Oryzias latipes (Japanese medaka): 101172149
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Entry
101172149 CDS
T02443
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
ola03410
Base excision repair
ola03420
Nucleotide excision repair
ola03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101172149 (rfc4)
03410 Base excision repair
101172149 (rfc4)
03420 Nucleotide excision repair
101172149 (rfc4)
03430 Mismatch repair
101172149 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101172149 (rfc4)
03036 Chromosome and associated proteins [BR:
ola03036
]
101172149 (rfc4)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101172149 (rfc4)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101172149 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
101172149 (rfc4)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101172149 (rfc4)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101172149 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
101172149 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_30
AAA_16
AAA_22
AAA_11
Mg_chelatase
AAA_24
DUF815
AAA_19
SLFN-g3_helicase
RuvB_N
AAA_14
AAA_28
Gp44_lid
AAA_5
KH_DUF2096_C
ResIII
AAA_7
DNAX_ATPase_lid
AAA_3
Motif
Other DBs
NCBI-GeneID:
101172149
NCBI-ProteinID:
XP_004067597
UniProt:
A0A3B3H3F4
LinkDB
All DBs
Position
4:complement(1759098..1768452)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGAGVGKPLKDKGPAGPSADKKPKTVPWVEKYRPKCVDEVAFQEEVVAVLKKSLE
GADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKTFA
QLTVAGTRPDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRII
EPLTSRCSKFRFKPLANRIQEERLLEICEKENLKYTRESIEALVQVSEGDLRKAITFLQC
AARLNMDKEITDRAIVEIAGVVPSKMIEGLLQTCFKGTFERLEVTVRNLVNDGYAATQIL
SQLHESIIESDLKDKDKSIITEKMAVVSKCLSDGADEYLQMLSLCSVIMQRAAQS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctcaaaggagcgggtgtcggtaaacctctgaaggataaagggccggct
gggcccagcgcagacaagaaaccaaagactgttccttgggttgagaaatacagaccaaaa
tgcgtggatgaggtggccttccaggaggaggtggtggcggtgctgaagaagtccctggaa
ggagcagatcttccaaacctgctgttctacggcccgcctggaacaggaaagacttctacc
atcttagcagctgctagagaactttatgggccggagctgtaccggcagagggtgctggag
ctgaacgcctcggatgagcgaggcatccaggtcgtcagagagaaagtgaaaacctttgct
cagcttaccgtggcaggaacccgtccagatggaaagctgtgtcctccctttaagatcatc
attctggacgaggcggactccatgacggcgccggctcaggcggctctaaggcggaccatg
gagaaggagtcccgtaccacccgtttctgtctcatctgtaactacatcagcaggattatt
gagcccctaacatccagatgctccaagtttcgatttaaacctttggccaatcgaatccaa
gaagagcgactgctggagatctgtgagaaggagaacctcaaatacaccagagagagtatt
gaggcactggtgcaggtgtcagagggggacctgcggaaagccatcacattcctgcagtgt
gctgctcgactcaacatggacaaggagatcactgacagagctattgttgaaatagccggg
gtggttccttccaaaatgatagagggcttgctgcagacatgttttaaggggacatttgag
agactggaggtaacagtcaggaacctggtgaatgacggttatgcagccacacagatcctc
agtcagctgcatgagtccatcatagagagtgacctgaaggacaaggacaagtccatcatt
acagagaagatggcggttgtgagtaagtgcctctcggacggagcagatgaatacctgcag
atgttgagtctgtgttctgtcatcatgcagcgggccgcccaaagctga
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integrated database retrieval system