Oryzias latipes (Japanese medaka): 101171892
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Entry
101171892 CDS
T02443
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101171892
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101171892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
101171892
NCBI-ProteinID:
XP_011492790
UniProt:
H2N2D8
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All DBs
Position
2:complement(1163637..1176799)
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AA seq
645 aa
AA seq
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MSSYIPYIKEEPLTKQEAAAPAALLPTGMKRPLEEGNRGHAHYYKPRRKRQRLSLPKNAL
EQLNELRPGLQYTLLRQSGPVHAPLFVMQVEVDGRFFQGAGLTKKKAKLSAAEQALQSLL
QVCSTAQAPRRLSVPTDFTSDPSDIPSILSKASELSGPNDDLSDPGLQTPPISSSPKNSV
MLLNKMRPGLMYLVSKIREGHTLKFVVSLTVDAQTFQGSGRNKRLAKARAAQAALRALFN
LQPEREPSREPVPREGPQLHLPQVLADSVSRLILQKFSQLSYNCKCPHAKRKALAGVVMT
TDEGVEQARVICISTGTQCIDGEHLSEDGLTVNDCHAEVVARRCLVRFLYSQLELFLSED
EEHHQQSIFRRGECGRGFRLKDKVQFHLYVSASPCGDACIFSPHDTGVEGSGDEPLSRRT
RGVLRTKVQTGEGTVPVPWKEPLQTWDALRRGDRLLTMSCSDKMARWNVLGFQGSLMSYF
TEPLYFSSIIVGSLYHAAHMSRAMYGRIGPLEGLPPGFCLNRPLLSGISNPEARQPARAP
PFSENWTAGDDDVEVIDSTTGKEEMGGPSRLCKRAFYCRWMQLHSRLSSFLRVSAPPPSS
YHQAKRAAEEYCSAKHTLYRALADAGLGIWVKKPAEQDRFSLSSS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctacatcccctacatcaaagaagaaccccttacaaagcaggaagccgcagct
cctgctgctctgctcccaacggggatgaaacgacctttggaggagggcaacagaggccac
gcccactattacaaacccaggaggaagcgccagcggctctctctgcctaagaacgccctg
gagcagctgaacgaactccggccgggcctgcagtacacgctgctgaggcaaagcgggccg
gtccatgcgccgctcttcgtcatgcaggtggaggtcgacgggcggtttttccagggggcg
ggtcttaccaagaagaaggccaagctgagcgcggcggagcaggctctgcagtccctgctg
caggtctgcagcacggctcaagcacccagacgcctgtctgtccccacagactttacatct
gacccgtcagatattcccagcatcctctccaaggcctctgagttgtccggcccaaacgac
gacctttccgacccgggcctgcagacacctcctatttcctccagccccaagaattcggtc
atgctgctcaacaagatgcgccccggcctcatgtacctggtctctaaaatcagggagggc
cacaccctgaagtttgtggtgtccttgacggtcgacgcccagacgtttcagggttctggc
aggaacaaacggctggccaaagcccgggcggcgcaggctgctctgcgggcgctcttcaac
ctgcagcccgagcgggaaccgtcccgagagcccgtaccccgggaggggccgcagctccac
ctgccacaggtcctggcagacagcgtctctcgcctgattctccaaaagttcagccagctg
tcttacaactgcaagtgtccacatgctaagcggaaagccctcgcaggcgttgtcatgaca
acggatgaaggggtggagcaggcgagggtcatctgcatatcaacggggacacagtgcatc
gatggagaacacctgagcgaggacggtttgactgtcaacgactgccacgccgaggtggtc
gcccgccgctgcctggtccgcttcctgtactcccagctggagcttttcctgagtgaggat
gaggagcaccaccagcagtccatcttcagaagaggcgagtgtgggcgaggcttcaggctg
aaggacaaagttcagttccacctgtacgtcagcgcttccccttgcggggacgcctgcatt
ttctccccccacgacacgggggtggagggttcgggcgacgaacccctgagcagaaggacc
cgtggggttctgcgcaccaaagtccagactggggaagggaccgtcccagttccctggaag
gaacccctccagacttgggatgcgcttcgacggggggacaggctgctcaccatgtcctgc
agcgacaaaatggccaggtggaacgtgttggggttccagggctccctgatgagctacttc
accgagccgctgtacttctccagcatcatcgtgggcagcctgtaccatgctgcgcacatg
tccagggccatgtacggcaggatcggtccgttggagggcctgccgccaggtttctgcctc
aaccggccgctgctcagcggaataagtaacccagaggcccggcagcccgcaagagctcca
cccttcagcgagaactggactgcaggtgacgacgatgtggaggtgattgactccaccacg
gggaaagaagaaatgggtggaccgtcaagactctgcaaacgcgccttttactgccgctgg
atgcagctgcacagcaggctgtcctccttcctgcgggtctcagccccgccgcccagcagc
taccaccaggctaagcgggcggccgaggagtactgctccgccaagcacacgctctacaga
gctttggctgacgctggactgggcatctgggtcaagaagcccgcagagcaggaccggttc
tccctgagcagctcctga
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