Oryzias latipes (Japanese medaka): 101172018
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Entry
101172018 CDS
T02443
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101172018 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101172018 (emg1)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
101172018 (emg1)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
Other 90S particles
101172018 (emg1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
101172018
NCBI-ProteinID:
XP_004078017
UniProt:
A0A3P9HSQ1
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Position
16:complement(20209037..20210670)
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AA seq
237 aa
AA seq
DB search
MATSEGKKRGLEHLDEYEPKPAKYMRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNIIVKSGRDPGQVRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNSLIEINPQTRI
PRTFTRFCGLMVQLLHKLSVRAADGPQKLLRLIKNPVSDHLPPGCPRIATSFSSGEAVGP
RTLVPEGPAAVVIGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKICSAFEEVWGVL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctacctccgaaggaaagaagcgtggtctggagcatttggacgaatatgaacccaaa
cctgcgaagtatatgcgaagccttcacgaccgaatggcagaaaggagacttgttgtcatt
ttggagggggcctcgttagaaacagtgaaggtcggaaaaacgtttgagttgctaaactgc
gatcaacacaaaaatattattgtcaaaagtgggagggatccgggacaagttagaccagac
atcacacatcagtgtcttctgatgctgatggatagtccattgaacagggcaggcctactg
caggtttacatccatacagagaaaaattccttaatagagatcaatccacagacgcgcatc
ccaagaacgttcacacgcttctgtggcctgatggtccagcttctgcacaagctgagtgtc
agagcagctgatggtcctcaaaagcttctgaggctcattaagaatccagtgtctgaccac
ttgcctcctggctgccctcgcatcgccacctccttctcttcgggggaagccgtgggtccc
aggacgttggtgcccgagggaccggctgctgtggtgatcggagcatttgcacacggagcg
gtgaacgtggactacacagaaaagactgtgtctataagtaactatcccctatctgctgca
ctaacctgtgcaaaaatatgcagtgccttcgaggaagtgtggggcgtcctgtga
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