagggaatattggaacagaa
ctctcctccaccaaccttgggatgtttataacatctgatgcaggaaatagctggagacag
atttttgatgaagagtacaatgtttggtttcttgacaatggaggggctttgctggcagtg
ctacatgctgcgacgccgattcgccacgtttggatcagtctagatgaaggtaaaaaatgg
gatcgccacagtttctctttggcacctctgtatgtggacggagttttaatggagccggag
tctggcaatcatattataacattctttggacactttggccagcactcagagtggcagctc
atcaagatagactataaaggcctctttaataggaaatgcatggatggagattatcagact
tggtacctgcacaacaaggacgagctgtgcgtgatgggcgagaagcagatttacatgaag
cgccggccggggaaccgctgcatgctgacccaagactattccaggatctattcctccgag
ccgtgtctctgcacagcctttgattttgaatgtgattacggctgggaacgtcaggccgat
gggaagtgctctcctgctttttggtttaatccgaaaggtgcggctaaaagctgcagcacc
agccaaaccttccttaacagcactgggtatcgaaaggttttatccaacaactgtaaggag
gtcgaaaggaacgtgtactcccccaaaagggaggcttgtcatcccagagcccctcgaggc
cttcgcctgaccaccagtcacggagagctgagcgccaccgccggaagcaatgttacttat
atgatcagcttggacgaaggagagtcgctgagcaccagcatccagctcgacttcggagac
ggcatcaagatcacatactctaacctgagcaggaccagtgatggcatcaagcacatctac
agaacgactgggatttaccgagtgacagcttcggcagaaaacagccagggatctgacagc
agcgtgctgtttttgcacatcaccagtccagtggagcgtatatatctctccgctcctatt
gtgaccatcagggggaaggcagctaatctcactgcagtggcttggccaagccactccaga
actctgaccttcttctggtggttcgacaacagctccgagcccattataaccttggaggga
agcatctcgcacacgtttcacagagtgggaaaaaacaaggtcactctccaggttgcttgt
ggaagcacagtaatgcaagactcgaaagtcataactgttagagagttcttcaggtccctg
ctgttgtcgttttctccaactcttgacgagcacaaccctgacatatctgagtggagggag
gacataggccgtgtggtgcggacagctctgtcacagcaagtgtctggagtgcccgaagat
cagctgctggtgtcattgtacccagggcttccaacaactgcagagctctttattctgcca
tatgagcacacgtacagtgagcacaagagaagcagcgaggaagacctgcagacaatatca
gatatttttgtttctgctttgaaccaaggcctggtccagtttgagctgaaacctgatgtt
cacattattatttacatgactcagcaaaccctggcacctcttgtgcattcaaactccatc
cacagtgggtcggccatgttgatgttgctcactgtggtgtttgtcggtttagctgcattt
tttatctacaagtttaaaaggaaaatcccttggatccatgtacagactgaggacacccat
gagaaggagccagaggtcataagcacagtgggccagagtgacgccaagtccaaggtcaag
ctcagtgagttcccctctcagaaggagctaatggagaaagagctggagagcaggagcaga
gggggatttggaagaaatatggagagaattgtcaccagagaattcccaaactgtactaac
gtgtaa
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