Oryzias latipes (Japanese medaka): 101171711
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Entry
101171711 CDS
T02443
Symbol
syne3
Name
(RefSeq) nesprin-3
KO
K21761
nesprin-3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101171711 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101171711 (syne3)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
101171711 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KASH
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
101171711
NCBI-ProteinID:
XP_023807155
UniProt:
H2M5W6
LinkDB
All DBs
Position
22:complement(4353889..4369269)
Genome browser
AA seq
1149 aa
AA seq
DB search
MTQQEQQQFRESLEAALSWIQDVQDRLKANDDTQGPRDALKVRLDETKKIYQSKHEGQMK
LADAQMAAQSLLESKDEELHRSTNAKLKELRNMWEETEQSITHCHSRIEWVWLRWSEYLK
AYEEFVLWLEKQRCSLDVDVEQQVGAKEKLWQADQQRVLLSDVRGKAAMLERLLEEAATL
HSTTQDPSVDSQTQESLQESYNDIKYRSEERLALLQRISDEHYEYQDNVDKFQAFLLSKT
KQLTQLMIQDEPKEGKHKAFKALDDSVACKEKTLKCIEVIADGVKANTSPAGAEAVQEEA
EELRLGWQRLRQELSEAGEALGYSLDTPILDPHSPDSHSSRSHSQDSHSQDSHSLDSHRL
DSHRLDSHSLDSHSLGSHSLGSHSLGSHSLDSHSLDSHSLGSHSQGSHSQGSHSLDTTRQ
GSHSLGSHSQGSHSPGSHSQGSHSQGSHSQGSHSQGSHSQGSHSQGSHSQGSHSQGSHSQ
GSHSLDTTRQGSHSQGSHSQGSHSQGSHSQGYHSQGSHSQGSHSQGSHSQGSHSPGSHSQ
GSHSQGSHSQGSHSQGSHSPGSPNLGSHSLDFHSQGSHSLGSHSLDTPNLGSPNMGSHSP
DSHSSRSHNLGSHSQGSHSQGSHSLGFHSQGFHSLDTPNLGSHSQVSHSLYFHSEGSHSL
SSHSLDTTNLGSPNMGSHSPDSHSQGSHSLDSPNLYSHSLDSSNLGSHSQGSHSLESSNL
DSHILGSHNSQSQSQDSLNEYTDRSQQLQRDIGFLRELLKGLDDELDHPQTYSYNIEEQI
VGRWRNFTDTRTKLEEQESQVENLKSQLNELFKFPVDSRFLSEKVLALDVELQSVKSRAT
RLCSESESRARSLLQEPLQEYANWSRDASEALETSAGISDFSQVAEPVRRMELLLRDSND
LHDRLCKLEQKDNLLESLFEPDKASDLLVELSDAIRRQELLNDQLLQEKDRLQGLILETK
DFDVAYKQLDAKMAAFRKRLEAAEVPQDDIFALQSQSLEIHALQTDMKDFMAYLTALGTL
VSTSEENKNRLDGLVDDWRELRGLSEVTRLEKTRTMSNHKDSLRLKLGKDFFNKTKKPWW
NLEPRSFLKPRLLARVCRVALLLWFLLLALLLLASFLLPFVDESNSCSFTNNFARSFNIM
LRYHGPPPT
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaggaacagcagcagttcagggagagcctggaggcagcgctctcctggatc
caggatgttcaggacaggctgaaggccaacgacgacacacaggggccccgtgacgccctg
aaggtccgacttgacgaaacaaagaaaatctatcagtcaaaacatgaaggccagatgaag
ctggcggacgcccagatggcagcgcagagtcttctggagagtaaagatgaggagttgcat
agaagtaccaacgcgaagctcaaagagctgaggaacatgtgggaggagacggaacagtcc
atcacccactgccacagccgcatcgagtgggtgtggctccgctggagcgaatacctgaag
gcctatgaggagtttgttctgtggctggaaaagcagcgctgcagcctggacgtggatgtg
gagcagcaggtgggagccaaggagaagctgtggcaggcggaccagcagagggtgctgttg
agcgacgtgcgtggcaaggcggcgatgctggagaggctgctggaggaggcggcgacgctg
cacagcaccacccaggaccccagcgttgattcacagacacaggagagtctgcaggagtcc
tacaatgacatcaaatacagaagtgaggagcgcctggccctacttcagaggatcagtgat
gaacattacgagtaccaagacaacgttgacaagtttcaggccttcctgttgtccaaaacc
aaacagctgactcagttgatgatccaggacgagccgaaagagggaaaacacaaagcattt
aaggctttggatgatagcgtggcctgtaaagagaagactttgaagtgtattgaagtcatt
gctgatggagttaaggctaacacgtctcctgcaggggcggaggcggtgcaagaggaggct
gaggagttgagactaggctggcagcggttgaggcaggagctgtctgaagcaggggaagcc
cttggctacagcctagacacccccattctggacccccacagcccagactcccacagctcc
cgctcccacagccaggactcccacagccaggactcccacagcctggactcccacaggctg
gactcccacaggctggactcccacagcctggactctcacagccttggctcccacagcctg
gggtcccacagcctggggtcccacagcctggactcccacagcctggactcccacagcctg
ggctcccacagccagggctcccacagccaaggctcccacagcctggacaccaccaggcag
ggctcccacagcctgggctcccacagccaaggctcccacagcccgggctcccacagccag
ggctcccacagccaaggctcccacagccagggctcccacagccagggctcccacagccag
ggctcccacagccaaggctcccacagccagggctcccacagccagggctcccacagccaa
ggctcccacagcctggacaccaccaggcagggctcccacagccagggctcccacagccaa
ggctcccacagccagggctcccacagccagggctaccacagccagggctcccacagccag
ggctcccacagccagggctcccacagccaaggctcccacagcccgggctcccacagccag
ggctcccacagccagggctcccacagccagggctcccacagccaaggctcccacagcccg
ggctcccccaacctgggctcccacagcctggacttccacagccagggctcccacagcctg
ggctcccacagcctggacacccccaacctgggctcccccaacatgggctcccacagccca
gattcccacagctcccgctcccacaacctgggctcccacagccagggctcccacagccag
ggctcccacagcctgggcttccacagccagggcttccacagtctggacaccccaaacctg
ggctcccacagccaggtctcccacagcctgtacttccacagcgagggctcccacagcctg
agctcccacagcctggacaccaccaacctgggctcccccaacatgggctcccacagccca
gattcccacagccagggctcccacagcctggactcccccaacctgtactcccacagcctg
gactcctccaacttgggctcccacagccagggctcccacagcctagagtcctccaacctt
gactcccacatcctgggctcccataactcgcaatcccaaagccaggactccctaaacgag
tacacagaccggagccagcaactgcaacgggatattggattcctcagggagctgctgaag
ggcctggacgacgagctggaccaccctcagacttactcatacaacattgaggagcagata
gtgggcaggtggaggaacttcacggatacaaggaccaaactggaagagcaggaatctcag
gtggagaacctcaaatctcagcttaatgagctcttcaagttcccagtggactctcgcttc
ctctctgaaaaagtgctggccttggacgttgaacttcagagtgtaaagtccagagcaacc
cggctgtgttcggagtctgagtccagggcgaggagcctcctgcaggaaccgctgcaggaa
tatgccaactggagccgcgacgcttctgaggctttggagacatctgcaggcatcagcgac
ttctcacaggtcgcagagcctgtcagaaggatggagcttttgctgagggatagtaatgat
ctacatgaccgtctctgtaagctggagcagaaggacaacctgctcgagtccttgtttgaa
ccggacaaagccagcgacttgctggtggagctgagcgacgccatccgacggcaggagctg
ctgaacgaccagctgctccaggagaaggaccggctgcagggtttaattttggaaaccaaa
gactttgatgttgcatataagcagcttgatgccaagatggccgctttcaggaagcgtctt
gaggcagccgaagtcccgcaggacgacatctttgcccttcagagccagtcgctggagata
catgctcttcagacggacatgaaggactttatggcttacttgacggctctggggacgctg
gtttccaccagtgaggaaaacaagaaccggttggatgggctggtggatgactggcgtgag
ctgcgggggctttctgaggtgacgcgacttgaaaaaactcgcaccatgtcaaaccacaag
gattccctccgtctaaaacttggaaaagatttttttaacaagaccaagaaaccatggtgg
aatcttgaacccagatctttcctgaagcctaggctgctggcgcgggtgtgccgcgtggct
ctcctgctgtggttcctcctcctcgccctgctgctcctcgcatccttcctgttgcccttc
gtggatgaaagcaacagttgctccttcaccaacaactttgcccgctctttcaacatcatg
ctgcgctaccacgggccgccgcccacatga
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