Oryzias latipes (Japanese medaka): 101171297
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Entry
101171297 CDS
T02443
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101171297 (eri1)
03036 Chromosome and associated proteins [BR:
ola03036
]
101171297 (eri1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101171297 (eri1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
101171297 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
DUF6730
CHASE6_C
Motif
Other DBs
NCBI-GeneID:
101171297
NCBI-ProteinID:
XP_004083266
UniProt:
A0A3B3HI41
LinkDB
All DBs
Position
23:20559837..20565051
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AA seq
342 aa
AA seq
DB search
MEEHKENIHTKALNVQKMSNAKEDEKEKPSSRKGPDGESDPPVSPSQPNSDFSHPVYKEI
ALANGHINRMSKRELQVKLSELKLDTRGVKDVMKKRLKSHYRKQKLMQSAAEGGPTDTYY
DYICVVDFEATCEEDNPSDFLHEIIEFPLVLINTHTLQIVDTFQSYVKPELNPKLSDFCV
TLTGITQEMVDEADPFPQVLQRVVKWLQERDLGTKHKYAILTDGSWDMSKFLNIQCRVSR
IRYPQFAKKWINIRKSYGNFYKLPRSQTKLSTMLEKLGMKYEGRPHCGLDDSRNIARIAV
RMLQDGCQLRVNERMHAGQLLAVPSSAPVEGAPPPHTPGSRN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacacaaggagaacattcacaccaaagccctcaacgtgcagaagatgtcgaac
gcgaaggaggacgagaaggagaaacccagcagcagaaaaggtcccgacggcgagtctgat
cctccagtgtcgccctcacagcccaacagtgacttcagccatccggtctacaaagagatc
gctttggcaaacggacacatcaaccgcatgtccaagagggagctgcaggtcaaactgtct
gagctgaagctcgacaccagaggtgtgaaggacgtgatgaagaagaggctgaagagccac
tacaggaagcagaagctgatgcagtctgcagcagagggaggtcccactgacacctactac
gactacatctgcgtggtggactttgaggccacatgtgaggaggataatccctcagacttc
ctccatgaaatcatcgagttccccttggttctcatcaacactcacaccctacagatcgtg
gacacgtttcagtcgtacgtgaaaccggagttaaaccctaaactttctgacttttgcgtc
acgctaacgggaatcactcaggaaatggtggacgaagcggacccgttcccacaagtcctt
cagcgagtcgtgaaatggcttcaggagagagacctgggaacaaagcacaaatacgccatt
ctgacggacgggtcgtgggacatgagcaagttcctcaacatccagtgtcgggtgagccgg
atccgatatcctcagtttgccaagaaatggataaacatcaggaaatcatacggcaacttt
tacaagctgccgcgctcacagacaaagctgagcaccatgctggagaagctggggatgaag
tacgagggccgccctcactgcggcctggacgactcccgcaacatcgccaggatcgccgtt
cgcatgctgcaggacggatgccagctgcgcgtgaacgagcgcatgcacgccggccagctg
ctggcggttcccagctcggcgccggtggaaggagctcccccgcctcacacccctggcagc
agaaactag
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