Oryzias latipes (Japanese medaka): 101171810
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Entry
101171810 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101171810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101171810
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101171810
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101171810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
fn3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
ZNF512_C2H2
NDNF
AAR2
Motif
Other DBs
NCBI-GeneID:
101171810
NCBI-ProteinID:
XP_004066635
UniProt:
H2LIN6
LinkDB
All DBs
Position
2:complement(20567385..20641375)
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQNIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPHSGPNSPCEESSNRLAL
VPVSAAMSNPGSPPEPVQCQFCELDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHDEEKVNMYCVSDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDVLIDIIQQRRQII
GSKIKEGKAQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPSIREELCTASYDTIS
VHWTSDDEFSIVSYELQYTIFTGQSNIASLCNSLDSWMIVPNIKQNQYTVHGLQSGTKYV
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQD
RFSSQSSYGVVGNVFIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNQASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHISFIQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPSN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggaatcagagctgacctgcccaatctgcctggagctctttgaagaccct
ctgctgctcccctgtgcccacagcctgtgttttggctgcgcccaccgcatcctcatctcc
cactgcgccaccaacgagtctgtccagaatattggcgctttccagtgccccacctgtaga
tatgtcatttccttgagtcctgagcgtggactagaaggactcaagagaaacgtcaccctg
cagaacattattgacagagttcagagagcctcgtcttcagctggactccctttgcctctg
ccggcccctcacagcgggcccaactctccctgcgaggaaagcagcaatcgcctggcactg
gtccccgtcagcgccgccatgtccaacccgggctcacctcccgagccggtgcagtgccag
ttctgcgagctggacccgccgcaggacgccgtgaagacgtgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctcagagcaacgcaccccaacaagaagccattcacgggccaccgg
ctcatcgagccgatgcccgactcgcacctcagagggctccagtgtctggagcacgacgaa
gagaaggtcaacatgtactgtgtcagcgatgaccaactcatctgctctttgtgcaaactg
gtcggccggcacagagaccaccaggtggcagcactaagcgaccgctatgaaaaacttaag
caagccctggattccaacctgagcaatctaatcaagagaaacaacgagctggagtctctg
atgggaaaactgatccagacgtgtcaacatgtggaggtgaacgcatcccgtcaggagggc
aagctcatggaggagtgtgatgtcctgattgacatcattcaacagaggaggcagatcatt
ggcagcaagatcaaggaggggaaggctcagaggcttcgaaagctcgcccaacaaatttcc
aactgcaagcagtgcatcgagaggtcctcggccctcatcacgcaagctgaccagacgctg
aaggaaacggatcacgctcgcttcctgcagacggccaagagcatcaacgagagggtctcc
atggcaactgcatctacccaagtactgatccctgagattcacctgactgacacctttgat
actttcgcgctggacttcaccagagagaagaagttgttggagaacctggattacctcact
gctccgagtgctccatccataagggaagagctgtgcacggcgtcgtacgataccatcagc
gtccactggacatctgatgatgagttttccattgtgtcctatgagctccagtacaccatc
ttcacaggacagtccaacattgccagtctttgtaactcgctagacagttggatgatcgtt
cccaacatcaaacagaaccagtacacagtgcacggcctccaaagcggcaccaagtacgtc
tttgtcgtcaaggccataaaccaagcaggaagcaggagcagtgaaccgggaacgctgaag
accaacagtcaaccgtttaaactggaccccaaatctgcacacaagaagctgaaggtgtca
cacgataacctgacagtggagcgagatgaaaccacatctaagaagggccacagccaagac
cggttttccagccagagcagctacggtgtggtggggaacgtctttattgacagcgggcgt
cactactgggaggctcttattggtggaagcacatggtacgctattggcattgcctacaaa
tcagcccccaagcacgaatggattggcaagaaccaggcctcttgggtactctgccgctgc
aacaactcctgggtggtccgccacaacagcaaggagctggccatcgagccctcgccccat
ctgcgacgggtcggggtccttttggattacgatgccggatacgtcaccttctacgatgct
gtgggctcccagcacctgcacaccttccacatctccttcatccagcctgtgtgccctgtg
tttaacgtgtggaataagtgtctgaccattctcaccggcctacccatccctgaccaccta
gaaggactagaacccagcaactga
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