Oryzias latipes (Japanese medaka): 101172023
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Entry
101172023 CDS
T02443
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172023
Membrane trafficking [BR:
ola04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
101172023
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_EndoS
Ig_2
LRR_LRWD1
LRR_9
LRR_6
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
101172023
NCBI-ProteinID:
XP_011485008
UniProt:
A0A3P9L6A6
H2MKD1
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All DBs
Position
17:complement(22541494..22585366)
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AA seq
622 aa
AA seq
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MTGFSGPGQCALVPWLRVWRWVLATSLVAGITLTLPGNSQACPPRCECSAQLRSVSCQRR
RLVNIPEGIPTETRLLDLSRNRLRWVQAGDLSPYPRLEEVDLSENLIATLEPNAFSALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRNLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLHLRHLSIIALEDQNFRKLYS
LRGLEIDHWPYLEYISPLSFQGLDLHWLSITNTNITSVPSSSFKNMVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLVTVGPHALGGLRQIRVLNFSSNDLQTLEESSFHSVNS
LETLRVDENPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFTDSALFDHFT
CQKPRIRNRKMQKVVANEGQAVSFLCRADGEPTPAIVWISPQRRRITSKTPGRITVLPSG
TLEIRFAKLTDTGTYICIASNAGGNDTYFATLTVHGQPMDAASAFFLNRSMYSGEFFNDT
NMNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPTTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggcttttctggccctggtcagtgtgccttagtgccatggctgagggtgtggaga
tgggttctggccacctcactggtcgctgggattaccctgactctaccagggaacagccag
gcctgtcctccacggtgtgagtgctcagctcagctgaggtcagtgtcatgccagcggcgg
cggctcgtcaacatccctgagggcattcccaccgagacaaggcttctggacctcagcaga
aaccggcttcgctgggtgcaggcgggtgacctgtcaccatatccacggctggaggaggtg
gacctcagtgagaatctcatcgccaccttagagcccaacgccttctcagcccttcagaat
cttaaagtgctaaagcttaggggaaaccagctgaagttagtgcccatgggagcctttgcc
aaattaggaaacctgaccagccttgacctgagtgaaaacaagatggtgattttgctagac
tacaccttccaggatctgaggaacctgaaacacctggaagttggagacaacgatttggtt
tacatttctcacaaggctttctcaggattgctgggactggaggatctcacaatagaacgc
tgtaacctgacatccatttctggccagacgttgtcctatctccgcagtctggtcactctt
caccttcgtcacctcagcatcattgccctggaggaccagaattttcgaaagctctacagc
ctacggggtctggaaattgatcactggccatatcttgagtacatctcccctctcagtttt
cagggtctggatctccactggctgtccatcacaaacactaacatcacatccgtaccatct
tcctctttcaagaatatggtgcatctcacccacctcaatctttcttacaatcccatcacc
acattagaaccttgggccttcaaggacttgttgaggttgaaagagctcatcatggtaagc
acagggttggtgactgtcgggccccatgccctcggcggcctcaggcagatacgggtgctc
aacttctcctccaacgacctgcagacgctggaagagagctccttccactctgtcaacagt
ctggagaccctcagagtggacgagaaccccctgctgtgtgactgccgtctgttgtggatc
ctgcaaaggcgcaagaccctcaactttgacggcagggtgccggtgtgtgcagggccagtg
gaggtgcagggggtcagcctcagcgccttcactgactctgcactgttcgatcactttaca
tgccagaaacctagaatacgcaaccgtaagatgcagaaggtggttgctaatgaaggccag
gctgtgagttttttgtgtcgagctgacggagaacccacgccagcgatcgtctggatttca
ccacaacgcagacggataacatccaagactccaggtcgcatcactgttctcccgagtggg
accctggagatccgttttgccaaactcactgacacaggaacatacatttgcatcgccagt
aacgctggcggcaacgacacttactttgccactctcacagtgcacgggcagccgatggac
gccgcctctgccttctttcttaaccgctcgatgtacagcggagagtttttcaacgacaca
aatatgaacagcacacgggttttcctgaagttcaccttggacctaacaaccatcttggtc
tccacagcgatgggctgcatcaccttcctgggagttgtcctcttctgtttcctgctgttg
tttgtgtggagccgggggcggggccaacgcaggaacaacttcacagtggagtactccttc
cggaaatctgaacccacaaccgggagctcttcaggagggacacggaagtttaacatgaaa
atgatatga
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