Oryzias latipes (Japanese medaka): 101171781
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Entry
101171781 CDS
T02443
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101171781
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101171781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
IQ_SEC7_PH
KIAA1755_C
PH
DHC_N2
Spectrin
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
101171781
NCBI-ProteinID:
XP_011485991
LinkDB
All DBs
Position
18:22304320..22353230
Genome browser
AA seq
1721 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQQDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLAAGGRTVQEILVPESQHPLVFTSEWLHSVNKERGHRREVGGGLDTCLVSTSDGVVR
LPWKEIVYPKFIHDPSEEVDLLANKDSPMSKRLPSEGGSSLGGWGDSSSGELDSWSWDEE
EDDASIAHGLVGNPALRRRSSEDGLGRTARQPQLDGDYVELLELRGGPDGRVDNRQRYLE
MHGISKTKTLPLCRRGKAIKLRRGKAWGHWKMERSGSFRAIVGARGDLSTTKEEVLPPQP
LRGVAETGKGRRPCSAHDSDEGNKGSTGSAVPEIRGICFGGPRRPGVGRERDSSGVTHAC
SDRRKDSQSSDNMLTIGIHGLNHKPASEGQSDQGSQSDSVFEDSDKRLSWDSDPATPTSD
APQRPLAQVCVGQNDTCSGSTTKNLPKPKLADDKDEGKTEDRACPRGKDIKTAGFRAPRR
RRKGKGARGRARSGGRPKQKASKVQGKASPASPPSCSASAKHSNAEKTQPEQTELADGEE
GGPTTTAEAKHSRRRSRAETETESLCHVQSGTSCPGPLCGEPCPAEAHPDLQTRVTSKEP
VLLRQLDAELLQSGVLQLTGTVDRLGRALVFTEAGSLKEGFCVEEAAQILACFHRITRPT
AREKGLTVLLDSRRFPPSDLCLSALKRFQALVPGGLGSVLVLVEEQEELLSHTVHGTEVH
LVKGTAVLQQYVDKQQLLKELDGDFSHSHSDWLAFRLRLESLAEHCESALCLLGEAQQEL
ETEPMPDDIKAVPQSIDKHRRLMANVLADQRLTELQQRGGAWLAGLTNCSSGLGQKSPDC
RAALAAASQLYDSVDHALHQLVQVSNQRGRNLEALGQLAGLVDKLEKCDKEIEEVQLQLE
DYRDPPLSLSRLSLKQQKFRTFRETVNELHSETLAVLSDLEGWNQLNWAGLSQVQIRLPP
VREKLRDMSHCLSDCWTTLDHTQRLLSTLTEATQWCDAVCSASSTCPLSSLPPIPPSRFQ
DARSLAMELGGGPLMDLWTQTVERYQRTVAQVKPRFLQSERTQGQGKPKTPSLPSQWDLL
GPDSENEWGLGAGGGEGGLQSWGSLASLFRPQTCSTLKIGDEKGSKKDTTGGGNGGGAGG
GKFLQNLLNPAKKSPPEAPLPPKPPRKRHPSFDLQALLAPRKGAATPKSVESPAFGASRS
SPMSWLGRRALADPVITTSMAAAVPDWASGRGGGVLIRGVEVSSKEVVDHTGSPRQHVLL
GRADRDAGADKGSSAQSKPYLLWCRMLSSERQYVAILKGVEETYLPLLELSDSPASLRGK
GELLFSNWSSLSTFHSQSLLPAMEGALVQSLLQQDCFSKYRDHFLQYSHYIRSKPELDSP
LVMQAADFFKSKLPQASPLPPLSFPQCLQAPIQRLEQYCEALIELGGLNPASDSALSVLR
HAQRHGEDLRASDLIIGCPIPVAERGELVRQGELTACGGVRRKRAGVRNVFLYQNILIFT
KQKSPTAGHSTYSYKHSIKTGEMGLTQSVGDDGLKFEVWVRQAPRSKASIILQARDREDR
AGWAHDIAHLLWTHAINNTELCLKESLCMGISSKLLLDATGGAASELDSACSLSDRVHSS
CSDSSSVGSQKEGGSPASGRDPQTCSGSTSHSQNLCPSTAV
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggcaatggaggactgtgtgcagggggcgctctcctcactctacccccct
tttgagagcacagcgccacccctcctctctcaggtcttctcagtcctggagtcaacttat
caacaggacagtctccgctacctcctcgactactttgttccagccaagcacctcctgcac
aaactccagcagcacgcctgttctcagtacctcgggtgtctgttcctccactccggctgg
cctctctgcctgggtgaaaaggtggtggtccagctctccaccttggactggaggctcctg
cgcagtaatgacttctacctgcaggtggtgcccttttcaacccgctgccccagactcgcc
ctgaaatgtctggctgctgggggtcgcaccgttcaggaaatcttggtgcccgagtcacag
caccctctggtgtttacctctgagtggcttcacagcgtcaacaaagagcgaggtcacagg
agagaagttgggggagggcttgacacctgcctcgtcagcaccagcgacggagtggtacga
cttccttggaaagagatagtctacccaaagtttatccacgatccctctgaagaggtggac
ctcttagccaacaaagacagtccaatgagcaagcgactccccagtgaaggaggcagcagt
cttgggggttggggtgactcatcttcaggggaactggactcctggtcctgggatgaagag
gaagatgatgcctcgatcgcacatggtttggttggcaatcctgcgctcagacgaaggagc
agtgaagatggtcttggacggaccgcgaggcagcctcagctggacggtgattatgtggag
cttttggagctcagagggggcccagatggaagggttgacaacaggcagaggtacctagag
atgcatgggatctccaaaaccaaaacgttgcctctgtgcaggagaggtaaagccattaag
cttcgcagaggaaaagcgtggggacattggaagatggaaagatcaggaagttttcgagca
attgttggtgccagaggagatttgtctacaaccaaagaagaagtgctacccccacagcct
ctaagaggtgtggcagaaaccggtaagggaaggaggccatgctctgcacatgactcagat
gaaggaaataaaggaagcactggctctgcagttccagaaatcagaggtatctgctttgga
ggtccaagacggcccggtgtgggtcgagaaagagacagcagcggggtcacacatgcctgc
agcgacagaaggaaagattcccagagcagcgacaacatgctcaccattgggatacatggc
ttaaaccacaaacctgcttcagagggtcagtcagatcaaggatcccaatccgactcagtt
tttgaggactctgataaacggctgagctgggacagcgatcctgctacccccacatcagac
gcaccacaaagaccactcgcacaggtctgtgtgggccaaaatgacacctgcagtgggtct
acgaccaagaatttgcccaaaccaaagcttgcagacgacaaggatgaaggaaagactgag
gatcgagcgtgtcctagggggaaagacatcaaaactgcgggattcagagcgccacggagg
agaaggaaggggaaaggagccagagggagagccaggtctggtggccgtccaaagcagaaa
gcctcaaaagttcagggaaaagcttctccggccagcccccccagctgctctgcatctgct
aagcattcaaatgcagagaaaactcagcccgagcaaacagaactggctgacggggaggaa
ggaggtcccacaacaactgctgaggcaaaacacagcagaaggagaagcagagcagagaca
gaaacggaatctctgtgtcatgtccagtccggtacatcttgccctggccccctctgtggg
gaaccctgccccgcagaggcccaccctgacctgcagaccagagtcacctccaaagagccg
gtgctgctccggcagctggatgcagagttgctgcagtcaggggtgctgcagctgacaggt
acggtggacaggctggggcgggcgctggttttcactgaggccgggtctttgaaggaggga
ttctgtgtggaggaggcggcccagattctggcctgctttcacagaatcacccgacctaca
gccagagaaaaaggtctgacggtgctgctagacagcagacgctttcccccctctgacctc
tgcctttctgcactgaaacgcttccaggcgctggttcccgggggtcttgggtcagtcctg
gttctggtggaagagcaagaagagcttctttcccacactgtacatggaacagaggtccac
ctggtgaaggggacagcggtgctgcagcagtatgtggacaagcagcagctcctcaaagaa
ctggatggagacttcagccactcgcactcagactggctggccttcagactgagactggaa
agcttggcagagcactgtgagagcgccctctgtctgctgggagaggcccagcaggaattg
gagactgagccaatgccggatgacatcaaggctgttccgcagagcatcgacaagcacagg
cggctcatggccaacgtgctcgccgaccagcgcctaactgagctccagcaaaggggcggg
gcctggctcgcggggttgacaaactgttcatctggattaggacagaagtcgcctgactgc
agggccgctctggccgcagcctcccagctgtatgacagcgtggaccacgctctgcatcag
ctggttcaggtgtccaaccagagaggccgcaatctggaagcgctgggacaactggcagga
ctggtggacaaactggaaaagtgtgataaggagattgaggaagtgcagctgcagctggag
gactacagagatccccccctgtccctcagcaggctgtcgctcaaacagcagaagttcagg
accttcagagaaacggtcaatgagctgcacagtgagactctggctgttctcagtgacttg
gagggctggaaccagctgaactgggccgggctcagccaggtgcagatccgacttcctccg
gtcagggagaagctgagagacatgtcgcactgtttgtcagactgctggaccactctggac
cacacgcagaggctgctgtccaccctgaccgaggctacccagtggtgtgatgcagtctgc
tccgcctcctccacttgccctctctcttccctccctccgatccccccctcacgctttcag
gatgctcggtctttggctatggagctggggggcggacccctcatggacctctggactcag
acggtggaacgttaccagcggactgttgctcaggtcaaacccaggtttcttcagtctgag
aggacgcagggccaggggaagcccaaaaccccctccctccccagccagtgggacctgttg
ggccctgactcagagaatgagtgggggctgggggctggaggaggtgaagggggcctgcag
tcatggggttccctggcttccctgttcagaccgcagacctgctccactctgaagatagga
gacgagaaagggagtaagaaagacaccacaggaggaggaaacggaggaggggccgggggc
gggaagttcctacagaaccttctcaatcctgcaaagaagagtcctccagaggcccccctc
cctccaaagccacccagaaagcgccacccgagttttgacctccaggctctcctggctccc
cgtaaaggcgcagccactcccaaatctgtggagtctccagcatttggagcgtctcgtagc
tcccccatgtcctggctggggagacgagccctggccgacccagtcatcaccaccagcatg
gcagcagctgtccctgattgggccagtgggagagggggaggggttctcatccgaggggtg
gaggtcagtagcaaggaggtggtggaccacacagggtcacccaggcagcatgtcctgctg
gggagggcagacagagacgcaggcgcagataaagggagttctgctcagagtaagccatac
ctgctgtggtgccggatgctgagctcggagaggcagtatgtggccatcctgaagggggtg
gaggagacttacctgccgctgctggagctctcggatagccccgcctctctgagggggaaa
ggggagttgctgttctccaactggagcagcctcagtacctttcactcccagagtctgctc
cctgccatggagggcgctctagtgcagagtctcctgcagcaggactgcttcagcaaatat
cgagaccactttctccagtattcccactacatcaggtccaaaccagagctggactcccct
ctggtcatgcaggctgctgactttttcaagtccaaactcccccaggcctcccccctccct
cccctctccttccctcaatgcctgcaggcccccatccagaggcttgagcagtactgtgag
gcgctgattgaactggggggccttaaccccgcttcagactccgccctctctgtcctcaga
cacgcccagcggcatggcgaggacctcagggccagtgacctcatcattgggtgtccgatc
ccagtggcggaacggggcgaactggtccggcagggcgagctcacagcctgtgggggggtc
cggaggaagcgtgcaggtgtcaggaacgttttcctgtaccagaacattctgatcttcacc
aaacagaagagtccaactgcagggcactccacctatagctacaagcacagcatcaagacg
ggtgagatgggtctgactcagagcgttggggacgatgggctgaagtttgaagtttgggtc
cgacaggcgccgcgatccaaagccagtatcattctgcaggcgcgggacagggaggacagg
gcgggctgggctcatgacatcgctcacctgctgtggacgcacgccatcaacaacactgag
ctgtgtctgaaggagtctctctgcatgggaatttccagcaaacttctgctggacgcgaca
ggaggtgcagcgtcagagctagactctgcctgcagcctcagcgacagagttcacagtagc
tgctccgactcgtcctccgttggcagtcagaaggaggggggatccccggcgtctgggagg
gacccccagacatgctccggatctacaagccactcacagaacctgtgtccctccacagct
gtgtga
DBGET
integrated database retrieval system
