Oryzias latipes (Japanese medaka): 101171723
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Entry
101171723 CDS
T02443
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101171723 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101171723 (myo5b)
04131 Membrane trafficking [BR:
ola04131
]
101171723 (myo5b)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101171723 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101171723 (myo5b)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101171723 (myo5b)
mRNA cycle factors
P-body specific factors
101171723 (myo5b)
Membrane trafficking [BR:
ola04131
]
Others
Actin-binding proteins
Myosins
101171723 (myo5b)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101171723 (myo5b)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101171723 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
NPHP3_N
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
101171723
NCBI-ProteinID:
XP_023816613
LinkDB
All DBs
Position
12:complement(361696..394230)
Genome browser
AA seq
1841 aa
AA seq
DB search
MTAHTCGRCGLGGTRLMSELRPSESSRRSRRRMKVEYNLYCQFTRVWIPDPEEVWKGAEI
IKDYKEGDPVLHLKLEDETTLEYQVGPNQNPLPFLRNPDILVGENDLTALSYLHEPAVLH
NLRVRFLESNHIYTYCGIVLVAINPYEPLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAY
KQMARDERNQSIIVSGESGAGKTVSAKYAMRFFATVGGSSTDTSVEEKVLASSPIMEAIG
NAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCA
SASLPEFQDLGLTSAEDFTYTSLGENIFIEGVNDAEDFCKTREAFTLLGIKDSSQSSIFR
IVASILHLGNIQICSERDGESCHILRDDAHLQSFCKLLGVELQQMEHWLCHRKLVTASET
YVKSMGAKQAVNARDALAKHIYARLFDWIVEHINKALHTSSKQHSFIGVLDIYGFETFEV
NSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKELIPWTLIDFHDNQPCIDLIEARLGIL
DLLDEECKVPKGTDQNWAQKLYKQHSNSAHFQKPRMSNISFIVIHFADKVEYQCDGFLEK
NRDTVYEEQINILKASQFQMVADLFLDKDDAPPSSKPSRVNVRALKSTPKAPNKEHRKSV
GLQFRSSLHLLMDTLNATTPHYVRCIKPNDLKEAFSFDSRRAVQQLRACGVLETIRISAA
GYPSRWTYLEFFSRYRVLMKRSDMTAADKKLVCKNLLETLIKEPDMFQFGKTKIFFRAGQ
VAYLEKLRADKFRSACIAIQKTVRGWLQRIRYRKIRRSAVALQRYGRGYLARRYAEFLRH
SRAALFCQKQYRMVRERRAYLRKRRAVVTIQAFTRGTLTRRIYWEFLLHHKAMIIQKHVR
GWLQRRRFRRARAAAVVIQCAFRCMQAKRLLKQRKIEARSAEHLKKLNTGMEMKIVQLQR
KMDDQTKELKVQNEQLVTVNVTLGSEVSKLQKELQEVRSHRSDGGRELQEELERLRQQLQ
EAIAARKKLEEEHASEKTELSQRVEELEEENTLLKSQKEELNQQIQQQSRNSKVEASSAS
LLAELDEERRRYQNLLKEFSRLEQRYDNLKEEQSLNKFQPGHRRNPSNQSSLESDSNYPS
VSTSEVGDTEDSIQLVDEMGMEKAAMDISLFMKLQKRVRELEQERKRLQLNLDKMEELSR
RKGSEPRSPVSEQETADLAYDNLKRQELESENKKLKNDLNDLRKTLSAAPDGPSSELQDG
YNLLLRQLRAANEELDARKEEVLILRTQIVSKAQQQENGQNVEPDGGPDRGSREPPDADS
DLTDYHGLSESKKLLEAQLQSQSRTHRDELEALHTQIELLKDDLEKKQEILNYTSSLSPE
ARVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEAAVAAQGASS
RPELSRQVTVQRKEKDFDGMLEYSKEDEARLIKALISDVRPSSVSATVPCLPAYILFMCI
RHADHVNDDQKVESLLTSTINTIKKVLKKNNEDFEMISFWLANTSRLLHCLKQYSGDEAF
MTQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPS
LAGVKPMGYRNRSHSMDTDDGPSSYTLEALIRQLGQFHAVMQEHGLDPEIIGQVVRQLFS
CINANTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWLRANNLLQSKAAATLEPIIQAAQLL
QVKKKTTQDAEAICTLCTALTTQQIVKILNLYTPLNEFEERVTVSFIRGIQNRLQERNDP
PQLLLDTKFTFPVLFPYAPSALSLDALHIPASLGIDFLVRV
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcatacctgtggcaggtgtggtttgggcgggactcgcctgatgtctgagctc
agaccgtctgagagcagcagacgctctagacggaggatgaaggtggaatacaacctctac
tgccagttcacacgggtctggatcccagacccggaggaggtctggaagggtgcagagatc
atcaaagactacaaagaaggagatcctgtgctccatctaaagttggaggatgagacgact
ttggagtaccaagtgggtccaaaccagaacccgctgccgttcctgcgaaacccggacatc
ctggtgggcgagaacgacctgacggctctcagctacctccatgagcccgccgtcctgcac
aacctgagggttcgattcctggagtccaaccacatctacacgtactgtggcatcgttcta
gtggccatcaacccctacgagcctctgcagatctatggggaggaggtgatcaacgcctac
agcgggcagaacatgggggacatggacccacacatctttgctgtggctgaggaggcctac
aagcagatggccagagatgagcgaaaccaatcgatcattgtgagcggagaatccggcgcc
ggtaagacggtgtctgccaagtatgccatgaggttcttcgccactgtgggcggctcctcc
accgacaccagtgtggaggagaaggttctggcctccagccccatcatggaggccattgga
aacgccaaaaccacgcggaacgacaacagcagccgctttgggaagtacatccagatcggc
ttcagcagacactaccacatcatcggtgccaacatgaggacttacctgctggagaagtct
cgcgttgtcttccaggcagaggaggagaggaactatcacatcttctaccagctctgtgcc
tcggccagtttgccggagttccaagacctcggcctcaccagcgcagaggatttcacctac
acctctctaggagagaacatcttcatcgaaggcgtgaacgacgccgaagacttctgcaag
accagagaggccttcacactactaggtatcaaggacagcagtcagagcagcatctttagg
atcgtggcgtccatccttcatctaggaaacatccagatctgctcggagcgagacggagaa
tcctgccacatcttgagggacgacgcccacctccagagcttctgcaaactcctgggggtg
gagcttcagcagatggagcactggctctgccacaggaagctggtgacggcgtccgagacc
tacgtgaagagcatgggcgccaagcaggcggtcaacgcgcgcgatgcgcttgccaagcac
atctatgcccggctgttcgactggattgtggagcacatcaacaaggcgctacacacatcc
agcaagcagcactccttcatcggcgtcctggacatctacgggttcgagaccttcgaggtg
aacagctttgaacagttctgcatcaactatgccaacgagaagctgcagcagcagttcaac
tctcatgtcttcaaactggagcaggaggaatacatgaaggagctgatcccgtggacgctg
atcgacttccatgacaaccagccctgcatcgacctgatcgaggcgcgactcggaatcctg
gacctgctggatgaggagtgtaaggttccaaagggaacggaccagaactgggcccagaag
ctctacaagcagcactccaacagcgcgcacttccagaaacctcgaatgtccaacatttcc
tttatcgtcatccatttcgctgacaaggtggagtaccagtgtgacggcttcctggagaag
aaccgagacacggtgtatgaagaacagatcaacattctgaaagccagccagtttcagatg
gtggccgatctgtttctggacaaggatgatgccccgccctcttccaagccctccagggtg
aacgtcagagctctgaagtcgactccaaaagctcccaacaaggagcacaggaagtcggtg
gggctccagttccgctcgtctctgcacctcctcatggacacgctgaacgccaccacgccc
cactacgtccgctgcatcaaacccaatgaccttaaggaggccttctcgtttgattcccgg
cgagctgtgcagcagctccgggcttgtggagttctggagacgatccggatcagcgctgct
gggtatccgtcgcggtggacgtacctggagttcttcagccggtaccgggttctgatgaag
agatccgacatgactgctgcagataagaagctggtctgtaagaatctgctggagacgctg
attaaggaaccagacatgttccagtttgggaagacgaagatcttcttccgggccggccag
gtggcttacctggagaagctgcgggccgacaaattccgctccgcctgcatcgccatccag
aagacggtccgggggtggctgcagaggatccggtaccgcaagattcgcagatctgccgtg
gcgctgcaaagatacgggagggggtacctggcccgcaggtacgcagagttcttgcgccat
agccgggccgccctgttctgccagaaacagtaccgcatggtgagagagaggcgggcctac
ctgaggaagaggagggccgttgtcaccatccaggcgttcacccgaggaacgctgacccgc
aggatctactgggagttcctgctgcaccacaaggccatgatcatccagaagcacgtgcgc
ggctggctacagagaaggaggttcagacgtgcgcgcgccgccgccgtggtcattcagtgt
gcgttcaggtgcatgcaggccaaacggctactgaagcagcggaagatcgaggcgcgctcc
gccgagcacctgaagaagctgaacaccggcatggagatgaagattgtgcagctgcagagg
aagatggacgatcagaccaaagagctgaaggtccagaacgagcagctggtgacggtaaac
gtcactctgggctccgaagtctccaagctgcagaaggagctgcaggaggtccggagccac
cggagcgacggaggccgggagctgcaggaggagctggagaggctgcggcagcagctgcag
gaggccatcgccgccaggaagaagctggaggaggagcacgccagcgagaagacggaactg
tcacagagggtggaggagctggaggaggagaacactctgctaaaaagccagaaggaggag
ctcaaccagcagatccagcagcagagtaggaacagcaaagtggaggccagcagtgcgtct
ctgctggcggagctggatgaggagcgacggcggtaccagaacctcctgaaggagttctcc
aggctggagcagcggtacgacaacctgaaggaggagcagagcctgaacaaattccaacca
ggacaccggaggaacccgtccaaccagagcagcctggagtcggactccaactacccctcc
gtctccacctcggaggtgggagacacggaggactccatccagctggtggacgagatgggg
atggagaaggccgccatggacatcagtctgttcatgaagctgcagaagagggtccgagag
ctggaacaggagcggaagaggctgcagctcaacctggacaagatggaggaactttcaagg
cgcaagggctcggaaccgagaagtccagtttctgagcaggagactgcagacctggcgtac
gacaacctgaagagacaggagctggaatcggagaacaagaagctgaagaacgacctgaac
gacctgaggaagacgctgagcgcggcgccggacgggccgtccagcgagctgcaggacggt
tacaacctgctgctccgccagctgagggccgccaacgaggagctggacgcccgcaaggag
gaagttctgatcctgaggacccagatcgtgagcaaggcccagcagcaggagaacggccag
aacgtggaacctgacggaggtccagaccgcggcagcagagagcctccggacgccgactct
gacctgacagactaccacggactgtctgaatccaaaaagctgctggaggcgcagctgcag
tctcagtcgcggacgcatcgggacgagctggaggctctgcacacgcagatcgagctgctg
aaggacgacctggagaagaagcaggagatcctcaactacacctcctctctgtccccggag
gcgcgggtggagtacagcgtgcagcaggagatcaccaggctcaccaacgacaacctggat
ctaaaggagctggtggagaagctggagaagaacgagaggaagctgaagaagcagctgagg
atttacatgaagaaggtccaggagctagaagccgccgtcgccgctcagggcgccagctcc
agacccgagctgagccggcaggtgaccgtccagaggaaggagaaagacttcgatggcatg
ctggagtacagcaaggaggatgaagcccgcctaatcaaggctctgatctcagacgtgcgg
cccagctcggtgtccgccaccgtcccgtgtctgcccgcctacatcctcttcatgtgcatc
cgccacgccgaccacgtcaacgacgaccagaaggtggagtctcttctcacctccaccatc
aacaccatcaagaaggtcctgaagaaaaacaacgaggacttcgagatgatctccttctgg
ctcgccaacaccagccgactgctgcactgcctgaagcagtacagcggagacgaggccttc
atgacccagaacactgccaagcagaacgagcactgcctgaagaactttgacctggccgag
taccggcaggtgctgagcgacctgtccatccagatctaccagcagctcatcaaggtggcc
gaaggcatcatccagcccatgatcgtgtcggccatgttggagagcgagagcatccccagc
ctggcgggcgtgaagcccatgggctaccggaaccgctcgcacagcatggacaccgacgac
gggcccagcagctacaccctggaggcgctgatccggcagctggggcagttccacgccgtc
atgcaggaacacgggctggatcctgagatcatcgggcaggtggtgcggcagctgttcagc
tgcatcaacgccaacacgctcaacaacctgctgctgcgcaaggacgtctgctcatggagc
accggcatgcagctcaggtacaacaccagccagatggaggagtggcttcgagccaacaac
ctgctccagagcaaagccgccgccacgctggagcccatcatccaggcggcgcagctgctg
caggtcaagaagaagaccacgcaggacgccgaggccatctgcacgctctgcaccgcgctc
accacgcagcagatcgtgaagatcctgaacctgtacacgcctctgaacgagtttgaggag
cgggtcaccgtctccttcatcagaggcatccagaaccgcctccaggagaggaacgacccc
ccccagctcctgctggataccaagttcaccttcccggtgttgttcccgtacgcgccgtcc
gctctgagtctggacgcgctgcacattcccgcctcgctcggcatcgacttcctggtcagg
gtgtga
DBGET
integrated database retrieval system
