Oryzias latipes (Japanese medaka): 101172101
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Entry
101172101 CDS
T02443
Name
(RefSeq) vinculin isoform X3
KO
K05700
vinculin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04520
Adherens junction
ola04810
Regulation of actin cytoskeleton
ola04820
Cytoskeleton in muscle cells
ola05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101172101
04520 Adherens junction
101172101
09142 Cell motility
04820 Cytoskeleton in muscle cells
101172101
04810 Regulation of actin cytoskeleton
101172101
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101172101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101172101
04147 Exosome [BR:
ola04147
]
101172101
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101172101
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101172101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
101172101
NCBI-ProteinID:
XP_011482810
UniProt:
A0A3B3H8N9
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All DBs
Position
15:23900753..23925665
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AA seq
1126 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSCSKLVQAAQMLKSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMNTIKELLPVLISAIKIFVATKSTRGAGVEEAERNRRFTFEKMSTE
INEIIRVLQLTTWDEDAWANKQDMEALKRSLALIESRMAQAKSWLKDPHGQPGDSGELAL
RVILDEAGKVGELCAGKERKDVLATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQG
LDLLYGKVDSAARRLEALISAKQAIARKLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIVGLTTRLAELRKQGKGDSPEARALAKQIGGALLTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAAGLLGPYRQ
DMIGRCDRTEGLMAALADMAGRGEAEAPHARVTAAQLQDSLKDLRQHMQEVMTQDVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAGNFETHASRLGATAEKAAAVGTANKSTVE
GIHATVKHARELTPQVTSAARILLRNPGNKAAYEHFDTMKNQWIDNVERLTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRF
RDCVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGKVREAFQPQE
PDFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMM
VAARQLHDEARKWSSKPEDEEAIEEREVDDEDEFTDGEDDYEPELLMMPSNQPVNQPILA
AAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagata
tcccacctggtcatcatgcacgaggagggggaggtggacgggaaagcaattccggatctg
acggtaccggtggctgcggtgcaggcggcagtcagcaaccttgtgcgggtgggaaaagaa
acagttcaaaccacagaagaccaagtgatgaagagagacatgccacctgcttttattaag
gtggagaactcatgttccaagctcgtccaggcggctcagatgttaaagtcagatccatac
tctgttcctgcccgggattacttgatcgatggatccagagggatcctctcgggaacatca
gacctgctccttacctttgatgaagcagaggtgcgtaaaataatccgtgtgtgtaaaggt
atcctagagtatctgacggttgctgaagtggtggagacaatggaggacctcatcacttac
accaaaaaccttggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacccaccaagagcacagacaaatgctcgtcagttccatgaacaccataaaggag
ctgctcccggtccttatctcggccataaaaatttttgtagcaaccaagagcactcgtggt
gccggtgtggaggaggcagagaggaacagaaggtttacttttgaaaagatgagcaccgaa
atcaacgagatcattcgagtcttacagctcacaacatgggatgaagacgcatgggccaat
aagcaggacatggaggctttgaagagatctctggctttgattgagtcaaggatggcacaa
gctaaaagctggctcaaagaccctcatgggcaacctggagactctggtgagctggcactg
cgagttattctagacgaagctggtaaagtgggagaactgtgtgctgggaaagagaggaaa
gacgttctggcgaccactaaggctcttggacaaatgactgatcagattgcagatctacga
gccagaggtcagggaccaacccccggttgtgtgcagcgtgcaggacagtgctcacagggc
ttagatttgttatatggcaaagtggacagtgctgcacgcagactggaggcattgatcagt
gcaaagcaggctattgccaggaagctggacgctgcacaggcatggctggctgatcccaat
gggggtccggagggggaagagaacatcagagccttgctggcagaagccaaacgtatagca
gatctatgtgaggaccccaaagagagagatgacatcctgcgctccatcagtgagattgtt
gggctcaccactaggcttgcagagctccgcaaacagggtaaaggtgacagcccagaagct
cgtgcactcgcaaagcagataggaggagccctcctgacccttcagtccaaaaccaatcgg
gctgtggccaacatgagaccagccaagcctgctgtgaccttggagggcaaaatggagcag
gccctgcgctgggtgaacaacccaggtgttgatgacagaggcgtaggtcaggcagcaatc
agaggaatggttggggagggaaggaggctggcagcaggattgttaggcccgtaccgacag
gatatgatcggacgctgcgaccgaacagaggggctgatggctgctttagcagacatggca
ggcaggggggaggctgaggcaccccatgcacgagtgacagctgcacaactgcaggattcc
ctcaaggacctgagacaacacatgcaggaggtgatgacccaggatgtatcagatgttttc
agtgacaccacgaccccaatcaagctactagctgtggctgcaactgctccacctgatgcc
cccaacagagaggaggtttttgatgagcgtgcaggaaattttgaaacccatgcaagtcgt
ttgggagcgactgcagagaaggctgctgctgtgggaacggccaataaaagtacagtagag
ggcatccatgctactgtgaaacatgccagggagcttacgccgcaggtgacctccgctgct
cggattttacttagaaatcctgggaacaaagcagcttacgagcatttcgacaccatgaag
aaccaatggattgataatgtggagagactcactggtttggtggatgaagccattgacacc
aaatctctgctagacgcttctgaggaggcaataaagaaagatattgacaagtgtagggtt
gcaatggcgaacgttcagcctcaaatgcttgttgccggggcaacaagcatagcaagacga
gctaacagggtcctgttagtggccaagagggaagttgaaaactcagaggatccgcggttc
cgagactgcgtaaagcacgcatccgacatcctctcacacacaatctcaccaatggtgatg
gacgccaaggcggtggctgggaacattcaagacaaagctctacaaaaagcatatttggac
tcatgtttgaggatcctggctgcagtaggaaaagttagagaagcttttcagcctcaggaa
ccagacttccctcctccaccccctgacctggatcagctccatgtgagtgatgagcaggct
ccacccaaaccccccttaccggaaggagaagtgcctccaccccggcctcctccaccagag
gaaaaggacgaggagtttccggagcagaaagcgggcgaggtgctcagcgagcccatgatg
gtggcggcacgtcagctgcatgacgaggcacgcaagtggtcgagcaagcctgaggatgag
gaggcaatagaggagagggaggtagatgatgaagatgagtttactgatggtgaggatgac
tatgagccagaactgctgatgatgccgtccaaccagcctgtcaatcaacccattctggca
gctgcccagtctctccaccaggaggcgcgcaagtggtccagcaagggtaacgacatcata
gcagcagccaagaggatggctctgctcatggcagaaatgtctcggctggtgcgcggcggg
agcgggaacaaaagagccctgattcaatgcgctaaggacatcgccaaggcttcggatgaa
gtcacaagactggccaaagaggtggcaaaacagtgcactgacaggcgaatcagaactaac
ctgctccaggtctgtgagcggatccctaccatcagtactcagctgaagatcctctccacc
gtcaaagccaccatgctgggccgcacaaacatcagtgaagaggagtcagagcaggccact
gaaatgctggttcacaatgcccaaaatctgatgcagtcggtgaaggagacggtcagagaa
gcagaagcagcctccatcaagatccgcacagacgcggggttcaccctgcgctgggtgcgg
aaaaccccctggtaccagtaa
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