Oryzias latipes (Japanese medaka): 101171914
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Entry
101171914 CDS
T02443
Name
(RefSeq) tetratricopeptide repeat protein 30A
KO
K19683
tetratricopeptide repeat protein 30
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101171914
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
101171914
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GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_19
TPR_12
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_Slam
ANAPC3
TPR_9
TPR_6
ARM_TT21_C
TPR_3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
101171914
NCBI-ProteinID:
XP_004071149
UniProt:
H2L3T5
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All DBs
Position
8:complement(960181..970361)
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AA seq
648 aa
AA seq
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MNVIKDGDYTATVYKLIQDCQYGEACHILNTQLHKHNKSRAALSLLGFCYYHLQDFPAAA
ECYEQLTQLHPEVEEYKLYYAQSLYKAGAYAEATKASFALDNPASHLKMVKLQACIKYCE
EDHAAAKSLLELLPQEDSDYVYNTGCLLYQEGKYEDACRSFMSAVQVLGFVPALYYNVAL
TFYSLKNYPQALKYIAEIIERGIKEHPELSVGVSTEGADVHSVGNTLLLHQSALIEAFNL
KAAIEFQLKNLKAAQEALTDMPPRSEEELDPVTLHNQALMNMDPRPSEGFEKLSFLVQQP
AFPPVCFGNLLLLYCKNEYFDLAADVLAENAHLTYKFLSPYMYEYLDASLTSQTAPEEAL
RKFEEMSGKLTEQHRKLTKQVQDARLSRDEEAQKKALQEYDLMVERYIVVLMGQAKIYWN
HENFQMVEKLFRGSLDACKDCDTWKLNVAHVLFMQNKYKEAIGFYEPIVKKHYDNILSVS
AVVLANLCVSYIMTNQNEEAEELMRKIEKEEEQISYDDPDKKVFHLCIVNLVIGTLYCAK
GNYDFGISRVIKSLEPYSKKLGTDTWFYAKRCFLSLLENMSKDMVPLRDAMVQECVQFLE
HCETYGKEVPALIEQPLEENPVHLGKNTVTYEARVLKALFYAVTGWTK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattaaagatggcgattatacggcgactgtctacaaactgatccaggactgt
cagtacggagaagcttgtcacatcctaaacacacaactgcacaaacacaacaagtccaga
gcggcgctgtctctgctggggttctgctactaccacctgcaggacttccccgccgcggca
gaatgctacgagcagctcacgcagctgcacccagaggtggaggagtacaagctctactac
gcccagtccctgtacaaagctggagcttatgctgaagccacgaaggcctctttcgctctg
gacaaccccgcctcccacctgaagatggtcaagctgcaggcctgcatcaagtactgcgag
gaggatcacgccgctgccaagtcgctgctggagctgctgccgcaggaagactctgactac
gtctacaacacgggctgcctgctctaccaggagggcaagtacgaggacgcctgccggagc
ttcatgtctgccgttcaggtgctgggattcgtccccgctctgtactacaacgtggcgctg
accttctacagcctgaagaactacccccaggcgctcaaatacatcgcagagatcatcgag
cgagggatcaaggagcatccggagctgagtgtgggagtttccacggagggggcagacgtg
cacagcgtggggaacaccctgttgctgcatcagtcggccctgatcgaggccttcaacctg
aaggctgccatcgaattccagctgaagaacctgaaagcagcgcaggaggccctgactgac
atgcccccccgatcagaggaggagcttgacccggtgaccttgcacaaccaggccctcatg
aacatggacccccggccctctgaaggcttcgagaagctctccttcctcgtccagcagccc
gcctttcctcctgtctgcttcggaaacctgctgctgctttactgcaaaaacgagtatttc
gacctggcggccgacgttctggcagaaaacgctcatctcacctacaagttcctgtctccg
tacatgtacgagtatctggacgcttcgctgaccagccagacggccccggaggaggcgtta
aggaagtttgaagagatgagcgggaaactgacggagcagcatcggaagctgacgaagcag
gtgcaggacgcccgcctgtcccgagacgaggaggcgcagaagaaagcgctgcaggagtac
gacctgatggtggagaggtacatcgtggtcctcatgggccaggccaagatctactggaac
cacgaaaacttccagatggtggagaagcttttccgcggttctctggacgcctgcaaagac
tgcgacacctggaagctgaacgtggcccacgtgctcttcatgcagaacaagtacaaggag
gccatcggcttctacgagcccatcgtcaagaagcactacgacaacatcctgagcgtcagc
gcggtggtcctggccaacctgtgcgtgtcctacatcatgaccaaccagaacgaggaggct
gaagagctgatgaggaagatcgagaaagaggaggagcagatctcctacgacgacccagac
aagaaggtgttccacctctgcatcgtcaacctggtgatcgggactctgtactgcgccaaa
gggaactacgacttcggcatctcccgagtcatcaagagcctggagccgtacagcaagaag
ctgggaaccgacacctggttctacgccaaacgctgcttcctgtccctgctggagaacatg
tccaaagacatggtgccgctgcgggacgccatggtccaggagtgcgtccagttcctggag
cactgcgagacgtacgggaaggaggtgccggccctcatcgagcagcctctggaggagaac
ccggttcacctggggaagaacaccgtcacctacgaggcccgggtgctgaaggctctgttc
tacgcggtgacgggctggaccaagtga
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