Oryzias latipes (Japanese medaka): 101171430
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Entry
101171430 CDS
T02443
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101171430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101171430
03036 Chromosome and associated proteins [BR:
ola03036
]
101171430
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101171430
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101171430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101171430
NCBI-ProteinID:
XP_011481932
UniProt:
H2LZF1
LinkDB
All DBs
Position
14:complement(16496388..16518098)
Genome browser
AA seq
1871 aa
AA seq
DB search
MSAFSSSSKLNLLVNKLHEYLAHSSIEESTGMQSRDVSGQTHTGFSAGNSTGQGAEIGLD
NRFSRRKPSVVIKHSGLDESGESNGSDDFNVLENTNGRLDVTQLPKGTAFVRPEAVDNGR
DEFRGPEFRSRKPNVLRKEFSRKRGGEHVGIVTCTACGRQVNHFQRDSLYQHPVLKVLIC
KACYKYYSSDEISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSGIL
ESKWYCYVCSPEPLFDLVTACNHVLENMESVWSQQRKRSRVEPEKSGLLPQNICLDKWDH
SGMDGSVVFNYNALQVSKEVTKKAKHLVESTNAVNQIFVNFIHSVTKKQQTPSVRVMYFN
SFLAVVKGLKKSLAALEGSLKEEFSDLDLTISWEKIFSNDFDPLEAEADIELNISDERCL
SDLQKLAAEHFEDNDSKSNGFMDGRSLHGHFDKETHEARVSEGIMGLNPTQESHVDITKK
LVVKLTPVAMEQPPSPEEPKRKEEEFQKEKNVTEDEQTSEDGKVELNSSEPLLLEEDKGN
RRSPRVKTTPLRRPSDVKTKTSFSAGDSDTDSDPGEIPDATPATIDKEQSLSRAGDDSDS
DEVPAALLERVAMTQSSDEPQSDEDENQASPNKVAKKCLFWLTKNSPMSPEKMRRKRKMP
DQSSESESSTGIVKAQQDSQTDSSSDDDDSQKQIQHLSSVRSIGTSQLGKRQKKEMTRRQ
RQLQAEENKIKAQQEADSSSSSSSSSEDEQDNDSGSDVSDQKMKPITEGDYEQSGPSWAA
GDDDDDDDDLENRIAKKMLLARIKANYSSGDDISSDEEEESKSKCDQELREDIEDGGTQE
SGKDLASETSDTMSDKSRSRHHLLQLKLTLDEGTSGNNVEAAVEQQNKRAAEKSLTYDGE
SVTNDNGCHDDESMSEELSQSEDDEDEPHRIEVKEIEKACSFEDNAQGTCIWLSDSSTEK
SDQEDEINEDPKPKGTPKGRKEIRKIIEDEELRSETQEALREEEERRKRLADREQQMEDM
REITVIEDELSQVVCPVATKLVLDQDEETKQPLVQVHSNLVTRLKLHQVDGVQFIWDSCC
ESVKKANSTPGSGCILAHCMGLGKTLQVVTFLHTVLLSPNLKFRTALVVCPLNTVLNWAA
EFKKWQENLGKDKVKVTVLSTINQPAERIRALQRWHRDGGVAIMGYKMYTIMSLCPKTNS
EEQKKVLKSVLVDPGPDFVICDEGHILRNESSITSKAMSAIKTQRRVVLTGTPLQNNLVE
YHCMVSFIKKNLLGSLNEFRNRFINPIENGQCADSTPNDVRIMKKRAHVLHSVLAGCVQR
KDYSELTQFLAPKFEYVLAVRVSPLQCKMYRYYLGLDKREDSRPVIAKKKTGANLFKDFQ
VLGRIWTHPWCVHLSQMNKENKRNSRKKNQVVTEAQLSDVHSIAADSVTIEDKGKERMFN
EESPESSSASKGALEAREAADSLKEGWYKNLLSEEDAKVMEHSGKMVVLFEILRIAESLD
DKVLVFSQSLISLNLIEEFLAASHRARDPSSKAGSWIKNVDYYRLDGGMNSSLRKKWADE
FNEVANVRGRLFLISTKAGSLGINLVAANRVVVFDASWNPSYDIQSIYRVYRLGQLKPVF
VYRLLAQGTMEEKIYDRQVTKQSLAYRVVDQQQIERHFTLNELSELYTFEPDLLDDVNSK
KSKRPVSLFPTDLVLCRLLETCRDQIVSYHEHESLLDHKQEEELTEAERKDAWAEYEAEK
EPMDVLLTEGQNMLQTKTNEQLEELFNKCNTNVGSLFAILHKIRFYTVEDYMSRLRQQYP
LMPETELRTKAEIWKQCDEKRSKIQRASCWDSITKQKLALSQIQFILNFRRNQGTHTNVE
PMSTVIPGGPT
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttcagttcgtccagcaaactgaatttattggtcaacaagcttcatgaatac
ttggcacattccagtattgaagaaagcactggcatgcaatcacgtgatgtatctggtcag
acacacacagggttttcagcaggaaactcaacaggccaaggtgcagagataggcctagac
aacagattctcaagaagaaaaccttcagttgtaataaaacactctggactggatgaatct
ggagagtcaaatggaagtgatgactttaatgtacttgagaacacaaatggtcgccttgat
gtgactcagttgcctaaaggtacagcttttgtcagacctgaagctgtggacaacggacga
gacgagttcaggggtcccgagtttcgaagccgaaaaccaaatgtgctgcggaaggaattt
tcaaggaaacgtggaggtgaacatgtgggaattgtaacttgtactgcttgtggtcgtcaa
gttaaccacttccagagagactccttatatcaacatccggttttgaaagtacttatttgc
aaggcttgctacaaatattactcaagtgatgaaatcagcaaggatggagatggaatggat
gagcagtgcaggtggtgtgcagaaggaggcaacttaatctgctgtgacttttgcagtaat
gctttttgcaagaaatgtattctacgaaatctgggacggaaggaactgtccggcatactg
gagagcaaatggtactgctacgtctgtagcccagaaccgctttttgacctggtgacagcc
tgcaaccatgtcctggagaacatggagagcgtgtggagtcagcagcgaaaaaggagtcga
gtggagccagagaaatctgggctgttgccacagaacatttgcttagataaatgggaccac
agtggcatggatgggagcgttgtctttaactataatgctttgcaagtgtctaaagaagtt
accaagaaggccaagcatttagtggagtcaacgaatgcagtaaatcaaatatttgtcaat
tttattcacagtgtgacaaaaaaacagcagactcccagtgttcgcgtaatgtattttaac
tcttttttagctgtcgttaaaggcctaaaaaagtccctggcagcactggagggtagtctt
aaggaagaattcagcgacttggatctgaccatcagctgggaaaagatcttcagcaacgat
tttgatcctttagaggctgaagccgacatagagctgaacatttctgatgaaaggtgcttg
agcgacctgcagaaactggcagctgaacattttgaagataatgattcgaaaagcaatggg
ttcatggatggaagaagcctccatggccactttgataaagaaacgcatgaagcaagagtg
agtgaaggaatcatgggcctgaatcccactcaggaaagtcatgttgacataactaaaaag
ctggtcgtaaaacttacgcctgttgcaatggagcagccgccatcacccgaggagccaaag
agaaaggaagaggaatttcagaaggaaaagaatgtaacagaagatgagcaaacctctgaa
gatgggaaagttgaattgaactctagtgaacccctcttattagaagaagataaaggcaac
aggcgttctcctcgcgtcaagactactcctctacgccgaccaagtgatgtcaaaaccaaa
acatctttttcagcaggagacagcgacactgattcagaccctggggagatcccagacgcc
acacctgccacaattgacaaggagcaaagtttgagcagagcaggagacgactcggactca
gatgaagttcctgctgctctactcgagcgagtagccatgacccaaagctcggacgagccc
cagagtgatgaagatgaaaatcaggcatctcctaacaaggtggcaaagaaatgcttattt
tggctcacaaagaacagcccaatgtcaccagagaagatgcggcgaaagcgcaaaatgccc
gaccagtcatctgagtctgaatcgagcactggaattgtcaaagcccagcaagatagccag
acagactcctctagtgatgatgacgactctcaaaagcaaatacagcacttaagttcagtg
aggtcgataggaacctctcagcttggcaaaagacagaagaaagagatgacaagaaggcag
agacaactgcaggcagaggaaaataaaataaaagctcaacaagaagctgattcttcatcc
tcttcctcctcgtcaagtgaagatgaacaggacaatgactcgggcagtgatgtcagtgat
cagaagatgaagcccatcacagaaggagactatgaacagtcagggccctcgtgggcagca
ggagacgacgacgacgatgatgatgatctagaaaatagaatcgctaagaaaatgctgttg
gccagaattaaagccaactactcttcgggtgatgatatttcttcagacgaggaggaagag
tctaagtcaaagtgtgaccaggagttgagagaagacattgaggatggtggtactcaggaa
agtggaaaggatttggcatcagagacatctgacaccatgtctgataagtccaggtccaga
caccatctccttcaactcaaactcactttagacgagggaacatcaggaaacaatgtggag
gctgcagtagaacaacagaacaagagagcagcagagaagagtctaacctatgatggtgaa
agtgttactaacgataatggttgccatgacgatgagagcatgagtgaggagcttagccag
tcagaggatgatgaagatgaaccccatagaattgaagtgaaggaaatcgaaaaagcttgt
agttttgaagacaacgcgcaagggacctgcatttggttgtctgactccagtacagaaaag
agtgatcaagaagatgaaattaacgaagaccccaaacctaaaggcactcccaaaggccgt
aaggagattcggaaaatcattgaggatgaggagctccgatcagagacgcaggaagctctc
cgggaggaggaggagagacgcaagcgtttagcagaccgagaacaacaaatggaagacatg
agagagataactgtgatagaagacgagctgtctcaagtggtttgccctgttgcaaccaaa
ctggttctggatcaggatgaggagaccaagcagcctcttgttcaagttcacagcaatctg
gttacaagactgaagctccatcaagtggacggagttcagtttatttgggacagttgttgt
gagtcagtaaagaaggccaactccactcctggatcgggctgcattctggctcactgcatg
ggtctgggaaagactttgcaggtggtaaccttccttcacacggtgctgctctctccaaac
ctgaaattcagaacagccttggtggtgtgtccgctcaatactgtccttaactgggctgcg
gagttcaagaaatggcaggagaacttaggaaaggataaagtcaaagtgactgtgttgtct
acaataaaccaacccgctgagcgcatcagagctctgcagcggtggcacagagatggaggt
gttgcaatcatgggatataagatgtacaccatcatgtctctctgccccaaaaccaacagt
gaagaacagaagaaggttctgaaatctgtattagtggatccaggtccagactttgtgatt
tgtgacgagggccacatccttcgcaatgaatcctccataacctccaaagctatgagtgcg
atcaaaacccaaagaagggtggtgctaactggcactccgcttcaaaacaaccttgttgaa
taccactgcatggttagtttcatcaagaagaaccttcttggttctctgaatgaattcagg
aacagattcatcaaccccatagaaaacgggcagtgcgctgactccaccccaaacgacgtc
agaatcatgaagaagcgcgcccacgtgctccactctgtgttagccggatgtgtgcagaga
aaagattactcggagctgactcagtttctggctcccaaatttgagtatgtgctggcggtg
agggtttctcctcttcagtgtaagatgtatcgatactacctcggccttgataaacgtgag
gactctaggcctgttattgcaaagaaaaaaactggagcaaacctgtttaaagacttccag
gttcttggccgaatttggactcatccatggtgcgttcatcttagccagatgaataaagaa
aacaagagaaactctagaaagaagaatcaagttgtaacagaagcacagctaagtgatgtg
cacagcattgctgcagacagtgtaacgattgaggacaaaggaaaagaaagaatgttcaat
gaagagagcccagagtcttcaagtgcctccaaaggagccctggaagccagggaagcagcc
gacagcctgaaggagggctggtacaagaacctgctgtctgaagaggacgccaaagtcatg
gagcactctgggaagatggtggtcctgtttgagatcctcagaatcgctgaaagcttggat
gataaagtgcttgtgttcagccagtctttaatctcactaaacctaattgaagagttcctt
gcagcttctcatcgtgccagagacccctcatcaaaagcgggcagctggattaaaaacgtt
gattactaccgccttgatgggggcatgaattcctccttgaggaagaaatgggccgatgag
tttaacgaggtcgccaatgtccgtggacgcctctttctcatttcaacaaaagcgggatcg
ctgggcatcaacctcgtggcggctaacagagttgtcgtctttgatgcttcgtggaatcct
tcctacgacatccagagcatatacagagtgtaccgcctcggtcagctcaaacctgtgttt
gtataccgcctcttggctcagggcaccatggaggagaagatttatgatcgccaggtgact
aagcagtctctggcctacagagttgttgaccagcagcagatcgagaggcacttcactctt
aatgaactgtctgaactctacacatttgagcccgacctgcttgacgacgtgaactccaag
aaaagcaagagacccgtctctctgtttcccacggacctggtgctgtgtcggctgttagaa
acgtgcagagatcagattgtgtcgtatcacgagcacgaatccctgctggaccataagcag
gaggaggagctaaccgaggcagagcgcaaagacgcctgggctgagtatgaagccgagaaa
gagccaatggatgtactgctcaccgaggggcagaatatgctgcaaacaaagacgaatgag
cagctagaggagctgttcaataaatgcaatacaaatgttggtagcttgtttgcaattctg
cacaagattcgattttacactgtagaggactacatgtcgcgtctgcggcagcagtatcct
ctcatgccagagacggagttgaggactaaagctgagatctggaaacagtgcgatgagaag
aggagcaaaatccaaagggcttcatgttgggattcaatcacaaagcaaaaactggcctta
agtcaaattcagttcattctgaactttcgaaggaatcaaggaacccacacaaatgtggag
ccgatgagcactgtgatcccgggtggaccaacatga
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