Oryzias latipes (Japanese medaka): 101171835
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Entry
101171835 CDS
T02443
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X2
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101171835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101171835
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Others
GGA
101171835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
Hrs_helical
AP3B1_C
TP_0813_N
DUF6744
CEP70
UPF0242
ImmE5
PCRF
Csm1_N
Motif
Other DBs
NCBI-GeneID:
101171835
NCBI-ProteinID:
XP_004071992
UniProt:
H2MHY2
LinkDB
All DBs
Position
8:complement(19791783..19800956)
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AA seq
649 aa
AA seq
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MAAPPDTESLESCINRATNPLNRETDWSSIHAFCNQLNNDLEGPQLATRLLAHKIQSPQE
WEATQALLVLETCMKNCGKRFHSEVGKFRFLNELIKVVSPKYLGSRSPEPVKKKVLELIY
SWTLALPDEAKISDAYQMLKKQGIIKQDPELPPDKLLKLPPPRPKNAVFEDEEKSKMLSR
LLNSSHPEDLKAANKLIKEMVQEDQRRAEKVSKRVNAIQEVKESVALLTQLLQDYDSSTA
SQSNDELIQDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDSLTHVINLYKQQVKGE
IVNGNNTLNAQKPTGGGTALLDLSGLDTSPQSPPSFPEFPTPTDGLSAPSQEMGISLLDD
ELMSLGLSDGTHASNPPSQPEDSTAWDSFQSSESTEPDLPAAPSLLLSPDPPSQPHSSGS
TPGNSALDELDLLGKTLLQQSLPPEGLQVKWDKQQSKPTLRDLQNKSCTSSSVAFTPEHP
ARLPNLGATLLEKSPTHFQAPSAEVSLSNVVVPLESIKPSSLLPVTVFDGNSLRVLFHFA
RDSPPSRPDVLVVIISMLSSAPIPVTNINFQTTAPKSMAVKLQPPSGTELPAFNPILPPA
AITQILLVSNPNKEKVKLQYTLSFSLGEERHSESGSIEQFPPPGKWGQL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccgcctgacacggagagtttggagtcctgtatcaaccgagcaacaaaccct
ctgaacagagagacggactggagcagcattcatgcattctgtaaccagctcaacaatgac
ctggagggacctcagctcgccaccagactcctggcccacaagatccagtccccccaggag
tgggaggccacgcaggctcttctggttctggaaacttgtatgaaaaattgtggaaaaagg
tttcacagtgaggtgggcaagttccggtttctgaatgaactaatcaaagtagtttctcca
aagtacttgggctcccggtccccagaacccgttaagaagaaggttttggagctgatctac
agctggactctggctctgcccgatgaggccaaaatctccgatgcctatcagatgctgaag
aaacaaggaatcattaaacaggacccggagctgccaccagacaagctgcttaaacttcct
ccacctcgacccaagaatgctgtgtttgaggacgaggagaaatccaaaatgctgtcccgc
ctgctgaacagctcccaccctgaggacctgaaagccgccaacaaactcattaaggaaatg
gtgcaggaggatcagaggcgagcagagaaggtgtcgaagcgggtgaatgccatccaggag
gtgaaggagagcgtggctctgctgactcagctcctgcaggactatgacagcagcacggcc
agccagagcaatgatgaactcatccaggatctctaccagcgctgtgagaagatgagaccc
acactcttcagactggcaagcgacacagaagacaacgatgaagctttggctgagatcctg
caggccaacgacagcctgacgcatgtcatcaacctgtacaagcagcaggtgaagggggag
attgtaaacggaaacaacacgttaaatgcgcagaaaccaacagggggagggacagcactg
ctggatctgtcaggtctggacacgtctccccagtcgcctccctcctttccagagtttccc
actcctacagacggcctcagcgccccctcgcaggagatggggatcagtctccttgacgac
gagctgatgtcacttggtttaagtgacggaacgcacgcctccaaccccccctcccagcct
gaggactccacagcgtgggactccttccagtcctctgagagcacggagccagacctccca
gcagctcccagcctcctcctgagtcccgaccccccctctcagccccactcttctggttcc
acccccgggaattctgctctggacgagctggacctgctgggaaagacgctgctgcagcag
tcgttgcctcctgagggtctgcaggtcaaatgggacaagcagcagtccaaaccgactctg
agagacctccagaacaaatcctgcacgagctcctctgtagccttcactcccgagcatcct
gctcgtcttcctaacctcggagccacgctgctggaaaaatccccaactcacttccaagct
ccctctgcagaagtttcactaagtaatgtggttgttcccttagaatccattaagcccagt
agtctcttacctgtaaccgtgtttgatggaaacagtctgcgggttctcttccattttgct
cgtgactcgcctccgtctcggcctgacgtgctggtggtgatcatctccatgctgtcgtcc
gcccccatccccgtcaccaatatcaacttccagacaactgctccaaagtccatggcggta
aaactgcagcctccatcaggaactgagctcccggcgttcaaccccatcctcccccctgct
gccatcacacagatcctgctggtatcaaacccaaacaaggagaaagtgaagctgcagtac
acgctatccttcagcttaggggaggagcggcacagcgagagcggcagcatagaacagttt
cctcctccggggaagtgggggcagctatag
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