Oryzias latipes (Japanese medaka): 101172151
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Entry
101172151 CDS
T02443
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101172151 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101172151 (tpr)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101172151 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
HMMR_N
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
101172151
NCBI-ProteinID:
XP_023810075
LinkDB
All DBs
Position
4:complement(15031093..15052876)
Genome browser
AA seq
2353 aa
AA seq
DB search
MAALLLQELEASEISKLPKQIQNKIEKIISDLQYEVDSLKAQQEQFRVDSEQQFFEKVKE
LARCQEEFLTQTQEHHKLRVELSQLDQELQNAREKNREHESAQDKLSSERTLLSKAKENL
ESEKRELVRTLERRSLEVEHLNDDLKQLNEKLVEANTSKLALQMKMDELETAEVNIKYKE
KRMEQEKELLHDQTSWLKEELKAKTEEVLSLSRQKGNEILELKCSLENKQDELNKLQDQV
MTLKCSNENLQKQNDDTINKLKETKEQQASMEEKFRNELNANIKLSNLYKGAAADSEAKS
VELSRAVEELHKLLKDAGEANKALEEKVQEINIATDKTVNELKEKIQSLEKELDNANELL
SNSKLRGAGNRSVLTEEQLITMSPTAAAVSKIRPNMKLTELYTAYVETNEQLQLERLENK
RINKYLDNIVQEVEAKAPILKRQREEHERMQKSVASLSTKLEQAYKEVHRLQNEADESNK
RSSILERDNQRFELQVADMAQQVRVLLVELEEARGNHVVHEEEVMSGDISSTSEVISQHL
VTFRSVEELQKQNQRLLVALRELSDSQEREEFEATSDKRGELEQRFDKAQSELESLKEQR
NQQIKMTESIVRQRDMYRMLLAQSTGVSFTQGVPAEEFSLTSTPRRSHAATPTSGTSAAL
VSMAAESAEALEAKAALRQLQEVFTTYKKERLESDKALTEQNEKLQEQLSELRSQNAKTS
TQLEFASKRYEMLQDNVEGYRKEIAALREKGQKMAADTQKLEQTVNTLQEDLKTAKEKLA
MAQAHAENLRKEKDMLKLLESRLTQEKETILNQQQSQNLLLTNLQSIQASLERSETDVRQ
RLNSQIEKQEREITQLQKRLEQEVEQRHLLSRNQEIQVVDLKRQLETQVALHQRTKEQIN
VLEMELSTFRMQQGNIEGRHTLGSPSTPIRVASLQGLDQDREDLQARLKLAETRAEELAE
SLRAATSSMEQYRAMAQSLEESLNKEKQVTEQARSSIEARMKEAEEQHRALEERLQGMEK
EKQDLEDQKRRVVAGLEEEINSLKKSLSSVQEDQQTVLQRLVLSEAQQQQALIDGQEQVK
LAAEAQDKYEREMMLHAADVEALQAAKAQASQAVELRHQLEEKLQRVSAELLEARVSWEE
QEKILKEAVSKVESRNEELQSQNTLLHEQLQTMSTKLADSVQRTANESALNISLTEEGKS
QDQLLEVLRFVRREKELAESRFEVAQGESLRYRLRMEHLERELKEVQDSLSAARERMQVT
AKTLAQHDELMKKTETMSILMETNKMLREEKDKMEQELQQTQAKVEKLEKAIMPLQQSNS
ELSEKSGMLQAEKMILEEEIKRWKARTQHLVSQQKDLDPEEYKRLHSEREAHVKRIQQLS
EESARLKMELTRTNNLTTGLQGQIQNLRENLSKITEERNMLKKEVETKNQELLEKARTIT
QVKKIGRRYKTQYDELKVTHDKLVSDTAAGPSQDEEARQASAQELQSLRDSLGQAQNRSK
ELEGQLENISKVVTERENEVRSAQEQSTRLQADLTRLRQELQEKTSQEDTLRQQMAEKDE
KTRKALMSAKQKISLLSNTKEQLQKENEELKTQREELEVRVSALKSQYDGRLSRLERELR
DLRGQQERQEQRDEPAEAGPSKTQEQQRSTEQRQISLKTTPTSDRGSATTSEPPTANIKP
TPVAPTASKQPVNPGNKPTPRASIKPMITPAPVPTPTPTATVMPTTQVETQEVMQPTEGP
PVEHVTVYGSASGSVRSSSPNVQTTLASPMLTVQQPQTQATAFVQPTQQQSVTHTEPSSQ
EPVMIDATPSSQVEWPSTSSVFGTVSATSGSSAMSKRPREEEESSTMVTETEATQEDTSR
APVPKKLRIIQRVGPEEELLTEESAEADGVVPTDSQDGEASQTEEFPLMEEGDEGAASQS
VPSEQEVAGTQGETPSQLQQEVIVIITDTESDEDQEEGEEEEEEQEYEEEEEEDDEEEED
EDDEADDGGMGEEEEESNDGSGDGNEAYEGDDPEGADVTDAGTETEESLGASDSTQRPAD
SQTPSFEGSTVEAFSTEQPISSSGARMPPSPRRPVQQLSPRLNVHPAQSSELGPPVQQRV
PVRRQSVGRLTPGMQSCVPLHNEEDDRMVPCTPTLPHRPEGLDQAVHSPQVTGVSRLFGS
PEDVPQTSSSSHSDLGQLAAQGGFGMYENPLLPSHEEESGGRSVPTTPLQVCGSEAAPSD
TTEHASQSVPTVSTSTPGLVAAVTASTGDEGESSLLESDTDRSSSEVLVDPVVSQEDMEV
PSQPADKASLPSTSQEPTSSSADTSSAPPRPSRPGSGSRFGPLQRWTDNRSGRGKRGGQA
FPSRGVSGRRFAR
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactattgctgcaggagttggaggcgtccgagatttctaaactaccaaaacaa
attcaaaacaaaattgagaaaattatttctgatctacaatatgaagttgattccctaaaa
gcacagcaggaacaatttcgagtagacagcgaacaacagttttttgaaaaagttaaagaa
ctcgcccgatgtcaggaagagtttttgacccagactcaagaacatcataaattaagagta
gaactttctcaactggaccaggagctccaaaatgcacgtgaaaagaacagggaacatgaa
tctgcacaggataagttgtcctctgaacggactttgctgtcgaaagccaaagagaatctg
gagtcagaaaagcgggaacttgtgagaactttggagaggagatccttggaggttgaacat
ttgaatgatgatttaaagcaactaaatgaaaagttggtggaggccaacacttccaaatta
gctctgcagatgaaaatggatgaacttgaaacagcagaagttaacataaagtacaaagaa
aagcgaatggaacaagagaaggaacttctgcatgaccaaacatcttggctgaaagaggag
ttgaaagccaaaacggaggaagttctgtctctgtcacggcaaaagggaaacgaaattcta
gagctgaagtgttccctggaaaataagcaagatgagctgaataaactccaggatcaagta
atgactttgaagtgttcaaatgagaatctccagaaacaaaatgacgacacgatcaacaaa
ctgaaagaaacaaaagagcaacaagccagcatggaggaaaagttcaggaatgagctgaat
gccaacattaagctttcaaatttgtataagggagcggcagcagattctgaggctaaaagt
gtggagctaagtcgagcagtggaggagctccataagctcctgaaagatgctggagaagct
aataaagctctggaggagaaagtgcaggaaataaacattgccacagacaaaacggtgaat
gagctaaaggaaaagattcagagccttgagaaggagcttgacaatgccaatgaacttctg
tcaaactctaaacttagaggcgctggtaacagatctgtgctaacagaggagcaactgata
actatgtccccaacagccgctgccgtgtctaaaataagaccaaacatgaagttgactgag
ttgtacacagcttacgttgagaccaacgagcagttgcagttggaacgcctggagaataaa
cgaatcaataagtacctggataatattgtgcaggaggtagaggcaaaagctcccattctc
aaaagacaaagggaagagcatgagcgcatgcaaaagtcagtggccagtctttctaccaag
ctagaacaagcctacaaggaggtgcaccgtttgcagaatgaggcagatgaatcaaacaag
cggtcatccatcttagaaagggacaaccagaggtttgaactccaggtggctgacatggca
cagcaggttcgggtgttgctggtggagctggaagaggcccgcggaaaccatgtggttcac
gaggaagaggtgatgtctggtgacataagcagcacctcagaggtcatcagccaacatttg
gtgacgttcagaagtgtagaagagcttcagaagcaaaatcagcgacttctggtggcccta
agggagctcagtgattcccaagagagagaagagtttgaagcaaccagtgataagcgtgga
gagctggagcagaggtttgacaaagctcagtcagagttggagtctttgaaggagcaacgc
aaccagcagataaaaatgactgagtccattgtgaggcagcgggacatgtaccggatgctg
ctagctcaatcaactggagtcagcttcacccaaggtgtacccgctgaggagttctctctg
acctctaccccacgacggtcacacgcagccacacccaccagcgggacttccgccgctctt
gtttccatggcagcagagtctgctgaagcactagaggccaaagctgctttgcgacagtta
caagaggttttcaccacctataaaaaggagcgactggagagtgacaaggctttgactgag
cagaatgagaagcttcaggagcagctgtcagaacttcgctctcagaatgccaagacatcc
actcagttagagtttgcttccaagaggtatgaaatgctgcaggacaatgttgaaggttac
aggaaggagattgcggctcttcgggagaaagggcagaaaatggccgccgacacacaaaag
cttgagcagacagtcaacacactacaggaagatctgaagactgcaaaagagaaacttgcc
atggcacaggcccatgctgagaacctacgcaaggaaaaggacatgctgaagcttttggag
tccaggctgactcaagaaaaagaaactatcctaaaccaacagcagagtcagaacctgctg
cttacaaatctccagtctatccaagcctctctggagcgatcagagactgatgtacgtcag
cgtctcaacagccagatagagaagcaggaaagagaaatcacccagcttcaaaagaggctt
gaacaggaagtggaacagcgccatctgctaagcagaaaccaggagatccaggtcgtggat
ttgaagagacagctggaaacacaggtggctttgcatcaacggacaaaagagcagataaat
gtccttgaaatggagctcagcaccttcaggatgcagcaggggaacattgaaggacgtcac
accctgggctccccatctacacccatcagagttgcaagccttcagggtttggatcaagac
agagaagacctccaggcgcgcttgaagctcgccgaaacccgggcagaagagctggcagaa
agcctgagggccgccacctccagtatggagcagtacagagccatggctcagagcctggag
gagtccctgaacaaagagaagcaggtaactgagcaagcccgctcatccatcgaggctcgt
atgaaggaagctgaggaacagcaccgtgcgctcgaggaaagacttcagggaatggaaaaa
gaaaaacaagacttggaagaccagaagagaagagttgtggccggtcttgaggaggagata
aatagtcttaaaaaaagtctcagcagtgtccaggaagatcagcagacagtgctgcagagg
ctggttctttctgaggctcagcaacaacaggctctgatagacggccaagagcaggttaag
ctggcagctgaagctcaggataagtatgagcgggagatgatgctgcatgcagctgatgtg
gaggcgcttcaggctgcgaaggcccaggcttcgcaggctgttgagctcagacaccagttg
gaagagaaactgcagagggtcagtgcagagttactggaggctagagtttcctgggaagaa
caggaaaagatcctcaaggaggctgtttccaaagtggagagtcgtaatgaagagctgcaa
agccagaacaccctcctgcatgagcagctccagacaatgagcaccaagctggctgacagt
gtgcagcgcactgccaatgaaagtgccttaaatatatcactgactgaagagggaaaatct
caagaccagcttcttgaggttcttcggtttgtgcgtcgtgaaaaggagcttgcagagtcg
cgttttgaggtggctcaaggtgagagtttacgctatcgtttgaggatggagcacttggaa
cgagaactcaaggaggtgcaagacagcttgagcgctgcaagggaaagaatgcaggtgacc
gcaaagaccctggctcagcacgatgagttaatgaagaagacagaaactatgagcatctta
atggaaaccaacaagatgctgcgggaggagaaggacaaaatggaacaggagctgcagcaa
actcaagctaaggtggaaaagttagagaaggccatcatgccgctacagcagtcgaactca
gagctcagcgagaagagtggcatgctgcaggcggagaagatgattctcgaggaagagatc
aagcgttggaaggctcgtactcagcatttagtgagtcaacagaaagatttggatccagaa
gagtacaagcgtcttcactctgagagagaagcacacgtcaaacgtattcagcagcttagt
gaagagagtgcaagactcaaaatggagttgaccaggacaaataatctcacaacaggactg
caaggacagatacaaaacttgcgtgaaaatctgagtaaaataactgaagagaggaatatg
ctaaagaaggaagtggaaactaagaaccaggagctactagagaaggcgcggactattacc
caggtcaagaagattggacgccgctacaagacccagtatgatgagctgaaggtgacgcac
gacaagctggtttctgacacagcggcaggtccttcccaggacgaagaagcacgtcaggcc
tcagctcaagaactgcagagccttagagattctctgggccaagcgcaaaacaggagcaag
gagctggagggacagctggagaacatcagcaaggttgtaacagagcgagaaaatgaggta
cgcagtgcccaggaacagtcaaccaggctgcaggcagatttgaccagactgaggcaagag
ctgcaggagaaaacctctcaggaggacactctgagacagcagatggctgagaaggacgag
aaaaccagaaaagccctcatgtctgccaagcagaagatcagcctgctctcaaatactaaa
gagcagctccagaaggaaaatgaagaattaaagactcagcgtgaggagctggaggtgcgg
gtgagtgctctcaagtctcagtatgacggccgcctcagcagactggagcgggagctgaga
gatttgcgaggtcaacaggagagacaagaacagagagatgagccggctgaggcaggtccg
agcaagactcaggagcagcagaggagtactgaacaaagacagatcagtctgaagaccacc
ccaacctcagacaggggcagtgccaccacgtctgagcctccaactgccaacattaagcca
acacctgtagcacccacagccagcaagcaacctgtaaaccctggaaacaagcccacgccg
agagcaagcatcaagcccatgatcaccccagctcctgttcccactccgacccccacggct
acggtcatgcctacaacacaggtggaaacccaggaagtaatgcagccgacagagggacca
ccagtggagcatgtgacagtgtacggcagtgccagcggctctgtgcgctcttccagcccc
aacgtccagacaacattagctagccccatgctgactgtccagcagcctcaaacgcaggca
acagctttcgtccagccaacacagcagcagagcgtgacccacacagaaccttccagtcag
gagcctgtgatgatcgatgccacacccagctcacaggtggaatggccttcaacttcttct
gtgttcggcactgtttcagcaacatcaggatcatctgccatgtccaagaggcctcgtgaa
gaagaagagagcagcaccatggtgactgaaactgaggccactcaagaggacacctccagg
gctcctgtcccaaagaaactgcgcatcatccagagagtggggccagaggaggagctgctt
actgaggagagtgctgaggcggatggtgtggtcccaacagacagccaagacggtgaagca
agtcagacagaggagtttccattgatggaggaaggtgatgaaggagcagcctctcagtct
gttccctcagagcaagaggttgcaggcacccaaggtgaaacgccaagtcaactgcagcag
gaagtaatcgtaataatcactgatacagagagtgacgaagaccaggaagagggggaagaa
gaggaagaggagcaggaatatgaggaagaggaagaagaagatgatgaagaagaggaggac
gaagatgatgaggcagatgatgggggcatgggagaagaggaggaggaaagtaacgatggg
agtggagacggcaacgaggcttacgaaggagacgacccagagggagctgacgtgacagac
gctggcactgagacggaggagagtctgggggcgtcggactccacccagaggccagcagat
tcccagacacccagctttgaagggagcacagttgaggccttttccactgaacaaccaatc
tcaagttctggcgcgcgcatgcccccgtctccacggagaccggtgcagcagctctcccca
cgtttgaatgtccaccctgcccaatcgtcagaactgggaccacccgttcagcagcgtgtt
cctgttcgccgccagtcagtgggtcggctcactcctggaatgcagagctgtgttcccctt
cacaacgaggaagatgacaggatggttccctgcactcccacgcttcctcaccggcctgaa
ggcctggaccaggccgtacactctccccaggtgactggagtgtctcgcttgttcggttct
cctgaggacgtgccgcagaccagctcctcctcacactctgatctaggacagctcgcagca
caaggaggttttggaatgtatgaaaaccctttattgccaagtcatgaagaggagtctggt
ggacggagcgtaccaactacacccctgcaagtttgcggttcagaagctgcaccatccgac
acaacagagcatgcttctcagtcagtccccacggtgagcacatccacacccggccttgtt
gcggcagtcacagccagcacaggagatgaaggggagtcctccctcttggagtcggacact
gacaggtccagttctgaagtgttggtggatcctgtggtgtcacaggaagatatggaagtg
ccaagtcagccggctgacaaagccagcctcccgtcgaccagccaggaacccacctccagt
tctgctgatacaagcagtgctccccctagaccctctcgacctggatctggctctcgattt
ggacctctgcaacgctggacagacaatcgcagtgggcgtggaaagagaggaggtcaagcg
tttccatcccggggtgtaagtgggagacgatttgcaagataa
DBGET
integrated database retrieval system
