Oryzias latipes (Japanese medaka): 101171828
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Entry
101171828 CDS
T02443
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101171828 (dennd4a)
Membrane trafficking [BR:
ola04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101171828 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
101171828
NCBI-ProteinID:
XP_023811551
UniProt:
A0A3B3H2F7
LinkDB
All DBs
Position
6:16594106..16620449
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AA seq
1692 aa
AA seq
DB search
MMEDKAPRVADYFVVAGLPDSPKPLEDDLHFDDAGARSVKPKAPITDVAVVIRSLGEEVP
AGFTCVETTPTGLSAELNGASLRGPQVFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRSPKSQPHTSLAVTDVCVIIPGKGETPPHTFCKVDK
NLNSSMWGSSIYLCYKKSLAKANAIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ERWPTHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPHPEESLTDRQRSQLGLTSSDFGN
DETKTFYSNKSICLLSHWPFFDSFRSFLTFLYRYSISGPHAVPIEKHVSHFMQNVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKEDKKALTWKILPRRACKYLLNTLSKLYQQLIEGGQVNRDDVQMN
HAVTDDELYGGKSLHTLELEIQEAFLRLMAAILRGYRSYLQPITQAPSEKTTDVSSLFDL
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGGKMDG
ERPEDTRLIELDESHGSEHTVYVNPPELPPLPHGEEYPLRYSYSRFPVLSVELLEPLEGP
NPSSAGTASRHSSPSSPTAIFRRSQQEIKSAQRMAKTHSSVPQMWSKCLLRHCYGLWFIC
LPGFVGNCHSKVRALRTAYDVLRKMQEKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVLLGVLQFKQARRKRRTPH
REPQLSDGSDLDTVSHGSMDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERFCSRETDGTALAEEKMLRRADSGSRLASNDTHLYGVLPKTERPKSLDLSGQGFTRL
TVPLLNSPKQHAPASDRLDGVEEEDVESVKQKALDRSVSCTAVRRTGSEVQLDPLSQMAA
EPECDQNSSSSTPSSSRNLVEEIETYMNNSSSPLRSCTPCTDLQNSSSPLFRSPLSGHSP
QSSTLVRSSTHLSLPVRSKERLRPSPSLPLGVCRKDRERPSSLVSPSSPSPSNSSFSMDS
LFTPTLDIFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDANCDRLSVSSLTSAEAECSS
LTENYESSLDPEGFTSPQHSSVSRLRISPVGVCHPSLGSPSSPTGVLRHNSFSGALALPS
KTPHTPSSSPDASRFQPTSNYIIEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTC
PFCGTAFLPFLNAEIKDLKPQNKFSKLSNPVKEEDISATLSPKDNMSEAAQPSVASIHPV
ETSGSAGVSPPASVPTSASDLVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIV
FWNLVWYFRRLELPSNLSALILASQHCSSGDQSLPSVSSEDSRQVLVRIMWDNLKLHRDK
VQPCYVLWNTHCANSLIRSGLCEEGQLFTVELLQSFVRSIKKSDVYQPMTQIIQLLGPEL
GFKRQRSLYRDLLFLSLVALGKNNININAFDREYRLAYDRLTPSQVKLTHNCDRTPGAGV
MECRRTFGEPGL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagctcctcgtgtagctgactacttcgtggttgctggcctccccgac
tcgcccaagccccttgaggatgatctccactttgatgatgccggtgccagatctgttaaa
cccaaagcccccatcaccgacgttgctgtggtgatacgctccctgggtgaggaggtgcct
gcaggtttcacctgcgtagagaccacccccacagggctttccgcagagctcaatggagcc
agcctcaggggtcctcaggtcttcttgtgcttcaagcgaggcagagataagcctccactg
acagatcttggggttctgtatgagtggaaggaaaaattgaaaccaggatgtcacattgtc
caaaccacaccctcgggtcgccctgccaacataagcagctcgtcctcccagcgcatatac
atcacctaccgccgctctccgaagagccagcctcacacttcactggccgtcaccgatgtc
tgcgtcatcataccaggaaaaggggagacaccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcctctatctacctttgttacaagaaatctctggct
aaagcgaatgcaattgcatacaaagcaggtctgttgtgtaggtaccccgaggaggactac
gagtccttccccctgccggagtctgtgcctatgttctgcctccccatgggggcgatgatt
gagcgatggcccactcacaccaaacactccttaccagttttttctacattcgtactaacg
ggggcctcaggagaaaaggtatatggggcagcgatccagttttatgagccgcacccagaa
gagagcctcactgatcgtcagcgctcacagcttggtttgacaagctctgattttggaaat
gatgaaacaaaaactttttacagcaacaagagcatctgcttactttcccattggccattc
tttgactccttcagaagtttcctcactttcctgtaccgatattccatctctggaccccac
gctgtacccattgaaaagcatgtctcacacttcatgcaaaatgtcccatttccatccact
cagaggccccgcatcctcgtgcagctgtctccacatgacagcttgatactgagccaacca
gtgtcctcccccctgcctcttagtggtggcagtctctccacattactgctaaatcttggc
ccaaagaatgcagctacactgctcgttctggctgtcacagagcacaagatcctggttcat
tccttgcgtcctgctgtgctcactagtgttacagaggcccttgtgtctatgatctttcct
tttcactggccatgcccttacatccctctttgtccgctggccctggctgacgtgctcagt
gcgccgtgccccttcattgtgggtctggactcccgatactttgacctttatgtgcctcca
gctgacatcagctgtgtggatttggacaccaacaccatctcccagaaagaagacaaaaag
gctttaacatggaaaatcctgcccagaagagcttgcaagtatcttctgaataccttgagt
aagctctatcaacagctgatagaaggtggtcaggtaaatcgtgatgacgtgcagatgaac
cacgcggtgactgacgatgagctctacggtggaaaaagcctccacactctagagttggag
attcaggaagccttcctccggttaatggcagcaatcctgcggggttaccgttcatacctc
cagccaatcacccaagctccatccgagaaaaccactgatgtcagctcactttttgacctc
caaggcttcctgaagagcagagaccgctcacatcagaggttttactccctcatgaccaaa
actcaaatgttcagtcgtttcattgaagaatgctcctttgtcagtgataaggatgccagc
ctggccttctttgatgagtgcgttgataagttatttaccactggaggcaagatggacggt
gagcgaccagaggacacccggctaattgagttggatgaatctcatggcagtgaacacacg
gtctacgtcaaccctccagagctgcctcctctacctcatggagaagagtatcccctgcgc
tatagctactccagattccctgtgctgagtgttgagctcctggagccactggagggacca
aatccatcttcagcagggactgcttcacgccacagcagcccatccagcccaactgccatc
tttagacgctctcaacaggagatcaaatcggctcaaaggatggccaaaacacattcatct
gtgccccagatgtggtccaaatgtctgctgcgccactgctatggtctgtggtttatctgc
ctgccaggatttgttggcaactgccactccaaagtgcgtgctctgcgcacagcttatgat
gtgctgaggaagatgcaggagaagaagctacaagctccagatgaggtgtgttaccgtgtg
ctactgcagttgtgtggtcagtacagccagccagtcctagctgtgagggtgctttttgag
atgaaaaaggctggagttcagcccaacgctattacttatgggtactacaacaaggctgtg
ctggagagcacgtggccttccaccaccagaggaggctactttctttgggggaaactgagg
aacgtgcttctaggtgtgcttcagttcaagcaagcaagaagaaaacgacggactccacac
agagaaccacagctttcagatggcagtgatcttgacactgtcagtcatggcagcatggac
agtgcaaacgactctgctgagcgcacctccattgacactgacttcaccaaaatggactcc
agtgatgacgggtttagcacaggcggccaatctgaccaaggctacgattctctttccaaa
gaagaggagaggttttgcagcagagagactgacggcacagctttagcggaagaaaaaatg
ctgaggcgggctgacagtggcagcaggctggcttctaatgacactcatctatatggagtt
ttgccaaagacagagaggcccaaatctctagatttgtcaggacagggatttacgaggctc
accgtgcctcttcttaactcaccaaagcagcacgcccctgcttctgacagactggacgga
gtagaagaagaagatgtggagtcagtgaaacagaaagctctggacagaagtgtcagctgc
actgcggtgaggaggacaggctctgaggtgcagttggatcccctgtcgcagatggcggca
gagcccgagtgtgatcaaaacagcagcagcagcacgcccagctccagccgcaaccttgtt
gaggagatagagacgtacatgaacaacagcagtagccctttgaggagctgcaccccctgt
acagacctgcagaactcttcaagtccactgtttcgctcccctttatctggtcactctcca
cagtcctccacccttgtccgctctagtacacatctgtctctgcctgtcagatccaaagag
aggctgaggccatcgccatctcttcctctgggagtgtgtaggaaggacagagagagacct
tcctctttggtctccccgtcatcaccctccccttctaactcctcattctccatggactct
ctcttcaccccaactctggacatcttcaagagcagcgtcatatcagcaggcaaaggcgtt
gctgagaaagccagtcgtctctactcccgtttgtcctcgcagacttcattaacgcaggat
gcaaactgcgaccgtctaagtgtttcctcgctgacctcagcggaggcagaatgctcctcg
ttgacagagaactacgaatccagtctggaccccgaaggctttacttcccctcagcacagc
agcgtgtctcggctgagaataagccctgttggggtttgccacccgagcctgggcagcccc
agtagccctacaggggtgttaagacacaactccttctcaggtgctttggcacttccctct
aaaactcctcacactccaagttcctcccctgatgcaagccgcttccagccaacctctaat
tatatcattgaggtgctgatgtccagttgttctctatgtaagacatgtgactgtttggtg
tatgatgaggagatcatggcgggctggacggcaaatgattcaaacctcaacagcacttgt
cctttctgtggcacagccttcttgcctttcctaaatgctgaaattaaagatttgaaacca
caaaacaagttctctaagctaagtaatcctgttaaagaagaagacatctctgcaacgctt
agtccaaaggacaatatgtctgaggcagctcagccatctgtggcttccatacacccggtg
gagaccagtggaagtgctggcgtgtctccaccagcctcagtcccaacatctgcttctgat
ttagtgactgtgccctacctaagcccactagttctgtggaaggagcttgaaagcctgctg
gtgaatgaaggtgaccaggcaatctcttcgccaagtgttgtggaccaacaccccattgtc
ttctggaaccttgtgtggtacttcagaaggctggagctgcctagtaacctgtcagctctc
atcctggcatcccagcactgcagtagtggagaccagagtctacccagtgtttcatctgag
gacagtaggcaggtgcttgtgaggattatgtgggacaacttgaagctgcacagagacaaa
gttcagccgtgctatgtgctgtggaacacacactgtgccaactccttgatccgctctggg
ctttgtgaagaaggtcagctcttcactgtggagctgctgcagagctttgtgaggagcatt
aagaagagcgatgtctatcaacccatgactcagatcatccagctgctggggcctgagctg
ggattcaagagacagaggagcctctatagagatttgttgttcctgtctttagtggctttg
ggaaagaacaacattaatatcaatgcttttgaccgggagtacaggttggcttacgaccgc
ctcacccccagccaggtgaaactgacgcataactgtgatcggacccctggagcgggggtc
atggagtgcaggaggacctttggggagcctggtctctaa
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