Oryzias latipes (Japanese medaka): 101171608
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Entry
101171608 CDS
T02443
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101171608 (clstn3)
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Cadherin related
101171608 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
101171608
NCBI-ProteinID:
XP_004078258
UniProt:
A0A3B3I2D1
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Position
16:20477385..20501067
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AA seq
956 aa
AA seq
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MDRMNFLSLLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPLGSGTVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKQQHVHTFWVTAFDCGKNRAQADAQV
AITVKPSCKPGWMGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLVFSFNGSNHVAV
VPDPVVSALSGDHFTLQLWMRRGGANIQPATTQTRGSRKEEEIIVCSTMKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMFIGACWEPEEKQKEIVNNTIPESKDAVKYVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLTLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGSTGVPLFPELRIICSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELMVDLDVVRERGLEIINTTAYIAITGAESISVYEDILRSIRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHAGELSGHNLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGESTRGGAKEGSGQWDDSALT
IIVNPMESYESRMGISADTEGEGEEDEEAVETPDDASDDQRIIIKKEGRDGSARRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctatccctcctcctcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtcatggag
aatgacaacaccgtgctgctcaacccccctctctttgctctggacaaagacgcccccctt
cactatgctggtgaaatctgtggcttccgagttcataatggccctctgggttcgggtacg
gtccagtttgaagcagtggttctggaccgctccaccggtgagggtctggtccggtccaag
gagccactggattgtgaaagccagcgcgagcacagcttcaccatccaggcctatgactgc
ggggagggacccgacggagtcaacagcaagaaatcccacaaggccacggtgcacgttcgt
gtgaatgacgtcaatgagttctcccctgtgtttgtggagcgccgctacgaggcctcggtc
cctgaaggacgcctatttgatcgaatcgtgcgcgtggaggctttggatgccgactgctcc
ccgcaatacagccagatctgcttctatgacatcatcactcccaatgtgcccttcgctatt
gacaatgatggtaacattaaaaatactgagccattggattcaaagcagcagcatgttcac
accttctgggtgaccgccttcgactgtgggaagaatcgtgctcaggctgacgcccaggtt
gccattacggtcaagccgtcctgcaaacctggctggatgggatggaccaagcgtgtggag
tacacacctggatcaggcagtatccctctattccccagcctgcatttggaaacatgtgaa
gagactgtgtggaacatccaggccaccgtagagctccagactggccacattgggaagggc
tgcgatcgagacagctactctgacagatctgtgcgtcgactatgtggtgctgtcaggggt
gaagtcgacctcctcccacctccatcacctgcagccaactggaccgctgctctgccaact
ctcccttcttcggactcatctttagtcttctcctttaacggatccaaccatgtcgccgtt
gtacctgatccagttgtgtcagcgttgtccggcgatcatttcactctccagctgtggatg
cgaaggggtggagctaatattcagcccgcaaccactcaaacccgaggaagtcgtaaagag
gaggagattattgtgtgcagcaccatgaagaatgatgactcgtactctcattactcgctc
tctgtccacggctgccgtctctccctcttctactggcctgatgtctcagctgcacggcct
gtcaagttcttatggaaactggagcaggtgtgtgacagcgaatggcatcatctttctctc
agtgtccagttcccctccgtgaccttgtatgtggatggtgtgaccttcgaccccgcccta
atccatgataacggagctattcctaacccagcaccccgccaaaggatgttcattggagcc
tgctgggagcctgaggagaagcagaaggagatagtaaacaacacaattccggagagcaaa
gatgcagtgaaatacgttggagggtaccacggcctactgtcaggggtgacggtgcgccct
gggagcgtggagcctcatagcgtggtggagtgtctttacgcctgcagggagggcctggat
tttggagacctggaaactttgggctctggaatgaaggtccatgtgaacccgagccagtct
gtgctggtgctggaaggagacgacattgagagcttcaatcgcgcggtgcagcaggtcacc
tacaggaactcgcttcgatttgccacacctggtgtccgtccactcaagctcaccacttca
ctgagatgtttcaatgaggagagctgtctgactctcaagcaactggaaggatacctggtg
gttctccagcctgatgctccacagatctctctgtcgggggtcggacctcatctggcacgc
ccagcccctgagtttgaaggttccacaggtgttcccctcttccctgagctccgtatcatc
tgctctctgtcacatgctgtcaacacagcagcacaggggatggagggtggagctttgatg
tcggatgctgtagctcacactttggatggctgtgaggtgcagcctttgggggaggagcta
aacccagaaagagaggagcttatggtggacttggatgttgtcagagagagaggacttgaa
atcatcaatactacagcttacattgccatcacaggtgctgaatccatctccgtgtacgag
gacatccttcgctcgatccgctaccgtctagccaagggctctgctcgctttgagcggcgg
ttccgcctgtcttgctctgagatgaacggcagatacaccagcaatgagttgactctggag
gtgaactttcttcactctttggacagcctttatcacccctcccacctgcttgcctcccag
cagcagtttctccatccatcccaccatgctggggagctgagtggacacaaccttcctaat
ccacaccgcaactctgtggtaccaggagcagccactgtcatcattatggtgtgtgtgggt
tttctggttgtcatggtgatcctgggtgtcttccgaatccgttccattcatcgccgaggt
gaaagtacaagaggcggagccaaagagggcagcggtcaatgggacgactctgccctgacc
atcattgtcaacccaatggagtcttatgaatctcgtatgggcatctctgccgacacggag
ggtgagggggaggaggatgaagaggcagtggagacgcctgacgacgccagcgatgatcag
cgaatcatcatcaagaaggagggtagagacggcagcgcccgtcgctactga
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