Oryzias latipes (Japanese medaka): 101171140
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Entry
101171140 CDS
T02443
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03020
RNA polymerase
ola04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101171140 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101171140 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101171140 (polr1c)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101171140 (polr1c)
RNA polymerase I system
RNA polymerase I
101171140 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
101171140
NCBI-ProteinID:
XP_023818965
LinkDB
All DBs
Position
15:complement(424146..460610)
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AA seq
351 aa
AA seq
DB search
MAATGSNVEEIRNLVVLEEFGVKNVHTTDFPGNYPGFQDGWDMKTFQKNFRIDVVHLDEN
NIEFDMVGIDAAIANAFRRILLAEVPTMAIEKVFIYNNTSIVQDEVLAHRLGLVPIKADP
RLFEYKNIAEEFGEQEASEIDTIQLQLKIKCSRNPRASKESSDPRELYLNHIVYSKDINW
VPLGNQADVFADSRIGAVHDDIVIAQLRPGQELDVVMHCVKGIGKDHAKFSPVATASYRL
LPDITLMEQVEGEKAERLKRCFSRGVIDLEDVRGKKVAKVVNSRLDTCSREVLRHKDLKN
LVKLGRVRDHFIFTIESTGSLPADVLMQEAIKVLMAKCQMLLNELSSAGTQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccggcagtaacgtggaggagatcaggaatctggtggttctagaggagttc
ggagtgaagaatgtccacacaacagacttccctggaaactaccctggattccaggatggc
tgggacatgaagacctttcagaagaactttaggattgacgttgtgcatctggatgagaac
aacatagagtttgatatggtggggattgatgctgccattgccaatgcctttcgaagaatc
ttacttgcagaggttccgaccatggccattgagaaggtgtttatctacaacaatacatcg
attgtccaggatgaagtcttggcccacagattgggccttgtgcccatcaaagctgatcct
cgtctgtttgagtacaaaaacattgccgaggaattcggagagcaagaagcttcagaaata
gatacaattcaacttcagctgaagatcaaatgcagcaggaaccccagagccagcaaagag
tcctcagacccacgagagttgtacctgaaccacattgtgtattccaaggatataaattgg
gtccctttggggaaccaggcagatgtatttgcagacagtcggattggggcagtgcatgat
gacattgtaatagctcaactacgacctgggcaggagctggacgtggtcatgcattgtgtc
aaaggcattggaaaggatcatgccaagttttccccggtggcaacagctagttatcgtctt
ctcccagatatcacactgatggaacaggtggagggagagaaggcagagcgcctgaagcgc
tgcttttcacgtggagttatagatctagaagatgttcgagggaagaaggttgccaaagtg
gtgaacagtcgactagatacgtgtagcagggaagtacttcgacacaaggatctgaagaac
ttggtgaagctgggcagagtgcgagaccatttcatcttcaccatagaatctaccggcagt
ctacctgcagatgtcctaatgcaggaggccatcaaagtcctaatggccaaatgtcagatg
ttgctcaatgagttgagcagtgctggcacgcagtga
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