Oryzias latipes (Japanese medaka): 101171661
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Entry
101171661 CDS
T02443
Symbol
snupn
Name
(RefSeq) snurportin-1 isoform X2
KO
K13151
snurportin-1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101171661 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101171661 (snupn)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
101171661 (snupn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
101171661
NCBI-ProteinID:
XP_020559483
UniProt:
A0A3B3HZE2
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Position
6:10356433..10368477
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AA seq
373 aa
AA seq
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MDDLTQALSTSFAVSKEPNSISAPHPRLSQYKSKYSVLEQSERRRRFLDFQKSKRLNYVN
HARRLASGDWTGADSDGEEDMEKQEEGEQNQGGETEEEGMEIEKRKLPKHYANQLMLSEW
LVDVPSELDTDWLLVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTFYILDVMCWRGHPVYDCPTEFRFFWLQSKVQETEGMSEIAKRNP
FRFVSLQSSECTPASIQKVLAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVADIL
GMAVPEGPLTTKPEYASHQLQQILQHKKPSSEVRPADQSGGYELEYLSTPRLDSEDTLEL
TAQKPRREATMEV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttgactcaagctctttcgaccagctttgctgtgtccaaggagcccaatagc
atctccgccccccatccgcggctcagtcagtacaagagcaagtacagtgtgctggagcag
agtgagcgtcgccggcgctttctagactttcaaaaaagtaaaaggttgaattatgtcaac
cacgcgcggcgcttggccagcggggactggaccggtgcggacagcgatggggaggaagac
atggagaaacaggaggaaggcgagcagaaccaggggggcgagacggaagaagagggcatg
gagatcgagaagaggaagctgccaaagcattatgcaaatcagctcatgctgtctgagtgg
ctggtggacgtaccgtcagagttggacacagactggctgttggtggtctgtcctgtcgga
aagagatctctcatcgttgcttccaagggctccactgcagcgtacaccaaaagcggctac
tgtgtgaaccgcttcccctccctgctgccgggtgggaacagacacaactctgctatggga
aaagactacaccatcttggactgcatttacagcgaggtggacagaaccttctacatcctg
gatgtcatgtgctggagaggccatccggtctacgactgcccgacggagttccggttcttt
tggctccagtctaaagtccaggagacagaggggatgtcagagatcgccaaacgcaatcct
ttccgcttcgtgagtctacaaagttctgaatgcacgccggcatccattcaaaaggttttg
gctgcagaatacagcttcagtgtggatgggcttctcttctatcatcgacagactcactac
acgcccggcagcacccctctggttggctggctccgcccttacatggtggcggacatcctg
gggatggcggttcccgaaggacccctcaccaccaaaccagaatacgccagccatcagctg
caacagatcctgcaacacaagaaaccctccagcgaggtccggcctgctgaccaaagcgga
ggctacgagttggagtacctgtccactccacggctggacagcgaggacactctggagctc
acggctcagaaaccgagacgagaagcaaccatggaggtctaa
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