Oryzias latipes (Japanese medaka): 101171418
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Entry
101171418 CDS
T02443
Symbol
clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
101171418 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101171418 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101171418 (clip1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101171418 (clip1)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
101171418 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
101171418
NCBI-ProteinID:
XP_011477417
UniProt:
A0A3B3HXY2
LinkDB
All DBs
Position
9:complement(12106482..12132519)
Genome browser
AA seq
2225 aa
AA seq
DB search
MSTSKPSGIKAPSKIARPPGPGAAKTAPSTTKVAVADKSAVSAVGEDKKNAEESFQVGER
VWVNGNKPGYIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALKGIFTRPSK
LSRTEGEANGTQTAPPSRAASPTPSIGSVASHTPSIKPATSSSALAAKKAASAQPASNLT
GTNSESVSNLSEAGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEP
LGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVVATPSGLKRSP
SASSVSTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIEQLMAER
DMERAEVAKATGHVGEMEQEISLLREEQEQMEAKMDQLRAMVEAADKEKVELLNQLEEEH
RKVEDLLFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQRELEDTRVATV
SERSRIMELERDLSLRTREVADLQLRVGIQQSSEGSKPDLSPLLEEIKSLRDQLAAQEAK
WKEDVGKYKEKIGQEKLHSEALAQLQAATMRLSSDKEQLEMRLSQAEKENADSVELWRSK
LDSAIACHQQAMEELKVSLSKGSDAQTEELVETKSALEKLKMQYMSALEEAAAKHQAATS
AWTQEMEELKTQLFSLTEDKERLEETLRSSIEKVEEQHLVEMEDVLGKLHAAEIRVKELE
EKDARLAQDTQDKDRETKEQMAEMKALQSQLQKANQELEGLKSKLEDVQNHGNNQVIKVG
EMSSQLEEKQQEVLTLQQSLLTANQKNETLEQEFEALKQKLTDSTDEMTKSAQILHEKLE
ILHQKENECTSLTTELESHRSQLAGMERKLRAGDEKLEQLLKDKNKLENDISEMMKASGD
SSVQLTKMNEDLMQKERRLEELQNQLAEAKEKVAQANEMLQQELSSKEQQIKETKDAHLN
QISSLQEKITTMEKNLAEKDAFVVELKASQEKSLTQASALHVKELETLQSQVDKLNQELS
SSKEKTEHLKKMVSDLQPYKERSQCLSAELESCKHDVDRLSVKVENQTLDLEKKQKEFQE
IQTEKDDLEKQLLNVQTKLCAHESSYKELLVQNENLVATRDDLLKMHEELLTIKRNSSEE
IISKNRELEELKLVLQKVQTECKELQGSKAEQLAQIEELRMQDAEKKDFILKLQQDSQQR
EAKNKKLNEDYEDVCKEKKHLEEALSENKSKFTKEIENVVSERDVARDALKSVDAKKAEM
QEKLNTLNVEKEDLTMKNTQLQTSTEILTKEKDEMASQIKAFGLDTDTLKMEKEELQKKL
SLTKKDLEGSVRECEELRASKNGLAQMLEELKTSSKVTDSEKLQLLQEKEDLLSFQRKVS
NEKEELLREIQELKDKLEVTTHHLSDSNEKFKEVVSSLEQEKQAFLLQNSETEMALHDLR
KDKMSLESALEQQKMNYECLAVEKKELEEKQAKDLREKNDLSLERDKLANDIQTVRDQLD
GVNRINADLVQDKSHLAVLMEDIKSRRDELEAETAALKQERADLHTELQKHLSEGESLRK
GNTELAEKHTKLKDDLEKSASQVDDLKKENLHLQSLQTEVDRKLQLLQSENQVLIDEVQE
FKNQLKTVSDAKRSVEKQLQAESSERKDAISVKDGLSKQIEELQITLTKVTEEREAISSN
LKKADKQKESLMVDIEDLKTQLKQQEEEKENLTKEREQLLSKLEEMDQKITLLTKMKEDL
SSGENNFKQEILTLRTDQDSWLSERSRLQEEVKSLKESVNQLEADNKIQQQERESLEKRC
KDALSEASVSAAMKEDMSSSISRLRAQQDATQQERDEAAQQVRELESQLKNAISKQLEAT
ETSGKTTEALEQLTKEKAVLMKEKSEAQTLLEEIRSSKQEMQTRLEAIMKENSKCKEDLN
SSKEQLSTEMERTKSLSQKIEELQEEVSVKSESMQTLLVENQRLSQELSSNHHEQKDLVK
LKKEHSKLTKDVEELKRSESTLKDQLNREKAAVKQSLHENSALILEKDQHVENLKKELEV
LRGESASVKTLHSTVQFLERDKANLKEQIQRLEKGITAGPNNGSKDSGDDVLDQMREEKE
IAQSQAAIEFLNSVIVDLQRKNGELKDKLEKLAAAALNGNNPNELDNHDGHEKQPEKKKA
PPRLFCDICDCFDLHDTEDCPTQMQMPDTPPHTAYHGNKHEERPYCDICEVFGHWTESCN
DDQTF
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatccaagcccagtgggatcaaagcacctagcaagatagctaggccgcctgga
cctggagccgccaagaccgctccaagcacaactaaagttgctgttgcagacaaatccgct
gtaagtgctgttggagaagataaaaagaatgcagaggaaagcttccaggttggggagcga
gtctgggtgaatggaaataagcccggttacatacagtttctcggagagacacagtttgcc
ccaggacagtgggcaggaatcgtcctcgatgagcctattggaaagaacgatggatctgtg
gcaggagtccgctacttccagtgtgaagccctcaaaggaatatttacccgcccttccaag
ctgtcccgcacagagggggaggctaacgggactcagaccgcaccaccctcccgcgctgcg
tcacccactccttcaattggaagcgtagcctcacacacaccttccattaaacctgcaaca
tcatcaagtgctcttgcagccaagaaggccgcttctgctcagcccgcaagcaacctcacg
ggaacaaacagtgaatccgtctccaacctctccgaggccggatcagtcaagaagggggaa
agggaactgaagatgggggaccgtgtgttggtgggcggtacaaaagcaggagtggtacgt
ttcctcggagaaacagattttgccaaaggtgaatggtgtggtgttgaacttgatgaacct
ctgggaaagaacgacggagcagtggctggcactaggtactttcagtgccaacccaagtac
ggtttatttgctccggttcacaaagtcacacgcatcggctttccctccacgacaccagcc
aaagcaaaaacaacagtgaggaaagtggtggcaacaccatcaggactgaagagaagcccg
agtgcctcatctgtcagtaccatgagctcagtggcatcctctgtcagtgctaaacccagt
cgaacaggcctgctaacggagacatcatcaaggtataatcgaaagatctccggcaccacc
gccctgcaggaggccttaaaggagaagcaacaacatattgaacagctcatggctgaaagg
gacatggaaagagctgaggtcgctaaggccacaggccatgttggagaaatggagcaagaa
atctcattgcttagagaggaacaagagcagatggaagcaaaaatggatcagctgcgtgcc
atggttgaagctgccgacaaagagaaggtggagctgcttaatcagctggaggaggagcat
aggaaggtggaggaccttctgtttcgtgttgaagaagcttgcattacaaagggagatctt
gagacgcagaccagactggagcatgcccacattaaggagcttgaacagagccttctcttt
gaaaagaccaaagctgagaaactccaaagagagttagaagacactagggttgccactgtg
tctgaaagatcacgtataatggagcttgaaagggacctgtctttacgaaccagagaggta
gccgacctgcagctgcgcgttgggattcagcagagctccgaaggctctaagcctgatctc
tctcctttactggaagagataaagtcactcagagatcagctggcagctcaagaagctaaa
tggaaagaagatgttgggaaatacaaagaaaagataggtcaagagaaactccattctgaa
gctcttgcccagcttcaagctgcaacgatgaggctgtctagtgacaaagagcagttggag
atgcgtctaagccaggctgaaaaggaaaatgctgactctgttgagctttggcgttccaag
ttggattctgccattgcttgtcatcaacaagccatggaggaactgaaagtgtctttgagt
aaagggtcagatgcccagacagaagagcttgtggaaaccaaaagtgcattagaaaagctc
aagatgcagtacatgtccgctcttgaagaggcagctgccaaacatcaagctgctacctca
gcctggactcaggagatggaggagctgaagacgcagcttttttcattaaccgaagacaag
gagcggctggaggagacgctgcgatccagtatcgaaaaagtagaagagcagcatcttgtg
gagatggaagatgttcttggaaagcttcatgctgctgaaattagggtcaaagaacttgag
gagaaagatgcaaggctggcacaagacactcaagacaaggacagagaaaccaaagagcaa
atggcagaaatgaaggctttgcagagtcaactgcagaaagcaaatcaggagcttgaaggt
ctgaagagcaagttagaagatgtgcagaatcatggaaacaaccaggttatcaaggttggt
gaaatgagctctcagctggaggaaaaacagcaggaagtcctcactttacagcagagtctt
ctcacagcaaatcagaagaatgaaaccctggaacaagagtttgaagccctgaagcagaaa
ttgacagacagcacagatgagatgactaaatctgcacaaattctacacgaaaaacttgaa
attcttcatcagaaggaaaacgagtgcacatcattaaccacagaactggagtcgcacaga
agccaacttgctgggatggaaaggaagttgagggctggggatgaaaagcttgagcagctt
ctaaaggacaaaaataagctagaaaacgacatttctgagatgatgaaggcatctggtgac
agctctgtacagttgacgaaaatgaatgaagaccttatgcagaaagaaaggagattggag
gaattgcagaatcagcttgcagaagcgaaggagaaagttgcacaagcgaatgaaatgctc
caacaagaactatcaagtaaagagcagcagataaaagaaaccaaagatgcacatcttaat
caaataagtagtcttcaggaaaagatcacaaccatggagaaaaatttggcagagaaggac
gcttttgttgtggagctgaaggcttcccaggagaaatccctgactcaagcatcagcgctt
catgtgaaggagcttgagacgcttcaaagtcaggttgacaaattaaaccaggagctttct
tcctccaaggaaaaaacggaacacttgaagaagatggtgtctgacctgcagccttacaaa
gagaggagtcagtgtctttctgctgagcttgaatcctgcaagcatgatgttgatcgtttg
tccgtaaaggtggaaaaccagaccttagatctggaaaaaaaacaaaaagagtttcaggaa
atccaaacagaaaaagacgacctggaaaaacagcttttaaatgtgcaaactaagctttgt
gctcatgaaagtagttacaaagagcttttagtacagaatgaaaatctggtagcaaccaga
gatgatcttttgaaaatgcacgaggaactactcaccataaagaggaactcaagtgaagag
attatttcaaagaatcgggaacttgaggagctcaaactcgttcttcagaaagtgcagact
gaatgcaaagagcttcagggtagtaaagctgaacaattggcccaaattgaggagcttcga
atgcaagatgcagaaaaaaaggactttattttaaagcttcaacaggacagccagcaaaga
gaagctaaaaataagaaactaaatgaggactacgaagatgtctgcaaagagaagaaacat
ctcgaagaggcccttagtgaaaacaaatccaagttcacaaaagaaatagaaaatgtagta
tctgaaagagatgttgctagagacgctctgaaatctgttgatgctaaaaaggctgagatg
caggaaaaactcaacactcttaacgttgaaaaagaagatcttacaatgaagaacactcag
ctccagacatccacagaaattctaacaaaagaaaaagatgagatggcttctcaaatcaaa
gcttttgggttggacactgacactcttaagatggagaaagaggagcttcagaaaaagctc
agtctcacaaagaaagacctggagggctctgtgcgtgaatgtgaagaactcagagcttct
aagaatggcctggcccagatgctggaggagctcaagacgagcagtaaagtcacagactct
gagaaacttcagcttctgcaggagaaagaagacctgctctcattccaaagaaaagtatct
aacgagaaagaggagctcctcagagagattcaggaattaaaagacaagcttgaggtcacg
acacaccacttgtcagattctaatgagaagtttaaagaagtggtatcctctttggagcaa
gagaagcaagctttcctcctccaaaattctgaaactgagatggctttgcatgatctgaga
aaagacaagatgagcctggagtcggctctggagcagcagaaaatgaattatgagtgttta
gctgtggagaagaaagagctggaggagaagcaggcaaaggatctccgtgagaaaaatgat
ctttctcttgaacgtgacaagctggctaatgacatccaaacagtcagggaccaactagat
ggggtcaacagaatcaatgccgaccttgttcaggacaagtcccatttagcagtattaatg
gaggacatcaaaagccgaagagatgagctggaagcggagacggctgctttgaaacaggaa
agggccgacctacatacggaactgcagaagcatttgtctgaaggcgaaagtctccgaaag
ggcaacactgaacttgcagaaaagcatactaagctcaaagatgacctagagaaatcagct
tcacaggtagatgaccttaaaaaagaaaacttgcatcttcagtcgctgcagacagaagtc
gacagaaaactgcagctgttgcagtcggagaaccaggttctgattgatgaggtccaggag
ttcaaaaaccagcttaaaacagtgtctgatgccaaacggtctgttgaaaagcagcttcag
gctgaatccagtgaacggaaagatgccatctctgtcaaagacggcctttccaagcaaatt
gaggagctgcagataactttgactaaagtcacagaggaaagggaagccatctcgtccaac
cttaagaaagcagacaaacaaaaggagtctcttatggtggacattgaggatttgaaaacg
caactgaagcagcaagaagaagaaaaggagaatctgacaaaagagagagaacagctctta
tctaagcttgaagagatggaccaaaagataactttgctcaccaagatgaaagaggacctg
tcatctggagagaacaacttcaagcaggagattttgactcttcgtacagatcaagacagc
tggctctcagagcgatctaggttgcaggaagaagtgaagagtttgaaagagagtgtgaac
caactagaggctgataataagattcaacaacaggaaagggaaagcctagaaaaacggtgc
aaagatgctctctcagaagcatcggtttcagctgctatgaaagaagacatgtcctccagc
atctcccgtctcagagcgcagcaggatgccacgcaacaggaaagggatgaagccgcccag
caagtcagggagcttgagtcgcaactaaaaaatgccatttctaaacagcttgaggcgaca
gagacctctggtaagactactgaggccctggaacagctcactaaagagaaagcagttttg
atgaaggagaagagcgaagcccagactttactggaggagatccggagctccaaacaggaa
atgcagactcggctggaagcaattatgaaagagaattccaaatgtaaagaagatctgaac
tcatccaaagagcaactttccactgaaatggaaagaaccaagagtctatcccagaaaatt
gaagaacttcaagaagaggtttcagtcaaatcagagtccatgcaaacgctgctagttgaa
aaccaaaggctcagtcaagagctgagcagcaatcaccacgagcagaaggatcttgtaaag
ctgaaaaaagagcactcaaaactcacaaaagacgtggaagagttgaaacgaagcgaaagc
actttgaaggatcagctgaacagagagaaagctgccgtcaaacagtcgctccatgaaaac
agtgccttaattctagagaaggaccaacatgtggaaaacctgaagaaagaactggaagta
ttgcgtggagaaagtgcctctgtgaagacgttgcacagtacagttcagttcctggagcgg
gacaaagcaaatctgaaggagcaaatccagagactggagaaaggcattactgctggtccc
aacaatggtagcaaagactcaggtgatgatgttttggaccaaatgagagaggagaaggag
attgcacaaagtcaggcagcgattgagttcctgaattcggtcattgttgacctccagagg
aaaaatggggagcttaaagacaaactggaaaaactggcagccgctgccctcaatgggaac
aatccaaacgaattggataaccatgatggccacgaaaagcagccagagaagaagaaagcc
ccgccaaggctgttctgtgacatctgtgactgcttcgacctccatgacaccgaggactgt
cccacccaaatgcagatgcccgacacccccccacacaccgcctaccacggcaacaagcac
gaagagcggccgtactgcgatatctgtgaggtctttggccactggacagagtcctgcaac
gatgaccagaccttttaa
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integrated database retrieval system
