Oryzias latipes (Japanese medaka): 101172103
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Entry
101172103 CDS
T02443
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2-like isoform X1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172103
Membrane trafficking [BR:
ola04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
101172103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
101172103
NCBI-ProteinID:
XP_023818750
LinkDB
All DBs
Position
15:28906411..28957720
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AA seq
970 aa
AA seq
DB search
MMAAAVERGGVRAAFLNPGSGGGPSPTTLPTGALAGAVVMGSGSGSMPVPMNLFATWEID
RSSPSCVPRLCSLTLKKLVVLKELDKELNSLSIAVKIQGSKRLLRSNEYVLPPSGLMETD
LELTFSLQYPHFLKRDANRLQIMLQRRKRYKNRTILGYKTLAVGVINMAEVMQHPTDGGQ
ILGLHSNVKEAPVRVAEISVFSLSSQPIDHEDGSGQAGRKTKTSDRSPDMDNYSEDDDDS
YSSEQEASDDAVHGQQPNFKQKFVALLKRFKVTDEVLDSDPVDQTQEVEEDLDLLYDSLD
NQSDSGPEVEDNESVLSTPKPKLKPFFEGMSHSSSQTEIGSIHSQKSQQRELSCPSGDFL
TVDRCKVQGSPYQEDASADATVGEPENEDNGAGPGEVNSWEVNPERITSPVGKLCKTESQ
NHMSPSKVENRLQRRPRSTSMKDRQNSKAQSDRTSSMESECSPESRLIAQVPRKSVYDQL
NQILISDERLPESIILINTTEWQGQYVAELLHEQGQPIVSTCSAADVQAAFNTIVTRIQR
FCNCNAQTPPTMKVAVAGDQSYLSTILRFFVEQLANKTPDWLSYIRFLVIPIGSHPLAKY
MASFDSRFNSIFMDTAWRELFCRTERPASDSIDVAGRVVQYLGGANVSHQFPISEAMLTY
KQKRKRSLYFDFYISPDEDSCQKFVPFVAVVKVGIVEQNLSTSMDSDDAMGGNTSILSSP
TPPSAGPYGKEIGSTPPQSPSVSTALSGAGSPCSGNELMGLQVDYWTWQGPDRKKEGEKR
DVGLKNTLKSNFRSLQVSRLPSGGELTPPPCMAMTVVTKEKNKKSDFPQQEAQGERSGLQ
EPSDRRHQQVDLHGQAPAHHAESHHRRRGVERREVLSAGGSMAHARQALPGGNLWLQQAR
VTAVHPSPSSEERGAPPRPAPPPERRFSCGNLNDWNRWLQSSAFMSSVLMLSGGVVVVFY
TLREEQVLFC
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggctgtggagagaggaggcgtgcgggccgctttcctgaacccgggcagc
ggcggtggaccctcaccgaccaccctcccgacaggagcgctagccggggctgtggtcatg
ggctccggctcgggcagcatgcctgtacccatgaacctctttgcaacctgggagattgat
cgctcatcccccagctgcgttccgaggctctgcagcctgactctgaaaaagctggtcgtc
ctgaaagagctggataaagagctgaactccctctccatagctgtcaagatacagggttcg
aagcgtcttctccgatccaacgagtacgtcctccctcccagcggactgatggagacggac
ctggagctcaccttctcactacagtacccccattttcttaagagggatgccaacagactt
cagatcatgctgcagagaaggaaacgctacaaaaaccgaaccatcctgggctacaaaacg
ttggcggtgggagttatcaacatggccgaggtgatgcaacacccaacagacggaggacag
attctgggtctccatagcaacgtgaaggaggcaccagtccgcgtggcagagatcagcgtg
ttctctctgtccagccagcccatcgaccacgaggacggcagcggacaagctggtcgaaag
accaaaacctcagaccgctccccagacatggacaattattcagaggacgatgacgacagc
tactcgtcggagcaggaggccagcgacgacgccgttcacggccagcaaccaaattttaag
caaaaatttgtggcgctgctgaagaggttcaaggtcacagatgaggtcctggattctgac
ccggtagaccagacccaggaggtggaggaggacctggatctgctttacgacagtctggat
aaccagagtgacagcgggcctgaggtggaggacaacgaaagcgtcctgagcactcccaaa
cccaaactcaagccgttttttgaaggaatgtctcactccagctctcagacagagatcggg
agcatacatagccagaaaagccagcagagagagctgtcatgtcccagtggagactttctc
actgtggacagatgtaaggtgcaaggaagcccgtatcaggaggacgccagcgcagacgca
actgtcggggagccagaaaatgaggacaatggagcaggaccaggagaggtcaacagctgg
gaagtcaatcctgagcggataaccagccccgttggcaagctctgcaagacagagtcccaa
aaccacatgtctcccagtaaagtggagaacaggctgcagagacgtccacgcagcacctcc
atgaaagaccgacaaaactcaaaggcacagagcgatcggaccagcagcatggagagcgag
tgctcaccagaatcgcggctaatagctcaggttcccaggaagtcggtgtacgaccagctg
aaccagatcctgatctcagacgaaaggctgccggagagcatcatcctcataaacaccaca
gagtggcaaggccagtacgtagctgagctgctccatgaacaaggccagcccatcgtctcc
acctgctctgctgcagacgttcaggcggccttcaacaccatcgtgacccgcatccagaga
ttctgtaactgcaacgcacagacccctcccacgatgaaggtggccgtggcgggcgaccag
agctacctcagcaccatcctgaggttctttgtggagcagctggcaaacaaaacacccgac
tggctcagctacatccgcttcctggtcatccctattggttcacaccccctggcaaagtac
atggcctcctttgacagccgcttcaacagcatctttatggacacggcctggagggagctg
ttctgcaggacggaacggcccgcctcagactccatcgacgtggcgggaagagtggttcag
tatctgggcggggccaacgtctcccaccagttccccatctcggaggccatgctcacctac
aaacagaagaggaaaagaagtttgtattttgatttttacatcagccccgacgaagactcc
tgtcagaagtttgtgccgtttgttgcggttgtgaaagttgggattgtggaacaaaatctc
tcgacttcaatggactctgatgatgccatgggtggaaacacgagcatcctgtcctccccg
acgccgccatcggccggcccgtacgggaaagagatagggagcacccccccgcagtctccg
tctgtttccacggccctgtctggagctggctctccgtgctcagggaacgagctgatgggc
ctgcaggtggactactggacctggcagggcccagacagaaagaaggagggcgagaagagg
gacgtggggctgaagaacaccctgaagagcaactttcgctcgctgcaggtcagccgcctt
cccagcgggggtgagctgactcctcccccctgcatggccatgactgtcgtcaccaaggag
aagaacaaaaaaagtgattttcctcagcaagaagcccaaggagaaagatctggactccaa
gagccaagtgatcgacggcatcagcaggttgatctgcacggccaagcaccagcacaccat
gctgagagtcaccatcgacggcgtggagtggaacgacgtgaagttctttcagctggcggc
tcaatggcccacgcacgtcaagcacttcccggtgggaatctttggttacagcaagcccgt
gtgaccgctgttcaccccagcccgagctcagaggaacggggggcgccgccccgccccgcc
ccgcccccggagcgacgcttttcctgtggaaatctgaacgactggaaccgctggttgcag
agctcagcgttcatgtcgtccgttttgatgttgtcgggtggtgttgttgttgttttttac
acactacgagaagaacaagtcctgttttgttag
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