Oryzias latipes (Japanese medaka): 101172016
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Entry
101172016 CDS
T02443
Symbol
fam160b1
Name
(RefSeq) protein FAM160B1
KO
K26421
FHF complex subunit HOOK interacting protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172016 (fam160b1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101172016 (fam160b1)
Membrane trafficking [BR:
ola04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
101172016 (fam160b1)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
101172016 (fam160b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
101172016
NCBI-ProteinID:
XP_020565443
LinkDB
All DBs
Position
15:complement(29061804..29071370)
Genome browser
AA seq
771 aa
AA seq
DB search
MPGSLYETSNLERGGNNRKKKIEEFSRSSREKLVQSKNKMFSKFTSILQHAVEALAPSLP
LQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQMLDILTQEEAERESGETGPCMEY
LLHHKILETLYTLGKADCPPGMKQQVLTFYTKLLAHIRQPLLPHINVHRPVQKLIRLCGE
VLAAPTENEEIQFLCIVCAKLKQDPYLVNFFLENKSKRLENQSLAGTDGGKESALAPDTG
QSPADEHAEEAQAAAAGPASSTNNYNLVTSLLNLTKSPDGRIVVKACEGLMLLVSLPEPA
AAKCLTENTELCHLLTDRLVSFYKALPQSMDPLDIETVESVNWGLDVYNLKEDAAIFTGK
RALISFLSWLDYCDQLIKEAQKSAAVVMAKAVKERFFMAVMEPRLMQTSEVGILTSTALL
NRIIRQVTSDALLQEMVYFLLGEATEPETPAKTAQNQLRHRLIEHCDHLSDEISIMTLRL
FEHLIQKPNQHILHSLVLRSLEERNYLENKPQEEREPVENGQPHDAVDLEEDPLFADDLS
PDSRLASEWISSSPPQSPEHSKADGKTEVHKIVNSFLCLVPDEAKSSYHVEGTGYDTYLR
DAHRQFRDYCGICQRWDWRGHPKPLEKCNLDSPFFEGHFLKVLFDRMGRILDQPYDVNLQ
VTAVLSKLSLLPHPHLHEYLLDPYINLAPGCRSLFSVIVRVVGDLMLRIQRIPDFTPKLL
LVRKRLLGLEPEGITVDHGTLLEGVIVLEEFCKELAAIAFVKFHAAASSSP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtcattatatgaaacctccaatctggagcgaggcggcaacaacaggaagaag
aagatagaggaattctctaggtcttctcgggagaaacttgtacagtcgaagaacaagatg
ttttccaaatttacctccattctccagcacgcggtggaagcgctggcgccgtcgctgccc
ctgcaggaggactttgtctatcactggaaggccatcacgcactattacatcgagacttca
gacgacaaagctcccgtcacagacaccaacatcccctcccacctggaacagatgctggac
atcctgactcaggaggaagcagaacgggagtcgggggagacgggcccctgcatggagtac
ctcctgcaccacaagatcctggagacgctctacactttgggcaaggcagattgtcctcca
ggaatgaagcaacaagttctgaccttctacaccaaactgctggcccatatccgtcagccg
ctgctgcctcacatcaacgtccacagacctgtgcagaaactgatccgactgtgtggggag
gttctggcagcgcccacagagaacgaggagatccagttcctttgtatcgtctgtgccaaa
ctgaagcaggacccgtacctcgtcaacttcttcctagagaacaagtcaaagaggctggag
aaccaaagcttggcggggacggacggcgggaaggagagcgccttggctccagacacgggc
cagtctcctgcagacgagcatgcagaggaggcgcaggcggcagccgctggtccagccagc
agcactaacaactacaacctggtcacatcgctgctcaacctcaccaaaagtcccgatggc
aggatcgtggtgaaggcctgcgagggtttgatgctgctggttagtttaccagaaccggct
gctgccaagtgtttgacggaaaacacggaactctgccatctcctgaccgacaggctggtc
tccttttacaaagctctgccgcagtccatggaccccctggacattgagacagtggagtcg
gtgaactggggtctggatgtttataacctgaaggaagacgccgccatcttcacgggaaaa
agagctctcatctcatttctgtcgtggttggattactgcgatcagctgatcaaggaggct
cagaagtcagcagccgtggtgatggcgaaagctgtgaaggagcggttcttcatggccgtg
atggagccgcggctcatgcagacgtccgaggtgggcatcctgacctccaccgccctgctg
aacaggatcatacggcaggtgacgtcagacgccctgctgcaggagatggtgtacttcctg
ctgggagaggccacggaacccgaaacgccggccaagacggcgcagaatcagctccgccac
cgcctcatcgagcactgcgaccacctgtcagacgagatcagcatcatgacgctccgcctg
ttcgaacacctgatccagaagcccaaccagcacatccttcacagtctggtgctgcgcagc
ctggaggagaggaactacctggagaacaaaccccaggaggagcgcgagcctgtggagaac
ggccagcctcatgacgctgtagacctggaggaggatccgctcttcgccgatgacctctca
ccagacagccggctggcctccgagtggatcagctcctccccgcctcagagtccggagcac
tcgaaggccgacgggaagaccgaggtccacaagatcgtcaacagcttcctgtgtttggtt
cccgatgaggccaaatcttcgtatcacgtggaaggaaccggatacgacacgtacctcaga
gacgcacaccgacagttcagggactactgtgggatctgccagcggtgggactggagagga
caccccaaacccttagagaaatgtaacctggactccccatttttcgagggtcacttcctg
aaggttctctttgacagaatgggccgaattctggatcagccctacgatgtgaacttacag
gtgacggcggtgctctccaagctgtctttgttaccacacccacacctgcacgaatacctg
ctggacccctacatcaacctggcccccggctgcaggtccctgttctcggttatcgtcagg
gtggttggagacctcatgttgaggattcagcgcatccctgacttcacccccaaactgctg
ctggtgaggaagaggctcctgggcttggagccggagggcatcacggtcgaccacgggact
ctcctggagggggtgattgtcctggaggagttctgcaaggagctggccgccatcgctttt
gtcaagttccacgccgctgcctcgtcttcgccctga
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