Oryzias latipes (Japanese medaka): 101172117
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Entry
101172117 CDS
T02443
Symbol
ppp2r5c
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X3
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
ola04110
Cell cycle
ola04114
Oocyte meiosis
ola04261
Adrenergic signaling in cardiomyocytes
ola04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101172117 (ppp2r5c)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101172117 (ppp2r5c)
04114 Oocyte meiosis
101172117 (ppp2r5c)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101172117 (ppp2r5c)
09158 Development and regeneration
04382 Cornified envelope formation
101172117 (ppp2r5c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101172117 (ppp2r5c)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101172117 (ppp2r5c)
03036 Chromosome and associated proteins [BR:
ola03036
]
101172117 (ppp2r5c)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101172117 (ppp2r5c)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101172117 (ppp2r5c)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101172117 (ppp2r5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
101172117
NCBI-ProteinID:
XP_004082563
UniProt:
A0A3B3H5W3
LinkDB
All DBs
Position
22:complement(9742273..9763784)
Genome browser
AA seq
528 aa
AA seq
DB search
MPHKSKNEKEKSVRSGGKNADDQGSGKKVPPPAQLMRVKQPGSHSALKREKRLSTSTFPL
SVNRELQKLPSLRDVAPAEQEKLFIQKLRQCCVLFDFLSDPLSDLKWKEVKRAALSEMVE
YITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVY
EFFLRFLEAPDFQPNIAKKYIDQKFVMQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRA
YIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK
SLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPS
EFVKVQEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPALYRNS
KTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKAKSKEREEAWMKIENLAK
SNPQPQHEQRKERAMVRRKSELPQDIYTTKALESHRRAEEMLNTHDGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacaagagcaaaaacgagaaggagaaatcggtcagatctggaggtaaaaatgca
gatgatcagggctccggtaagaaagtgcctcccccagctcagctgatgagggtgaagcag
ccggggtcacactcggctctgaagagggaaaagaggttgagcacctccactttccccctc
agtgttaacagagagcttcagaagctgccatccctcagagatgtggcccctgcggaacaa
gagaagctcttcatccagaagctgcggcagtgctgcgttctctttgacttcctttccgac
cctttgagtgacctgaaatggaaggaagtgaagcgagcggccctgagcgaaatggttgag
tacatcacccacaacaggaatgtcatcacagaacccatctaccctgaggtcgtgcacatg
tttgctgtgaacatgttcaggacgttgcctccttcatccaaccccaccggagcagagttt
gatcctgaggaagatgagccaacgctcgaagcggcctggccccacctccagctcgtctat
gaattttttcttaggtttttagaagcgcccgatttccagccaaacatagcgaagaagtac
atcgatcagaaatttgttatgcagcttctagaactatttgacagcgaggatcctcgagag
agggacttcctgaaaaccactctccataggatctatgggaagtttctgggactgagagcg
tatatcagaaaacagatcaataacattttctatagatttatatatgagacggagcaccat
aatggaatagctgaactactagaaatacttgggagtataatcaacggatttgccttacca
ctaaaagaggagcacaagattttcctgttaaaagttttattgcctctgcacaaagtcaaa
tcactcagtgtctaccacccacagctggcctactgcgtcgtgcagtttttagaaaaagac
agtactctaacagaaccggtcgtgatggctttactaaagtactggccaaagactcacagt
cccaaggaggtgatgtttcttaatgagctggaggagatcctggacgtcatcgagccctca
gagtttgtgaaggtgcaggagcctctcttcagacagctggcaaagtgtgtgtccagtcca
cacttccaggtggcagaacgagctttgtattactggaacaacgagtacatcatgagcctc
atcagcgacaacgcagcaaagattctgcccataatgtttcccgctctgtaccgcaactca
aagacgcactggaacaagaccatccacggcctcatctacaacgctctgaagcttttcatg
gagatgaatcagaaactctttgatgattgcacacagcagtttagggcagaaaaaaacaaa
gaaaaagctaaatcaaaggaacgcgaagaagcttggatgaagatcgagaacctcgctaaa
tcaaacccacagccgcagcatgagcagcggaaagagcgggcgatggtgcggcgcaagtct
gagttgcctcaggatatttacaccacaaaagccttggagtcccaccgcagagctgaagaa
atgttaaacacccacgacgggctctag
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