Oryzias latipes (Japanese medaka): 101172144
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Entry
101172144 CDS
T02443
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X5
KO
K24155
rabconnectin-3a
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101172144 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172144 (dmxl2)
Membrane trafficking [BR:
ola04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101172144 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101172144 (dmxl2)
RAVE complex
101172144 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
TPR_GEMI5
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101172144
NCBI-ProteinID:
XP_011486738
LinkDB
All DBs
Position
3:13431293..13474794
Genome browser
AA seq
3093 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGCVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSQQLGRIAASYGNTVCIFEPLSTNPNKLHKINYQWQKTGQFFLDAITYNLAWDPQ
GNRILAATERLQLWAPPSRDALIEEEDGQVNEDQPHPVLSDWNCVWQCKTAASVHIAKWS
PDGEYFATAGKDDCLLKVWYPTTGWRSAVVVQDPSDKKPSPVQFSFVYLAHPRSVTGMSW
RKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISDNSQSFTSSLPGLAGN
KDKIQHALESIHHLKQLRRGRRRSSALVAHSDLLPSQLGTQDSHTHRHIAHHASALCHFH
ISASINPNTDIPSMLADSGLFNPEDSTGGGGFMVHWLNNKDLSFTSSMDLFMMQLRKFSE
QQLDQTTEEPVEPGGSPLKFDFDLDEMSDKASSEHGEEAESGEQGSNKASSPGSSSSMPL
PSMLLERKIETLTTEWNKSPDMLFTIHPIDGSFLVWHVKYLDEFNQGIFRQVQVSFSSRI
PVAFPAGDANSLSKNILMYACTLTESESVGTGEQGRMVQRVSRSASVSACLGSPAVSPSP
KLRPGISPAVMMVSKHVDGSLNQWAVTFAERSGFSNVLTVSHKFRYCGHRFHLNDQACHT
VLPLLLTTSHHNALLTPPSAPSSLEGEQPPTFPLPKGLPRKQLRNAATRTFHDPNAIYSE
LILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFVA
SDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCS
SNTQLLHVFQEDFILGYKPQKEPEALMPPFPTGEDYQPAPFSEKFFLVLIEKDLNRNSVL
QMWHLHLKSVQACVDEPSPDYSFQSQLMVPNQAMNAESSPETSPVRPLPRSTSTANLQSA
SKLILSSKLVYSKRLDLPHGVEVTRATPSGGHLSSSSIYPVCLAPYLIVTTCSDSRVRFW
RCAVEGDEECDEDKRDNRVYAWEPWVLMNEEEDNNNSAVCVSGRPVAVSCSYIGRLAVAF
KQPRSGQPHGSLEDFSMHVSIYECESTGGSEWVLEQTLHLDDFVRPSSTLDSRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTS
SKEGMAIITLPLGGSIKQGIRSRWVLLRSVDVLSSVDGTPSLPVSLSWVRDGILVIGMDC
EMHVYAQWHQDKKPGEGEEGNASSVDIAGGQTIGSSSVSEGRARSKSVFEGSTGVDEALR
APAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR
DVEAGEGGGRRHLSRTISVTGSTAKDTIVSGRDGGRDYTEINSIPPLPLYSLMLADLDTS
YKTEEPSKGSKVADGDAVQKSAEDQYADLFQVPAVTTDDFVNFATDKPEKKSRVINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTEQQYTSAEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEEMLNMIPAMQ
RGDPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRNNDPLDAALFYLAMKKKAVLWG
LFRSQHDEKMTQFFKNNFNEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAGSLKDAIEVL
IEKMEDLQFAMIVARLYEADFESSSTSQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTQALDTLLERIPKEDDENPNVMVKACNPVVFSFYNYLRTHPLIIRRHFANPEG
PTSTVGLTAEKSGADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPRVSKKCSSSAL
SKASSKVNVNANQPLENGTQGGMDWSTSAASSHAWGANESSGGLDWSQLAVKVKEDELKL
DWEEDKDADDIEDDDGLTMKKAEPENKAGEGPKLQKEDSQAESEVDVIAEQLKFRACLKI
LMTELRTLATGFEVDGGKLRFQLYNWLEKEIAAMHKICNYKVEGKEEGAEVDRWRDRTAS
VDISDEAFESTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAK
GGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLSN
HIHDILHTSTMMLVPPHPNFMDDRVNTVHTLAASLSACVYQALCDSHSYSNNQTEANQFT
GMVYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEDQPRLNVLLCE
AVVAVYVSLLVHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPEPPPATAV
PNKESSEAKAEQPSETRCEAEPKAEVTIQDNGAAPTQAPAEDVDRHRRRFNMRMLVPGRP
VKEAPATPSPVPPERPTYREKFIPPELSMWDYFVAKPFLPLSDSSALYDSDESGAEDDED
DDDAFLSDTQITEHSDPNSYSWALIRLVMVKLAHHNVKNFIPLTGVDLTDLPVSSPLCNA
VLKTLENWEQLLLERISKFDGPPPNYINTYPTDLSAGAGPAILRHKAMLEPDNTPFKTKN
HQSFPVRRLWYFLVKQEVLQETFIRYIFTKKRKQSESLENHVDRVNPNCIAGASNPYKVE
ADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVLASTHDVQEVDVSNLVAVQPYTWIGE
DFDKESCSSDDIDHRSSHTNIAQTSSVSFAPPPMPVSASMPWLGSGQTSMGASVIMKRNL
NNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGV
ADGEGFLSLWQVNQTSSNPKPYLSWQCHTKACCDFAFITSSSLIATAGQSNDNRNVCLWD
TLISPSNTIVHAFPCHENGATVLQYAPKQQLLITGGRKGFVCVFDIRQRQLLHTFQAHDS
AIKALALDAYEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQVETC
PGNRIFTCGADGTLKMRVLPDSYNLPGSLVDIL
NT seq
9282 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaagtgctgacgggagctgtaaaccctggagattgctgctactcggtg
ggatgcgtaaacgatattcctttcactgcttacggctcaggttgtgatgttgtgatcttg
gctagcgactttgactgtgttcagatcattcctggagctcagaatggaaacatacaggtt
ggctgtgtggagtgctctcaacagcttggcaggattgctgcatcctacggaaacacagtc
tgcatttttgaacctctttctaccaacccaaataaactccacaagattaactatcagtgg
caaaagacaggacagttcttccttgatgccatcacctacaacttggcctgggatccacaa
gggaaccgtatcttggcagcaacagagcgactccagctgtgggctccaccatcgagagat
gccctcatagaggaggaggatgggcaggtgaatgaggaccagccccacccagtccttagt
gactggaactgtgtctggcagtgcaagactgcggcgtctgttcacatcgccaagtggtct
cctgatggggagtactttgcaacagctgggaaggatgactgcttactcaaggtttggtat
cccaccactggctggcggtccgcagtggttgtccaggacccgtctgataaaaagccttct
ccagttcaattttcctttgtttatctggcccatcctcggtcggttaccggcatgtcctgg
aggaagaccagcaaatacatgcccaagggatctgtctgcaatgtgctgctgacgtcctgt
gaagatggggtgtgtagattgtggtcagaaaccctcctaccagaagacagtcttcttggt
gggcagatctctgataacagtcagtccttcacctccagcctgccaggtctggcaggcaat
aaagacaagatccagcatgctttggagtcaattcaccaccttaagcagctgcgccgaggc
cgtcgccgatcttccgctctggtagctcacagtgacctccttccatctcagcttggcaca
caggactcccacacccaccgccacatagcacatcatgccagtgctctctgtcactttcat
atctctgctagtattaaccccaacacagacatcccatcaatgctagctgactctggtttg
ttcaatcctgaagatagcacaggtggtggaggtttcatggttcactggctcaacaataaa
gacctcagtttcacttcctctatggacctctttatgatgcagcttcgaaagttctctgaa
cagcagttggatcaaacaactgaggaacctgtggaacctgggggatccccattaaagttt
gactttgacttggacgaaatgtctgacaaagcttcatcggaacacggagaagaggcagaa
tcgggggagcaaggaagtaacaaagcatcatcccctgggtccagctccagcatgcctttg
ccatcgatgctgcttgaaaggaagattgagactctgaccacagaatggaacaaaagccct
gacatgctgtttaccatccatcccattgatgggtcctttcttgtttggcacgtgaagtac
ttggatgagttcaaccagggaatcttcagacaggttcaggtgtctttctcctcgcgcatt
ccagtagctttccctgcaggagatgccaactctttgagtaaaaacatcctgatgtacgcc
tgcactttgactgaaagtgagagcgtcggcacaggcgagcagggaagaatggtccagcgt
gtctcacgctccgcctcagtctctgcctgcctggggtcacctgccgtctccccctcacct
aaactccgccctggcattagccccgccgtcatgatggtctccaagcatgttgatggttct
ctcaaccagtgggcggtaacgtttgcggagcgttctggcttctccaacgtactgactgtg
tctcacaagtttcgctattgtggccatcgtttccacctgaatgaccaagcatgtcacaca
gtgctgcctttgctgctgacgacctctcaccacaatgccctgctcactccgccctcagct
cccagcagcctcgaaggggagcagcctccaacctttcccctaccaaagggacttcccagg
aagcaactccgtaacgctgctacaaggacctttcatgaccccaacgccatttatagtgaa
ttgattttgtggagggtagaccacatcggacccctgtcgtgcacggggggtgtttctgaa
ctggcccgtataaactccctacacacctctgcgttcagcaatgtggcctggcttcctaca
ctggttcccagttctgtccttggaacctactgtaacagcgccagcgcctgttttgtggca
tcagatgggaaaaacctgcgtctctatcaagctgtagtggatgccagaaaactactggat
gagctttctgaccctgaaacatctaaactggtgggtgaagtgtttaacatagtcagccag
cagtccactgccaggcctggttgtatcatagagctggatgttatcacaaaccagtgcagc
tcaaacactcagctgctgcatgttttccaagaggattttattttgggctacaaaccccag
aaagagccagaagctttaatgccaccttttccaacaggggaagattaccaacctgcccca
ttttctgagaaattttttctggtgctgatagagaaggatctcaacaggaactctgtcctg
caaatgtggcacctgcacctcaagtctgtacaagcctgtgttgacgagcccagcccagat
tatagcttccagagtcaacttatggttcccaaccaagcgatgaatgctgagtcgtctcca
gagacctccccagtcagacccctgcctcgctcaacttccacagcaaacctgcaatcagcc
agcaaactcatcctcagctccaagctggtgtatagcaagcggctggacctgccacatgga
gtggaggttaccagggccaccccctcaggaggtcacctgagttcttcctctatctaccct
gtgtgcctggctccatacctgattgtcacaacttgctctgattcccgtgtgcgtttctgg
cgctgcgcggtggagggagatgaagagtgtgatgaagacaaacgggacaaccgggtgtat
gcctgggaaccttgggtcctcatgaatgaggaggaggacaacaacaacagtgcggtgtgt
gtgtcgggacggcctgtagctgtgtcctgctcgtacatcggcagactggcagtggctttc
aaacagcctcggtcaggacagccgcatggatctctagaggacttctctatgcacgtgtct
atctatgagtgtgagtccacgggtggctctgagtgggtcttagagcaaactctacacctt
gatgactttgtcagaccctcatcaactctggattcaagagtcagtgtggattcaaacctc
tttgtctacagcaggtctgacttgtacatgagcagagaccacagctcacccaacatcaag
cactttgtgcacttggactggctgtcaaaggaggatggatctcacatcctcacagtcgga
gtcggctccaacattctcatgtatggccgcatctctggcgtggtcaacgagcaaactagc
agcaaggagggcatggcaatcattacccttcctctagggggcagtattaaacagggtatc
cgctctcgctgggtcctgcttcgatctgtggacgtcctgtcgtcggtggatggaacacct
tcactaccggtttccctgtcttgggtgagggatggcatcttggtgattggtatggactgt
gagatgcacgtttatgcccagtggcaccaggataagaagcctggtgagggagaggagggc
aatgcatcatctgtagacattgctggaggtcaaaccattggctcttcctcagtctctgaa
ggaagagccaggtctaaaagtgtttttgagggaagtaccggagtggatgaggcccttcgt
gccccagctggcctacaggaaggaggcctgtttgaagcagcccactccttgtcacctact
ctcccacagtaccatccaacccagctgctggagctcatggacctgggcaaagttcgtcgt
gccaaggccatcctcgcacacctggtaaagtgtattgctggagaggttgctgtggtgagg
gatgtggaggcaggggaaggcggaggcaggaggcatctgtctcgcaccatcagtgtgact
ggcagcacagcaaaagacaccattgtgagtggccgtgatggaggcagggactacacagaa
atcaactctatccctcctctgccgctttactcgctcatgttggctgatctggatacatcg
tacaagacagaggagccttccaaaggctcgaaggtggctgatggggatgctgttcagaag
tctgcagaggatcaatatgctgaccttttccaggtcccggcagtcaccacggatgacttt
gtcaattttgccactgataaaccagagaaaaagtctcgtgtgatcaacctctctcaatac
ggacccacctactttggaccagaacacgctcaggtgttgtccagtcacctcatgcattcc
agccttccagggctgaccagactggagcaaatgtttcttgtggccttggcagataccgtg
gcaaccaccagcgctgaggtcacgagctccactgagcagcagtatacaagtgccgaggct
cttgatgagtgtggactcagatacctccttgccatgcgtcttcatacatgcttacttacc
tctctgccgccgctctaccgtatgcagctgctccaccaggggctttcaacatgccacttt
gcgtgggccttccactcagaggcagaggaggagatgctgaacatgattcctgccatgcag
aggggcgacccgcagtggtctgagctcagagccgtcggagtgggatggtggatacgcaac
atcaataccttgcgcaaaatggtggagaagttgggtaaagctgcattccagaggaacaac
gaccctttagatgctgctttgttctacttggccatgaagaagaaagctgtcctgtgggga
ctcttcaggtcacagcacgatgagaagatgactcagttcttcaagaacaacttcaatgag
gaccgctggcgaaaggcagctctgaaaaatgccttctccctgctgggaaagcagcgcttt
gagcaggcggctgcctttttccttctcgctgggtccctgaaagatgccatagaggtgttg
attgaaaagatggaggatctccagtttgccatgatagtagccaggctgtatgaggctgac
tttgagagttcgtccacctcccaaggcctcctctatgagaaggttctgggctgcaacagg
gatgggagtggctaccactgctccaggctgcaccctgatccattcctccgcagcatcgcc
tactggatcatgaaagattacacccaagccttggatactctgctggagcgcatccccaaa
gaggatgatgagaaccccaatgtgatggtgaaagcttgcaaccccgtggtgtttagtttt
tataactacttgaggacacaccccttgatcattcgccgccattttgccaatccggagggc
ccaacatcaactgtgggtttgaccgctgagaagagcggagccgatgagatcaacctcata
gagcgcaaactgttcttcaccactgccaacgcacactttaaggtggggtgtccggtccta
gctctagaagtcctctccaaaattcccagggttagcaagaaatgcagctcttccgccctc
agcaaagcatcatccaaggtcaacgtaaatgcaaaccaaccgttggagaacggcacccag
ggaggaatggactggagcacctcagcagcatcctctcatgcttggggagcaaatgagagc
tctggcgggttggactggagccagcttgcagtcaaagtgaaagaagatgagctgaagctg
gactgggaagaagataaggatgcagacgatatagaggacgatgacggtcttaccatgaag
aaagcagagcctgagaacaaagcaggggagggccccaaactgcaaaaagaagactcccag
gctgagtcagaggtggacgtgatagcagagcagctgaagttccgtgcctgtctaaagatc
ctcatgacagagctgcgcaccctggccaccggctttgaggtggatggagggaagctacgt
tttcaactctacaactggctggagaaagagatagcagctatgcataagatctgcaactac
aaggtggaggggaaggaggaaggcgccgaggttgatcgctggagagatcgtacagcatct
gtggacatatccgatgaagcttttgaaagtacagaagcaggcgcttacgaacgccaccag
atggagcgtcggcgtcttcaagccaagcagcagcactctgagaggcgcaaggcatggctg
aggaaaaaccaggccctgctgagggtgtttctgtcctactgcagccttcacggagccaaa
ggagggggtgtcacctctgtccgcatggagctgctgttccttctgcaggagagtcagcag
gagaccacagtaaagcagttgcagtctccactgcctctgcccacaacactgcctctgcta
tcagcttgcatcgcccccaccaagaccgtcatagccaatcctgttttacatctcagcaac
cacattcatgacatcctccacacctccaccatgatgctggtccctccacatcctaacttc
atggatgatcgggttaatactgtgcacacactagcagcctccctgtctgcctgcgtctat
caagccctgtgtgacagccacagttacagcaacaatcagacagaagccaaccagttcaca
gggatggtttaccagggtctgttactcagtgagcgcaaacggctgcgcacagaaagcatt
gaagaacatgtaacccccaactctgctcctgcacagtggccaggcgtgtcctccctgatt
tctctgctgacgtcagcacgggaggaggaccagcccaggctgaacgtgctcctgtgcgag
gcggtcgtggcagtgtacgtctcgctgctcgtccacggcctgggcacccacaacagcaat
gaactcttccgactggcagctcatcctctcaataaccgcatgtgggccgcggtcttcgga
ggaggggcaaaggtcataattaaaccaaagagaccggagccccctccagcaacagctgtg
cccaacaaggagagttcagaggcgaaggctgagcaaccctctgagactagatgtgaagca
gagcctaaagcagaggtaaccatccaggataatggtgcagcccccactcaggcgccagca
gaggatgtagatcgccacaggcgcagattcaacatgaggatgctggttccaggacgcccc
gtaaaggaggcgccagctactccgtctcccgtgccccctgagagacccacctacagagag
aagttcattcctccagagctcagcatgtgggactactttgtagctaaacctttcctaccg
ctgtcagacagcagcgctctgtatgactcagacgaaagcggcgctgaggatgatgaagac
gatgatgatgcattcctctctgacacgcagataacagagcactctgatcccaactcctac
agctgggctttgatccgtctggttatggtgaaactggctcatcacaatgtgaagaatttc
atccctctcactggcgttgacctgacagatcttccagtatcttcccctctctgcaatgct
gtgttgaagactttagaaaactgggagcagcttctgctagaaagaataagcaagtttgac
gggccccctcccaactacatcaacacctaccccaccgacctgagcgccggagccggcccc
gccatcctgcgccacaaagccatgctggaacccgacaacacacccttcaaaacaaagaac
catcagtcctttcccgttcgacgtctgtggtatttcctggtcaaacaggaagtccttcag
gaaactttcatacgctacatctttaccaagaaaaggaagcaaagtgagtctttagagaac
catgtggaccgtgtaaacccaaactgcatagccggagctagcaatccctataaggtggag
gcggatcttggttaccctggaggaaaagctaaaataattcacaaggaatctgacataatt
atggcatttgcaatcaacaaggctaactccaatgagatagtgctggcctccacccatgat
gttcaggaggtggacgtgtctaaccttgtggcagtccagccgtacacctggataggggag
gactttgataaggagtcctgcagctcggacgacatagaccatcgttcctctcacaccaac
atcgcccagacaagctccgtctcctttgctccccccccaatgccagtttctgcttccatg
ccgtggctcggcagtggtcagaccagcatgggggccagtgtgattatgaagcggaatctg
aataatgtgaagagaatgacatcccatcccatctatcagtattacatgacgggtgctcag
gatggcagtgtgagaatgttcgaatggaacagacctcagcagctcatttgcttcagacaa
gccggcaacgccagggtcactcggctttatttcaactctcaaggcaataagtgtggagtt
gctgatggggagggattccttagtctgtggcaggtcaaccagacatcctccaaccccaaa
ccctacttgagctggcagtgtcacactaaggcctgctgtgactttgccttcatcacatcg
tccagtctgatcgccacagctggacagtccaatgataacagaaacgtctgcttgtgggat
actctgatttcaccgagcaataccatagtccatgcattcccctgccatgaaaatggagcc
actgtgcttcagtatgctcccaaacagcagctgctgattacaggaggcaggaagggcttt
gtgtgcgtgtttgacattcgccagaggcagctgttgcacactttccaggcccatgactcg
gctattaaagccctcgcactggatgcctacgaggacttcttcgtcaccggctctgcagag
ggcaacatgaaggtctggaagttggccggtcatgggctcatgcactcttttagcaccgag
cacgccaagcaatcgatcttccgcaacatcggtgcaggagtgatgcaggtggagacgtgt
cctggaaaccgcatcttcacctgtggagccgatggaaccctgaagatgagggtcctcccc
gacagctacaacctccccggcagcttggtcgacatcctgtaa
DBGET
integrated database retrieval system
