Oryzias latipes (Japanese medaka): 101171393
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Entry
101171393 CDS
T02443
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecule (CAM) interaction
ola04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101171393 (slitrk6)
04517 IgSF CAM signaling
101171393 (slitrk6)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_1
LRR_9
LRR_LRWD1
LapA_dom
Tcell_CD4_C
SIT
Motif
Other DBs
NCBI-GeneID:
101171393
NCBI-ProteinID:
XP_004066634
LinkDB
All DBs
Position
2:complement(19675795..19695692)
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AA seq
843 aa
AA seq
DB search
MQGCIIFISLFLTAARSQDIHPSQASSSISESCDSLCSCEVKDGILHLNCEQRNISKISQ
IKIPPGVPFHLNLYKNDLVELRTEEMEGLKGALSLHVGGNSIQELEPGVFSSLGTLKKLH
INSNFLVTLKEDTFQGLVNLEFLQADTNFIQVIEPGAFNKLIRLKVLILNDNSIEFLPNN
IFRFVPLTHLDLRGNKLQTLPYVGFLEHIGRIMELLLEDNSWICDCDILHLKIWMENMRS
QSAIGDVVCSAPQNLKGSILAKVKRDVLCPSHADINLEEPSKSLDMVVTPSSKAFQIPKL
NNAKDDARVPTPSHPPGSPCASHCSCHNHPVSGFLMHCQDGGIQKVSDIGITQRSPTKLI
LTGNMIQKLLKYDFVTYDSLETLNLSNNRIDYIDNETFLSLSSLKKLFLNGNKLEKLFST
MFVGLHNLENLYLEYNLIKEIAPGTFNPLPNLKLLSLNNNQLSSLPAQIFRNVPLAKLNL
RKNLLMHLPVSNVLDQLDSLEQIYLEDNPWDCSCDLLSLKQWVEKLRKDTVVGSILCHTP
KKVMESELRSLHHEALCPGLGTYHPVPPSGEESVTATLGPDGSSGLFISLTDTIPLSVLI
LSLLIFVLMIIFCSAGLVVFMVHRRRRRAKKKAAEEQPNPNTTSSSPIHLHYSMYGQKTT
HHTLTQRTGSATLYEDRSHSPIVQICRNPTYCSQHKEHDTLDYDESGPKHHVCRSIMERE
NTSPLTGNPCPKFRPMGGECQAEFMTLGNPNSLYRNILDRGEKELQQLGITEYFRKNMSQ
LQPAMDLQGPGHQEELKLMEAIMYTRPRKVMLEQMKNEYFELKANLHTEPDYLEVLEHQT
AFN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcagggctgtatcattttcatcagcttgtttttaacggcggcccgatcccaagatatc
catccctcacaggcttcatcctccattagcgagtcttgtgactccctgtgctcatgtgag
gtgaaagacggcatccttcatctcaactgcgagcaaaggaacatcagcaaaatctcccaa
atcaaaatccccccaggcgtccccttccacctgaacctttataaaaatgacctggttgag
cttcggactgaggaaatggaagggcttaagggtgccctttccctgcatgtcgggggtaat
agcatacaagagctggagccaggggtcttcagctccctgggaacgctgaaaaagctccac
ataaacagcaatttccttgtcaccctgaaagaggacacttttcaagggttggtgaatctg
gagtttcttcaggctgacacaaactttatccaggtcattgaaccgggggccttcaacaaa
ctgatccgcctcaaagtcctgatcctcaatgacaactccattgagtttttacctaacaac
attttccgctttgtgccccttacgcacctggacctgcgaggcaacaagctgcagacgctg
ccgtatgtgggcttcttggagcacattggccggattatggagctgctcctggaggacaat
agctggatctgtgactgtgatattttacatttgaaaatctggatggaaaacatgagatcc
cagtccgccatcggggatgtggtttgcagcgcaccgcaaaacctgaaagggagcatcctc
gctaaagtcaagcgggacgttttgtgtccgtcccacgcggatatcaacctggaggagccg
tcaaagtcattggatatggttgttactccttcatccaaagcgtttcagatccccaaactg
aacaatgccaaagatgatgctagggtcccaacaccatcccaccctccaggtagtccctgc
gcaagtcactgttcctgccacaatcaccctgtgtccggctttttgatgcactgtcaggat
ggagggatccaaaaggtctcagacattggaattactcagcgtagtcctaccaaactgatc
ttgacaggaaatatgatccaaaaacttttgaaatacgatttcgttacgtacgacagtttg
gagaccctcaacttatccaacaacagaattgattacatcgataacgagacttttcttagt
ttgagcagcttgaaaaagctgtttttgaatggaaataaactagaaaagctgttctccaca
atgtttgtgggactccacaacctcgaaaatctttatctggaatacaacctgatcaaagag
attgctcctggcacttttaatcccctgccaaacctgaaacttttgtctttaaataataac
cagctcagttctcttccagcgcagatttttcgcaacgtgccccttgccaaattaaacctg
agaaaaaacctgctcatgcatctgccagtgagcaacgtgctcgatcaactcgactcactg
gagcagatttatttagaggacaacccctgggactgcagctgcgacttgctcagccttaaa
caatgggtggagaagctgcggaaagacacagtggtgggctcaattttgtgtcacactcca
aagaaagtgatggagagcgagcttagaagtcttcatcacgaggcgctttgtcccgggtta
gggacctaccacccggtgcctcccagcggtgaggagagtgtaacagccactttggggcct
gacgggagcagcgggttgttcatttccctaacagacaccatcccactttctgtgctcatc
ttaagccttctcatcttcgtcctcatgattatattctgctcagccgggctggtggtgttt
atggtgcacagacggcggcgcagggcgaagaaaaaggcagcagaggagcagcctaacccc
aacaccaccagcagttcccccatccatttgcattacagcatgtatggacagaaaaccact
caccacaccctgacgcagagaaccgggtcggccactctgtatgaagacagatcgcacagt
cctattgtgcagatctgccgcaaccccacgtattgctcccaacacaaggagcacgacact
ttggattacgatgaatccggccccaagcatcacgtctgcagaagcatcatggagagggag
aacacgtcccccctgacgggaaacccctgccccaagttcaggccaatgggcggagagtgc
caggcggagtttatgactcttggaaatcccaactccttgtacaggaacattctggacagg
ggggagaaggagctccagcagcttggaattaccgaatacttcaggaaaaacatgtcccag
ctccagcccgccatggacctgcagggcccggggcaccaggaggagctgaagctaatggag
gccataatgtacacaagaccacgcaaggtcatgctggagcaaatgaaaaatgagtacttt
gaactgaaggccaacctgcacaccgaaccagactacttagaagttctggagcatcagact
gcgtttaactga
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