Oryzias latipes (Japanese medaka): 101172204
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Entry
101172204 CDS
T02443
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101172204 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101172204 (u2surp)
Spliceosome [BR:
ola03041
]
Complex A
U2 snRNP components
U2 related factors
101172204 (u2surp)
Complex B
101172204 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
101172204
NCBI-ProteinID:
XP_011487278
UniProt:
A0A3B3I5Y7
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All DBs
Position
20:19059626..19067607
Genome browser
AA seq
978 aa
AA seq
DB search
MIDFILVPQKMADRTPGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDELKKKEDE
RAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFDAQTKS
ILPLETPPQFLAFDRKQTVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFE
PLAGMEGRRSSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEF
GRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGK
GVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPPPKNKEEFEKTLSQ
AIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYR
WKLFTILQGESTAKWRTDDFRMFKNGSFWRPPPLNPYLHGPYDDGEEEEEEEEGSKKGCL
KEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIAR
LYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCF
RAWEDWAVYPDPYLIKLQNIFLGLVNLSADKEPPTVIVEPEPAEDIDGAPIGEFVESTLL
EDVDGVPIDGAPIDGEPIDGAPLDDIDGIPIKPMEEDIDGIPFDQSKEATFKVAPSKWEA
VDEAELQAQAVTTSKWEIFEQPEETKKGEDSDDDRSPRSEENQSYSNPIKDDADTKAKSS
GMNEEKRTKLREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLLKEKEKEKLER
EKEKEKKEKEKAEARLKELKKEKEKDDTPTRKERKRHHSGSPSPTRSSSRRGRSSSPRSE
RSERSDRSYSKDTSSRASHKDSPRSSNKKSSKRSPSSPRTPKRTRRSRSKTPKKSTKKSR
SRSRSPHRSHKKSKKSKH
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttattttagttccacaaaagatggcggaccgaacgcctggctctcaaaaa
gctagcgctaaggcgctgcttgagagcaaactgaaatcttttagcattggcaagatggca
gtagcaaaaaggaccttaagcaaaaaggaacaagatgaactaaagaaaaaggaggatgag
cgggcagcagcagagatttatgaggaatttcttgctgcattcgaaggtggaggagagggg
aaagttaaggcatttgtccgtggtggtatcgcaaatgcaacaaaagaagaagcagccgct
gatgagaaaaaaggaaagttatacaagcccaagtcccgttttgacgcccaaacaaaaagc
atcttgcctttggagaccccaccccaatttttagcatttgacagaaaacaaactgttaag
aaaaataccgaaaaggaaaagaagaagagtaacctggaactcttcaaggaagaacttaaa
cagattcaagaggaaagggatgaaagacacaagttgaaaggccgtgttagtcgttttgag
cccctcgctggcatggagggaagacgttcatcggatggttcttcaagaagaaaccgtccg
tccagtgttttggatgactgtgcaccaggttcccacgatgtaggagacccatccacaacg
aacctgtatcttggaaacatcaacccacagatgaatgaagaaatgttgtgtcaagagttt
ggtcgctacggccctctggccagtgtgaagatcatgtggccacggacagatgaggagaga
gctcgggagcggaactgtggctttgtggcttttatgaacaggagggatgctgagcgagca
ctcaaacacctcaatggaaagatgatcatgaactttgagatgaaattaggatggggcaaa
ggtgttcccattccaccccatcccatctacatccctccctctatgatggagcacactcta
ccgccgcctccctccggccttcccttcaatgcacagccccgagagaggctaaagaatcca
aacgctcccctgcttcctccacccaaaaacaaggaggagttcgagaagactctgtcgcaa
gccatagtcaaagtggttatcccaacagaaaggaatttgctctctctcatccatcgcatg
atcgagtttgtggtgcgtgaaggccccatgtttgaagccatgatcatgaacagagaaatc
aacaatcccatgtacaggtttttatttgaaaaccagagtccggcacatgtatattacaga
tggaagctcttcacaatattacagggggaatcgacagccaaatggcgaacagatgacttt
aggatgtttaaaaatggctctttctggcgtccaccacctctcaatccttacctccatggt
ccttatgatgacggtgaggaagaggaggaagaagaggagggcagcaagaaaggctgcctg
aaagaagatgagcgggacaaactggaggaaatgcttcgaggtttgagtcccaagagagga
gacgtggcggaggccatgctgttttgcctgaaccacgccgaagctgctgaggagattgtg
gagtgtatcgcagagtccctgtccatcctaaaaacccccctaccaaagaagattgcacgg
ttgtatttagtttcagatgtgctgtacaactcctcagccaaagtatccaatgcatcttac
tacagaaaatattttgagacaaagctctgccagatcttctcagatctcaacgccacatac
aaaacgatccaaggccacctccagagcgagaactttaagcaacgagtgatgtcatgtttc
cgggcatgggaggattgggcggtgtacccagacccttaccttatcaagctgcagaacatc
ttcctgggtctagtcaatctctccgcagacaaggagcctccaactgtcattgtggagcct
gagcccgcagaggacattgacggcgctcccataggggagtttgtagaaagcaccctactg
gaggatgtggatggggtgcccattgatggagcacccatcgacggggaacccatcgacgga
gcacctttggacgacatcgacggcattcctatcaagcctatggaagaggatatagatgga
atcccattcgatcagtccaaggaggcaacgtttaaggtggcgccctccaaatgggaagct
gtggacgaagctgagctgcaggcacaagctgtgacgacatcaaaatgggagatttttgag
cagccagaagaaaccaaaaagggcgaggacagcgatgacgacaggagccctcgctccgag
gaaaaccagagctactccaaccccatcaaggatgacgccgacacgaaagccaagtcatct
gggatgaacgaggagaaacgcaccaagctccgagagattgaggtcaaagtgatgaaattt
caggatgagcttgaatctgggaagagacccaaaaagcccggtcagagtattcaggagcag
gtggagcactacagggacaaactactgctgaaggaaaaagaaaaggaaaaactagaacgg
gaaaaagaaaaggagaagaaagagaaggagaaagctgaggctcggttgaaggagctgaag
aaagaaaaggagaaagatgacacgcctacgagaaaggagagaaagcggcatcacagcggc
tctcccagtccaacaagaagcagcagcagaagaggccgctcgtcctcgccacgttccgag
aggtcggaacgctccgacagatcctactctaaagacacatcgtcccgtgcctctcataaa
gactctccacgatccagcaacaagaaatcctcaaaaaggtcgccttcatccccacgcaca
ccgaaacgaacgaggaggtcgcgctcaaaaacgcccaaaaaatcaaccaagaagtcccgc
tccaggtcgaggtctccacaccggtcccacaaaaaatctaagaagagcaaacactga
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