KEGG   Oryzias latipes (Japanese medaka): 101172142
Entry
101172142         CDS       T02443                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03030  DNA replication
ola03082  ATP-dependent chromatin remodeling
ola03410  Base excision repair
ola03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101172142 (pole3)
   03410 Base excision repair
    101172142 (pole3)
   03420 Nucleotide excision repair
    101172142 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101172142 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ola03032]
    101172142 (pole3)
   03036 Chromosome and associated proteins [BR:ola03036]
    101172142 (pole3)
   03400 DNA repair and recombination proteins [BR:ola03400]
    101172142 (pole3)
Enzymes [BR:ola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101172142 (pole3)
DNA replication proteins [BR:ola03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101172142 (pole3)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    101172142 (pole3)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101172142 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C SpoU_methylase DUF4746 CIS_TMP Afi1 RNA_pol_3_Rpc31 Zip
Other DBs
NCBI-GeneID: 101172142
NCBI-ProteinID: XP_004066863
UniProt: A0A3P9LN52 H2L4L3
LinkDB
Position
3:complement(5686431..5688799)
AA seq 148 aa
MAEKPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFALKAK
RKTLNAADVLAAMEEMEFERFLEPLRAALEVYKKGQKGKKEVSEQKRKEKEKKADCEHEK
SKEDEEGEDEEEQRMEEETEEGEEEVEN
NT seq 447 nt   +upstreamnt  +downstreamnt
atggccgagaaaccggaggatctgaaccttcctaacgcggtcatcacgcgcatcatcaag
gaggcgcttccagatggggtgaacgtatccaaagaggcgcgcagagccatttcccaggcc
gccagcgtctttgtgctgtatgcaacctcctgtgccaataactttgcactgaaggccaaa
cggaagactttaaatgctgcagatgtgctggcagcgatggaggagatggagttcgaacgc
ttcctggagcctctcagagcggctctagaagtctacaagaaaggtcagaagggaaagaag
gaagtgtctgagcagaaacgcaaagaaaaagagaagaaggcagactgtgagcatgaaaag
agcaaggaagatgaggagggagaggatgaggaagaacaacgcatggaggaggagaccgag
gagggggaagaggaggtggagaactga

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