Oryzias latipes (Japanese medaka): 101171049
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Entry
101171049 CDS
T02443
Name
(RefSeq) uncharacterized protein LOC101171049
KO
K16338
syndecan 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04512
ECM-receptor interaction
ola04514
Cell adhesion molecule (CAM) interaction
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101171049
04514 Cell adhesion molecule (CAM) interaction
101171049
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101171049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ola00535
]
101171049
Proteoglycans [BR:
ola00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
101171049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
101171049
NCBI-ProteinID:
XP_023808590
LinkDB
All DBs
Position
24:complement(6528386..6530740)
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AA seq
154 aa
AA seq
DB search
MRFILPASLVLVAGLIPAVTSSISGLPEDLEGSGIDLESSGSGDWSDHVSPVEGKNIDEE
PEGDHLGEVHKTMDSGRMKLPADTLMASSTRISASGFVFLENGRHFWEKEEVLAGMIAGV
LTGAAIGATITAILIYKWKKREDEGGLLGKREIT
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcattttaccagcttcgttagttctagttgctggtttaattcctgctgtcacg
agctcgatttctggccttccagaggacttggaaggatcaggaattgatttggagagttct
gggtcaggagattggtcagatcatgtttctcccgttgaaggtaaaaacatagatgaggag
ccagaaggagatcatttaggagaggtacacaaaacgatggattctgggaggatgaagcta
ccagctgacactctgatggcttcttctactagaatttccgcgtccggatttgtgtttttg
gaaaatggcaggcatttttgggaaaaggaagaagttctggctggcatgattgcaggggtt
ctaacgggagcggcaatcggagctacgataacagcaatattgatctacaagtggaagaaa
agggaggatgaaggggggcttctgggcaaaagagaaatcacataa
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integrated database retrieval system
