Oryzias latipes (Japanese medaka): 101172212
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Entry
101172212 CDS
T02443
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04150
mTOR signaling pathway
ola04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101172212 (lrp6)
04150 mTOR signaling pathway
101172212 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172212 (lrp6)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101172212 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
101172212
NCBI-ProteinID:
XP_023808082
UniProt:
A0A3B3I8E4
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All DBs
Position
23:complement(23637786..23660697)
Genome browser
AA seq
1623 aa
AA seq
DB search
MGVALRSLLLLFSFSFVVRVAGEPLLLYANRRDLRLVDTAHEKANDTVVVGGLEDAAAVD
YVYSQGLIYWSDVSEEAIKRTFFNQSGASPVQTVVQGLASPDGLACDWLGSKLYWTDSET
NRIEVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEVPKIERAGMDGTNRSMI
IHKDIYWPNGLTLDYSQQKLYWADAKFNFIHRSNLDGSHREVVVKDELPHPFALTLYEST
LFWTDWNTHSIHSCTKETGRGQRTVHSNIFSPMDIHVFSPRRQPVSVNSPCSRDNGGCSH
LCLLAPSSPFFRCACPTGVQLLEDGRTCRDGATQMLLLARRTDLRQISLDTPDFTDVVLQ
VEDIRHAIAIDYDPVEGYLYWTDDDVKAIRRSRLDGSDAQFIVTSQVSHPDGIAVDWIAR
NLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERAD
LDGMERVVMVNTSLGWPNGLALDYHEGRMYWGDAKTDKIEVMNVNGTGRRVLVENKLPHI
FGFTLLGDHIYWTDWQRRSIERVHKRTAEREVIIDQLPDLMGLKATFVHEAFGSNPCAES
NGGCSHLCLYKPRGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVA
IPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL
GKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDR
AAMDGTGRITLVGNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLDREVIADDLPHP
FGLTQYQDYIYWTDWSQRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQGGWNACAA
TNGHCSHLCLAVPVSSFVCGCPAHFSLNEDNKTCSAPTSFLLFSQKSAINRMVIDEQQSP
DIILPIHNLKNVRAIDYDPLDKHLYWIDSKQNLIRRAQENGNQCTTVVSSSLIGPGQVLQ
LYDLSIDIFSRFIYWTNEATNVINVTRMDGSRVGVVLNGEQDRPRAIVVNPERGYMYFTN
LQDRSPKIERAALDGTEREVLFFGGLGKPVALAIDNDVGKLFWVDSDLRRIESSDLSGAN
RIVIADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKMTRDGRTKVQARVSYLSDIHAVH
ELDMRDYGKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPDQFA
CTSGEVDCIPQTWRCDGYSECDDSSDEEDCPVCSEDEFQCDSRQCIDLSLRCNGEVNCQD
RSDENKCEVPIRCPADQFSCSNGQCIGKHKKCDHNMDCSDNSDEIGCYPTEEPPPPTNST
INSIVGVVMALFVVGAIYFVCQRVLCPQMKDDGETVTTNDFVVHGPSSVPLGYVPHPSSL
SSSLPGMTRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPA
TVRSQYTLEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSS
GAAKGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPFTERSYSHHLYPPPPSPCT
DSS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgcgctgcggagtctgttgttgttgtttagcttttcttttgtcgtacgagtt
gcaggcgagccgctgcttctgtacgcgaaccggcgggacctccgcctggtggacaccgcc
cacgagaaggccaacgacaccgtggtggtgggcgggctggaggacgccgccgccgtggat
tacgtctactctcagggcctcatctactggagcgacgtcagcgaagaggccatcaaacgc
acgttcttcaaccagtcgggcgccagtccggtccagacggtggtgcagggtctggcctcc
ccggacggcttggcctgtgattggttggggagcaaactttactggacagactcagaaacc
aatcggatcgaggtcgcggagctggatgggtctctgagaaaggttctgttctggcaggag
ctggaccagcccagagccatagccctggatccagagcgagggttcatgtactggacagac
tggggggaggtcccgaagatcgagcgggcggggatggacggcaccaaccgctccatgatc
atccacaaagacatctactggcccaacgggctgacgctggactacagccagcagaagctg
tactgggcagacgccaagttcaacttcatccaccgctccaacctggacggatcccacagg
gaggtggtggttaaagacgagcttcctcaccccttcgccctcacgctgtacgagtccacg
ctcttctggaccgactggaacacccactccatccactcttgtaccaaggagacggggagg
ggccagcgcaccgtgcactccaacatcttctcccccatggacatccacgtgttcagcccc
cggagacagcccgtctcggtcaacagtccctgctcccgggacaatggcggatgctcccac
ctgtgcctgctggcgccgtccagccccttcttccggtgcgcctgtcccaccggcgtgcag
ctgctggaggacgggaggacctgcagagacggtgcgacccagatgctgctgctggctcgg
cggaccgacctgcggcagatctctctggacacgccagactttacggacgtggtgctgcag
gtggaagacatccgtcacgccatcgccatcgactacgaccccgtggagggttacctgtac
tggacggatgacgatgtgaaggccatccgtcgctcgcggctggacggcagcgacgcccag
tttatcgtcacgtctcaggtgagccatcctgacggcatcgcggtggactggatcgcccgg
aacctgtactggaccgacaccgggaccgaccgcatcgaggtgactcgtcttaacggcacc
atgcgcaagatcttgatctccgaggacctggacgagcccagagccatcgttctggaccct
gtggctggatacatgtactggaccgactggggcgaggtgccgaagatcgagcgggccgat
ctggacgggatggagcgggtggtgatggtgaacacctccctgggctggcccaacggcctc
gcgctcgactaccacgaagggaggatgtactggggggacgccaagacggacaagatcgag
gtgatgaacgtgaacggcaccgggcggcgggttctggtggagaacaagctccctcacatc
ttcggcttcacgctgctgggagaccacatctactggacggactggcagcgccgcagcatc
gagcgcgtccacaaacgcaccgcagagagggaggtcatcatcgaccagctgcccgacctc
atgggcctgaaggccacgttcgtgcacgaggcctttggttcgaacccgtgtgcagagagc
aacggcggctgcagccacctctgcctctacaagccgcggggggtccagtgcggctgcccc
atcgggctggagctcatcgccgacatgcggacctgcatcgtccccgaggccttcctgctc
ttctccagacacacggacatccgccgcatctccctggagaccaacaacaacaacgtggcc
atcccgctcaccggcgtcaaggaggcctccgcgctggactttgacgtcaccgacaaccgg
atctactggaccgacatcactctgaagaccatcagccgggcattcatgaacggcagcgct
ctggagcacgtggtcgagtttggcctggactatcctgagggcatggcggtggactggctc
gggaagaacctttattgggctgacaccggcaccaaccgcatagaggtggccaaactggac
gggcagcaccggcaggtcctggtctggaaggacctggacagcccgcgagctctggctctg
gatccagctgaggggtacatgtactggaccgaatggggcgggaaaccgaagattgacaga
gctgcaatggacggaaccggccgcattactctggtgggaaacgtgggccgggccaacggg
ctcaccattgattatgcggagcggcggctgtactggaccgacctggacaccacgctcatc
gagtcctcgaacatgctgggtctggaccgtgaggtgatcgccgatgacctcccacatccg
ttcggtctcacccagtaccaggactacatctactggacggactggagccagcgcagcatc
gagcgggccaacaagaccagcgggcagaaccgcaccctcatccagggccacctggactac
gtcatggacatcctggtgttccactcgtccagacagggcggctggaacgcctgcgccgcc
accaacgggcactgctcccacctgtgcctcgccgtgcccgtcagcagcttcgtctgcgga
tgccccgcccacttctccctcaacgaggacaacaagacctgcagcgcccccacctccttc
ctgctcttcagccagaagtcggccatcaaccggatggtgatcgacgagcagcagagcccc
gacatcatcctgcccatccacaacctgaagaacgtccgcgccatcgactacgacccgctg
gacaaacacctgtactggatcgactccaagcagaacctcatccgccgcgctcaggagaac
ggcaaccagtgcacgacggtggtgtccagctccctgatcggaccgggtcaggttctgcag
ctgtacgacctgagcattgacatcttcagccgcttcatctactggaccaacgaggccacc
aacgtcatcaacgtgacgcgcatggacggcagcagggtgggcgtggttctgaacggcgag
caggaccgaccgcgggccatcgtggtgaacccagagagggggtacatgtacttcaccaac
ctgcaggaccgctcccccaagatcgagcgggcggcgcttgacggcaccgagcgtgaggtt
ctgttcttcggcgggctggggaagcccgtcgccctggccatcgacaatgacgtggggaag
ctgttctgggtggactcggacctgcggcgcatcgagagcagcgacctttccggagccaat
cggatcgtgatcgcagactccaacatcctgcagccggtcgggctcaccgtgttcggaaac
catctgtactggatcgacaagcagcagcagatgatcgaacgcatcgacaagatgacgcgg
gacggccgcaccaaggtgcaggcgcgcgtgtcctacctgagcgacatccacgccgtgcac
gagctggacatgagggactacggcaaacacccgtgcacgtgggacaacggcggctgctcg
cacatctgcatcgtgaagggcgacgggacaacgcgctgctcctgccccgtccacctggtg
ctgctgcaggacgagctctcctgtggagagccccccacctgctcgccggaccagttcgcc
tgcacgtccggcgaggtggactgcatcccgcagacgtggaggtgtgacggctactcggaa
tgcgacgacagcagcgacgaggaggactgccccgtctgctccgaggacgagttccagtgc
gacagccgccagtgcatcgacctgagcctgcgctgcaacggggaggtcaactgccaggac
cgctccgacgagaacaagtgtgaagtcccgatccggtgtcccgccgatcagttctcctgc
tccaacggtcagtgcatcgggaagcacaagaagtgcgaccacaacatggactgcagcgac
aactctgacgagatcggctgctacccaacagaggagccgccgcctccaaccaacagcacc
atcaactccatcgtgggcgtggtcatggccttgttcgtggtgggcgccatctattttgtg
tgtcagcgcgtcttgtgtccccaaatgaaggatgacggcgagaccgtcaccaccaacgac
ttcgtggtccacgggccgtcgtctgtgccgctgggatatgttccacatccgagttcgctg
tccagctcgctgcccggtatgaccagagggaagtctgtcattggttccctaagcatcatg
ggcgggagcagcggcccgccatacgaccgggcccacgtcaccggggcctcgtccagcagc
tcgtccagcaccaagggcacctactttcctccgatcctgaaccctcccccctctcccgcc
acggtccggtcccagtacacgctggagttcggatactcctccaacagcccatccacccac
agatcctacagttaccggccgtacacctaccgccactttgctcctcccaccacgccctgc
agcacggacgtctgcgacagcgactacacgccgggacgccgggcgccgctcaagtccagc
ggcgctgcgaagggctacaccagcgacctcaactatgactctgagccgttcccgccgccg
ccaacgccccgcagccagtacctgtcggcggaggagaactgcgagagctgcccgccgtcg
cctttcaccgagcgcagctactcccaccacctctacccgcctccgccgtccccctgcacg
gactcctcgtga
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