Oryzias latipes (Japanese medaka): 101171290
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Entry
101171290 CDS
T02443
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101171290 (ttll4)
04812 Cytoskeleton proteins [BR:
ola04812
]
101171290 (ttll4)
Enzymes [BR:
ola01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
101171290 (ttll4)
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
101171290 (ttll4)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
101171290 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
101171290
NCBI-ProteinID:
XP_004082083
UniProt:
H2MVH5
LinkDB
All DBs
Position
21:28259214..28276977
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AA seq
949 aa
AA seq
DB search
MLGCAAMPANQSLPWGGVKLRARSSSEGPPATDAAVPFRIEDKRPKNEQFPHESDQNLSL
PQRLEGFQNQNQVPSEMLENGSSSSITMAATLMQNDKPECNSVHRTLRNHPRAESVTGRT
AEEHGDRNTAADCLSSPPVPRPCLSPHTQQGSVSSKRAFSRDGAGPETRSTRRLSGAPRR
SRRVKTAVRQRSAQSSCRSRSANGLLSARGVCLVVMEAAASGRTCTELENGDLAVDTEQR
RPTQPDDVAGLGQTEALVGSVTSQISAIHLTRRDRPSCRSPPSPSSSSPSVEQLGGESEP
SDLQWVMQVDGAEEELPGELENACSDAEDSDFSASAAPHPPLSRIEEPMVLGSEEEREER
PALVPSLFPFIPPTLYFSTANEKVELLPAEQRRLLKWKLSTVTPNVVKYTVDRSHFKVTK
KGHDWLGCWGHHMRSLGFKELGEHQKLNHFPGTFQIGRKDRLWRNLSKMRLRYGKQEFSF
FPRTFILPQDIKRLRKAWEDGGSKQKWIIKPPASARGVGIQVIHKWSQMPHKRPLLVQKY
LHKPYLISGNKFDLRIYVYVPCYDPLRIYIFSDGLVRFASCKYSSSMKTLGNKFMHLTNY
SVNKQNAEYQTNSDDKACQGHKWALKALWQLLGSRGVNTTLIWEKIKDIVIKTVIASEPY
VHNLMKMHVKSPYSCHELFGFDIMLDENLKPWILEVNISPSLHSSSALDVSIKGQMIRDL
LNLAGFRLPQREEEEASPCSSASSSASSSASSSTSSLSGSKPTVSADERVKRSFYLSQFH
VDQDLLVSVLDVLTPEDVRVLAESEDELSRRGDFERIFPSPSSSRYLRFFETQRYFNILL
DQWEQKYWNDWTKRIDLLKALCQERVHLGTSDPAHMWSKCSYVSRFQPQGREETGPLRPS
VVVTSQHDSLDEDCSDCSNPELSSAQSLLLQRLASLSPGNPEQTPPPRA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctgcgccgccatgcccgccaaccagtccctgccctggggaggggtaaagctc
agagctcgctccagcagcgagggcccgcccgccacagacgctgcagtgcctttcaggatt
gaggacaagcggccgaaaaacgagcagttcccccacgagtcggaccagaatctgagtttg
cctcagcgcctcgaaggctttcagaaccagaaccaggtgccgtcagagatgctggagaac
ggctcttcctccagcatcacgatggcggcaacgctgatgcagaacgataagcctgaatgc
aattcggtgcatagaactcttcggaaccatccgcgggctgagagcgtgacgggacggacc
gctgaggagcacggagaccggaacacggctgcagactgtttgtcctcaccgccagtgcct
cgtccgtgccttagtcctcacacccagcagggctcggtgtcctcaaagagggctttcagc
cgcgatggcgccggacccgaaaccagaagcacaagaagactaagcggtgcgccgcggagg
agccggcgggttaaaaccgccgtcaggcagcgttcggcccaaagcagctgcagaagtagg
tctgctaacggcctgctgtcggcgaggggggtttgtctggtggtcatggaagcggcggcg
agcggcaggacctgcacagaactggagaacggggatttggcggtagacacggagcagcgg
cgtcccacacagccggatgacgtcgcaggtttgggtcaaactgaagctttggtcggctct
gtgacctctcagatctcggccatccacctcaccagacgggaccggccctcctgcaggtcg
cccccatccccgtcctcctcctcaccctcagtggagcagcttggtggggagtcggagccg
tcagacctccagtgggtcatgcaggtggatggagcggaggaggagcttcccggcgagctg
gagaacgcctgcagcgacgcggaggactcggacttttccgcctctgcggcgccgcaccct
ccgctttcccgcatcgaggagccgatggtcctgggaagcgaggaggagcgggaagagcgt
ccagcactggtccccagtctgttcccgttcatccctccaaccctgtacttcagcacggcc
aacgagaaagtggagctgctgcctgcagagcagaggcggctgctgaagtggaaactgagc
acggtcacccccaatgtggtgaagtacacggtcgaccggtcccacttcaaagtcactaag
aaaggccacgactggttgggctgctggggacaccacatgaggtctctgggcttcaaggag
ctgggagagcaccaaaagttgaaccacttcccagggacgtttcagatcggcaggaaggac
cgactgtggaggaacctctccaagatgcggcttcgctacggcaaacaggagttcagtttt
ttcccgcgaaccttcattcttcctcaagacataaaacggcttcggaaagcctgggaggac
ggaggctccaagcagaagtggatcatcaagccccctgcatcggccagaggagtaggcatc
caggttatccacaagtggagtcagatgcctcacaagaggcctcttctggtccagaagtac
cttcacaagccctacctcatcagcgggaacaagtttgacttgaggatctacgtctacgtg
ccgtgctacgacccgctcaggatctacatcttctctgacggactggttcgattcgccagc
tgcaagtattcgtcttccatgaagactctgggcaacaagttcatgcacctgaccaactac
agcgtcaacaagcagaatgcagagtaccagacaaacagcgacgataaagcatgtcaggga
cacaaatgggccttgaaggccttatggcaactcctgggctcccgaggcgtcaataccacc
ctgatatgggagaaaatcaaagacatcgtcatcaaaactgtcatcgcctctgagccgtac
gtccacaacctcatgaagatgcacgtcaaatctccgtacagctgccacgagctcttcggc
ttcgacatcatgctggacgagaacctgaagccctggatcctggaggtcaacatatctccc
agccttcactccagctccgccctggacgtgtccatcaaaggacagatgatcagagatctc
ctgaatctcgccggcttccgtcttccacagagagaagaagaggaggcgtcgccgtgcagc
agcgcctccagcagcgcctccagcagcgcctccagctccaccagcagtttgagcgggagc
aaacccaccgtgtctgcagacgagagggtcaaacgaagcttttacctctcgcagtttcac
gtcgaccaggaccttctggtgtctgtgttggacgtcctgactccagaggacgtccgcgtg
ctcgccgagagcgaggacgagctgagccgcaggggcgacttcgagcgcatcttcccgtcg
ccctcgtcatcgcggtacctccgcttcttcgagacgcagagatacttcaacatcctgctg
gaccagtgggagcagaaatactggaacgactggacgaaacgtatcgatctgctgaaggct
ctgtgtcaggaaagagtccatctgggaaccagtgaccccgcccacatgtggtcaaagtgc
agctacgtctccaggtttcagcctcagggacgagaggagaccggcccgctcagacccagc
gtggtggtcacctcccagcacgactctctcgacgaagactgttcggactgttccaaccct
gagctcagctccgcccagagcctcctgctgcagcggctggcctcgctttcacccggtaac
cccgaacaaacaccgcctccacgcgcttga
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