Oryzias latipes (Japanese medaka): 101172256
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Entry
101172256 CDS
T02443
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ola03012
]
101172256 (dhx29)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101172256 (dhx29)
Translation factors [BR:
ola03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101172256 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
Helicase_C
OB_NTP_bind
HA2_C
DEAD
DSRM_DHX29
HA2_N
AAA_22
nSTAND3
FtsK_SpoIIIE
PcRGLX_3rd
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
101172256
NCBI-ProteinID:
XP_004074623
UniProt:
A0A3B3IA42
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All DBs
Position
12:complement(8952477..8967205)
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AA seq
1379 aa
AA seq
DB search
MGGKKKKSSAQAPAVALAAGERRNGAAAAGTGSGEEPTRQTATNKTQKPSKENKSKAPKT
YSLTNTAQVEKVSEKSVLKVYIKADLEKKIIKLINDFRQENADKGPISGRLTTKKLLDLY
TALQKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDEELPDGFSQQLQEESLKNRP
KFQPALQEKPAVQSPKASSNTHKDSHKATEKDEAATVKDWILRYAEQSSEDEEEEEEEGA
KKTFNPELEQKFDPNDRYLILTAQLYDAKEMATAAKSKVDKMGQRMAQDRIRIIQQEMKQ
LESHPMFNPAIKVVEAPQNEKKKAPVIEEKEDLSFGLFEQAEKDPPAEKVVKKNEPKDIR
NFDYTARSWTGKSPKQFLIDWVRKNLPKSPPPAFHKVPAGRYWRSRVRVQRAEDVLEVCP
TILTEDSMQAQHLAATLALYNLVKGQSVHQLLPPTYRDVWLEWKDSEQQQQQESRIAANK
PRDQFISRLLARLKQEQQNQSRGQQAASRAQSGEREEEPEESWENLDSLDIGDGSGDVED
KNKKSPGTRGGEAGLHAARELLLGLRKSPLASKLQAEREQLPVFQHRHQILEALQRHPVV
VVAGETGSGKSTQIPQFLLGELLTGGKTAQPCNIVVTQPRRISAMSLACRVSQELGCEDG
PGSKSSLCGYQIRMENQSGDWTRLLYCTTGVLLRKLQHDRQLSSLTHIIVDEVHERSVQS
DFLLTILKDVVMRRSDLHLILMSATVDCHKFSSYFNRCPVINIPGRTFPVEVYHLEDIVE
QTGYVLEKDSEYSQRILEEEEAVVSVAVSQKGGKTLQHQEVILRDSPTGWELGRDLDHFS
SRTRQVLQYMNPNKINMDLLVELLDYLDKSPQFADVDGAILVFLPGLAHIQQLYDLLSSN
KRFREKSRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTG
KTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRSGFCFRLYPKYRFDAFMDYSIPE
ILRVPLEELCLHIMKCQYGSPEDFLSRALDPPQPQSVSNAVNLLRKIGACHPNDHTLTPL
GHHLASLPVNVKIGKMLIYGAILGCLEPIATIAAAMTEKSPFSTPMNRKEEANLAKAALA
VANSDHLTIYNAYLGWKTVQTEGLKAEMSYCRKHFLNRTALITMEDVKHDLTKMMEQVGF
WSSRPSRVKQQAASLSKQQISVLNAALTAGLYDSVAPILCTPSVDVLEQIACTVETPQGK
AQVHPSSVNRSLQTHGWLLYQEKVKYGKIYLRDTTLISPFPMLLFGGDIDIQHREKLITL
DGWINFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMNLEGDPTIQLILDLIRSEHTAER
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaaaaaaaagaagtcgtcggctcaagccccggcggtggcactggcggcagga
gaacgtcggaacggagccgctgcagcgggtaccggctcgggagaggagccaacgaggcaa
acggccactaacaaaacgcaaaaaccatcaaaggagaacaagtctaaagctccaaagacc
tacagtttaaccaacactgcccaggtggagaaagtgtcagaaaagtcagttcttaaagtt
tacattaaagctgatctggaaaagaagatcattaagttgatcaatgacttcagacaggag
aatgcagataaagggcccatatctggcagacttacaaccaaaaaactgctggacttgtac
acggctctccagaagttcaacttcaagagagaacacatcgaagaggcaatgaagagtagt
gtcctgtatggaggcgatctacactctgcccttgactggctctgtctcaaccttaaagat
gaggagttacctgatggtttcagccagcagctgcaggaggagagcctaaagaatcggcct
aaattccagcctgcccttcaggagaaacctgctgtccaaagccccaaagcgtccagtaac
actcacaaagactctcataaggccacagaaaaggatgaagctgcaactgtaaaagattgg
atcttaaggtatgcagagcaaagtagtgaggatgaagaggaggaggaggaagaaggagca
aagaagacctttaatcctgaacttgaacaaaagtttgatcctaatgacaggtatttgatc
cttactgcacagctgtatgacgctaaagaaatggcaacagctgctaagagcaaagtggac
aaaatgggtcagagaatggcacaggacagaatacgcatcattcaacaagaaatgaagcaa
ttggagtcccatcctatgttcaacccagccataaaagtggtagaagctcctcaaaacgag
aaaaagaaagctccagtcattgaggagaaagaagatctcagcttcggtttgtttgagcaa
gcagagaaagacccccctgcagagaaagttgtgaaaaagaacgaaccaaaagacatccga
aactttgactacacagctcgcagctggacggggaagtctcccaaacagttcctcatcgac
tgggtgcgaaagaaccttcctaaaagtccaccgccagcttttcacaaagttcctgctggt
agatactggagatccagggtgcgtgtccagagagcagaagatgtactggaagtttgtcca
actatcttgactgaggacagcatgcaggctcagcatctggctgccactttggcgctctac
aatctggtgaaaggacaatcggtgcaccagctcctccctcccacctacagggacgtctgg
ctggagtggaaagacagcgagcagcaacagcagcaggagagccgcattgccgccaacaaa
ccccgggaccagttcatctcccggctcctggccagacttaaacaggagcagcagaaccag
agccgagggcagcaggctgcatcccgagcacagagcggagaacgggaagaggagcctgag
gaatcctgggagaacctggatagtcttgatattggagatggaagtggggacgttgaagac
aagaataagaaaagtccagggacaaggggaggagaagcaggccttcatgcagccagagag
ctcctcttgggcctgaggaagtctcccctggcgtccaaactgcaggcagagcgagagcaa
cttccagtttttcaacaccgacatcaaatcctggaggccttgcagcgccatccggtggtg
gtggtggcaggtgagacaggcagcggaaagagcacacagatccctcagttcctcctgggg
gagctgctgaccggaggaaaaactgctcagccctgcaacatcgtggtgactcagcctcgc
aggatctcagccatgagtttggcctgcagagtgtcccaggagctgggctgtgaagatggc
ccgggatctaagtcgtcgctgtgcggataccagatccggatggagaatcagtcaggagac
tggacccgcctgctgtattgcacgactggagttctgctcaggaagctccagcatgaccga
cagctcagctccctgacccacatcattgtggatgaggtccatgagcgtagcgtccagtca
gacttcctgctgaccatcctgaaagatgttgtgatgaggagatctgacctgcacctgatc
ctcatgagcgctacggtggactgccacaagttctccagctactttaaccgctgtccagtg
atcaacattccaggcaggactttcccggtggaggtatatcacttggaggacatcgtggag
cagacaggatacgtgctggagaaagactcggaatacagccagagaatcctggaagaagaa
gaagcagtggtctcggtcgctgtcagtcagaaaggtggcaagacattgcaacaccaggag
gtgattcttagagactcccccactgggtgggaacttggtcgagacctcgaccacttcagc
agcaggactcggcaggtgcttcagtacatgaaccccaataaaatcaacatggacttgctt
gttgagcttttggactacctagataaatctccacagtttgcagatgtggatggagccatt
ctggtctttctccctggactagctcacatccagcagctgtacgacctactctcctctaac
aagaggttccgggaaaaaagcaggtacaggattgttgccctccattcgactctgtcttca
aaggaccaggctgctgccttcacagtgccccctgctggagttagaaagattgtgctgtcg
accaacattgctgagacaggcgtgaccatccctgacgttgtgtttgttattgacactgga
aagaccaaagaaaacaagtaccacgagagcagccagatgagttccctggtggagacgttt
gtctccaaagccagcgccctccagaggcaggggagagcaggacgcgtcagaagtggcttc
tgcttcaggctttaccccaaatacaggtttgatgcttttatggattactccattccagaa
atcctccgggtcccactggaagaactctgtcttcacatcatgaaatgccagtatggatcc
ccagaggacttcctgagccgggctctggatcctcctcagcctcagtctgtcagtaacgca
gtcaacctcctcagaaagatcggtgcttgccaccccaacgatcacacccttacccctctg
gggcatcacttggcaagccttcctgtcaatgtaaagatcgggaagatgctcatctatgga
gccatcctcggctgcctggagcccatcgcaactatcgcagcagccatgacggagaagtct
cctttctctacacccatgaatagaaaggaggaagctaacctggcgaaagccgctctggca
gtagccaactctgatcacctcacaatatacaatgcatatttagggtggaaaactgttcag
actgaaggcctaaaagcagagatgtcttactgcaggaaacacttccttaatcgaacagct
ttaataacaatggaggatgtgaagcatgatctgacaaagatgatggagcaagttgggttt
tggtcatcccggccgtctcgcgtcaagcagcaggcagcctccctttcgaagcagcagatc
tctgttctgaacgcagcgctgacggcagggctgtatgacagcgtggcccccattctctgc
acgccctccgtggatgtgctggaacagatcgcctgcacggtggagacgcctcagggcaaa
gctcaggtccacccttcatctgtcaaccgcagcttgcagacgcacggctggctgctttac
caggagaaggtgaaatacggtaagatctatctgcgagacaccactttgatctctcctttc
cccatgctgctgtttggaggcgacatcgacattcagcacagagagaagctcatcacttta
gatggatggatcaacttccaggctccggtacggattggagtgatcttcaaacatctgagg
aaactgatggactctctgcttgaaaagaagctggagaaccccagaatgaaccttgaaggt
gacccaaccatccagctgattctggatctgattcggtccgaacacacggcagaacgctga
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integrated database retrieval system
