Oryzias latipes (Japanese medaka): 101171356
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Entry
101171356 CDS
T02443
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101171356
Transcription factors [BR:
ola03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101171356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
101171356
NCBI-ProteinID:
XP_004077618
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Position
15:28701171..28705525
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AA seq
674 aa
AA seq
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MVSHRSTKGASKARRDHINHEIRNMRALLPISQEDQERLSYLHSMAAICTYIRKSGLFQG
LPSGGEAHCSLPCEAFLAALPGFILVTTAEGRLVCVSENVDEHLGFSMLDLLQGDTIYDM
VERSDVEAVQAHLDVGSSSSAERSFVCCMQTSKAFKVQHGSCCSMLVRGSFQLLPPSVAF
PGGELLFVALCTPTVNRLSGAASQSCSSFSSSHRLDMSFAQLSHSVLFFLGRSADEMRGQ
SWYSLMHPEDLSPAANSHTKLIQADEGLQVEVVVRLQCADLSWIWVYIRANRDPENQQIS
CSNFIVSPTEATFLQKKISCDAVGSSSSPNSFDLTQNGPHGERHRTKRQSATDEPDARAR
WESEQDMYCMLCTSSQDSSSSESPVLYSPASSSSPLQLGELHRDLLMEAHECTDQLLSSP
EGSASFYSHPDARLSSHQSPTAFDPPTFGERSPLSSASSSLYGFQPCTSDARLVPDCLFV
SEMCESPAESASLHPHELDLLENPQGGSVVLQELTFPSSLLPPLQSAESDQYDEQERAEI
SVLAQQISSLASSFSRHQNAVTPPSACDWHPGRPPPSPLLPRCELLSDDSLVDSILDMVP
VKNGCHGAISRHPLCSLSRCTGPEALRVPAEQLTSGGAAKDPLGFHQDTELHQLNHCLQS
RFHQAGGPAGETLF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccacagatccaccaagggagcgtccaaagcccggcgagaccacatcaaccat
gagatcaggaatatgcgcgctctgctccccatttcccaggaggaccaggagcgtctgtcc
taccttcactccatggctgccatctgtacctacatcaggaagtctggtctcttccagggg
ctcccctctgggggggaggcgcactgctccctgccgtgtgaggcctttttggcggcgctg
cctggcttcatcttggtcacgaccgctgaaggccggctggtgtgcgtgtcggagaacgtg
gacgaacatctgggtttctccatgcttgacctgctgcagggagacacaatctacgacatg
gtggagcgctccgatgtggaggctgtccaggcacacctggatgttggaagcagctcatca
gcagagaggagcttcgtttgctgcatgcagacctccaaggccttcaaggtgcagcacggc
agctgctgctccatgctggtcagagggagcttccagctcctccctccatctgtagctttt
cctggcggcgagctgctcttcgtggcgctctgcactcccacggtgaaccgtctgagcggc
gcggcgtctcagtcctgcagcagcttcagcagctctcacaggctggacatgagcttcgct
cagctgtcccacagtgtgcttttctttctggggcgttcggcggatgagatgaggggccaa
tcatggtacagtctgatgcatcctgaagatctgtcccctgcagcaaactcccacactaaa
ctgattcaggcagatgaaggcctccaggtggaggtggtggtgaggctccagtgcgccgac
ctgtcctggatctgggtctacatccgagccaacagggaccccgagaaccagcagatcagc
tgctccaacttcatcgtcagtccaacagaagcaacgttcctgcagaagaaaatcagctgt
gatgccgtcgggtcgtcatcgtcgccaaattcctttgatttgacccaaaatggacctcat
ggagaaagacacaggacgaagaggcagagcgccacagacgagccggacgccagagcgagg
tgggagtcggagcaggacatgtactgcatgctgtgcacctcctcccaggacagcagctcc
tcagagagcccagttctctacagccccgcctcctccagctcccctctgcagctgggggag
ctccaccgcgacctcctgatggaggctcatgaatgcacagatcagctgctgtcctcccca
gagggctccgcctccttctactctcacccagacgcacggctcagcagtcaccagtcgccg
accgcctttgacccgcctacttttggagaacgctcgccgctctcctcagcctcatcctcg
ctttacggtttccagccgtgcacgtccgacgcccggttagttccagactgtctgtttgtg
tctgagatgtgcgagagtccggcagaaagtgcatccctgcatccgcatgagctggacctc
ctggagaatccacaagggggcagtgttgtcctgcaggagttgacttttccctccagtctt
cttcctccgctccagtctgcggagtcagatcagtatgatgagcaggagcgagcagagatc
agcgttcttgctcagcagatctcctctctggccagcagcttcagccggcaccagaacgcc
gtcacgccgccgtccgcctgcgactggcaccccggccggcctcccccctcgcccctgctt
ccgaggtgcgagctgctaagtgatgacagccttgttgacagcatcctcgacatggttcct
gtgaaaaacggctgccacggcgccatctccagacacccgctctgctcactgagccggtgc
accgggccggaggcgctgagggttcctgcagagcagctcacctctgggggggccgccaag
gaccctctaggttttcaccaagacactgagttgcatcaactcaaccactgtttgcagagt
cgcttccatcaagcaggtggacctgcaggagaaaccttgttctga
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