Oryzias latipes (Japanese medaka): 101172288
Help
Entry
101172288 CDS
T02443
Name
(RefSeq) amyloid-beta A4 protein isoform X2
KO
K04520
amyloid beta A4 protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101172288
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101172288
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ola00535
]
101172288
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101172288
Peptidases and inhibitors [BR:
ola01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
101172288
Proteoglycans [BR:
ola00535
]
Cell surface proteoglycans
Others
101172288
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Others
101172288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
Beta-APP
APP_Cu_bd
APP_amyloid
Insulin_TMD
Ald_deCOase
HTH_Tnp_Mu_1
Motif
Other DBs
NCBI-GeneID:
101172288
NCBI-ProteinID:
XP_004081464
UniProt:
A0A3B3HTC2
LinkDB
All DBs
Position
21:complement(3713668..3726310)
Genome browser
AA seq
682 aa
AA seq
DB search
MGENAAFVLLLAATLTLSSEVPVDDSVGLLTEPQVAMFCGKLNMHINVQSGKWEADPSGT
KSCIDTKEGLLRYCQEVYPELQITNVVEANQPVSITNWCKKGRKQCRSHPHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRSMNLHDYGMLLPCNVDRF
RGVEFVCCPVEGEREMDSAEREGVESDVWWGGAETEYSDDSMTRPAATEPATAEDVEDAS
EEEEENHEDEDLIDDRDSKERSAIIAMTTTTTTTTESVEEVVRVPTVAPSPPDAVDRYLE
APGDDNEHANFQKAKEQLEAKHREKMSVVMREWEEAERQAKSLPRAEKKALIQHFQEKVE
ALEQEAADERQQLVETHIARVEALINSRRRLALENYLNALQANPPRPNQVLNLLKKYVRA
EQKDRQHTLKHYEHVHSVDPKKAAQIRPQVLTHLRAIEERMNQSLGLLFKVPRVANEIQN
QVAIIVQRVLSEQSQQVSSLQTDKRVDGRISYGNDALMPDQAFSSAPMDPGLDRLGFIHP
ESFNQPNTENHVEPVDARPNPDRGLPTRPVSALKPEEMANVRMETGDRQSASFEVYHEKR
VLLSEDVGSNKGAIIGLMVGGVVIATIIVITLVMLRKKQYTSIHHGVIEVDAAVTPEERH
LARMQQNGYENPTYKFFEQMQN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaacgcggcgtttgtgctgctgctcgcggcgaccttgacgctttcatccgag
gtacctgtggatgactccgttggcttgctaactgaaccccaggttgccatgttctgtggg
aagctcaacatgcacatcaacgtgcagagcggcaagtgggaggcggacccgtccggcacc
aagagctgcatcgacaccaaggagggccttctgcgctactgccaggaggtctatccagag
cttcagatcacaaatgttgtggaggccaaccagccggtcagcattactaattggtgcaag
aaaggccgtaagcagtgtcgcagccacccacacattgtggtgccataccgctgtttggtt
ggagagtttgttagcgatgcccttctcgttcccgacaagtgcaagtttctgcaccaggag
cgcatggatcagtgtgagagccacctgcactggcacactgtggccaaagagtcctgtgga
gaccgttctatgaatctccatgactacgggatgctgttgccgtgcaatgtcgatcgtttc
cgaggggtggagtttgtgtgctgcccagtggagggggagcgtgagatggacagcgcggag
agagaaggggtggagtctgatgtgtggtggggcggagctgagaccgaatactccgacgac
agcatgacgcgtccagccgccacggaacccgccaccgccgaggacgtggaggacgcctcc
gaggaggaggaggaaaaccacgaggacgaagacttgatagacgatcgcgacagcaaggag
cgcagtgccatcattgccatgacaaccaccactaccaccaccactgaatctgtggaagaa
gtcgtgcgagtgcccacggtggcgcccagtcctcccgacgccgtggatcgatacctggaa
gcgcccggggacgacaacgaacacgccaacttccagaaggcaaaggaacagctggaggcc
aaacacagagagaagatgtctgtggtgatgagggagtgggaggaggctgagaggcaggct
aagagcctccctcgtgcagaaaagaaagccctcatccagcacttccaggagaaggtggag
gccttggagcaagaggctgccgacgagagacagcagctggtggagacccacatcgcacgg
gtggaggcgctgatcaacagccgccgccgcctggctctggaaaattacctcaatgctctg
caggccaaccccccacggcccaaccaggtgctgaacctgctgaagaagtacgtccgcgcc
gagcagaaggacaggcagcacacgctcaaacactacgaacacgtacacagcgtcgacccc
aagaaggcggcgcagatccgacctcaggtcttgacccaccttcgcgcgatcgaggagagg
atgaaccagtctctgggtttgctcttcaaagttccccgagtggcaaatgagatccagaac
caagtcgcaattattgtgcagagagtcctgtcggagcagtcccagcaggtgtcttccctg
cagactgacaagcgggtggacggcaggatcagctacggtaacgacgccctgatgccggat
caggccttcagctctgctcccatggatccaggtctggaccgactgggcttcattcacccg
gagagcttcaaccagcccaatacagaaaaccacgtggagccggtggatgctcgacccaac
ccagacagaggactcccaacacgacccgtttcggccctgaagccagaggagatggcaaat
gtccgaatggagacgggagacaggcagagtgccagctttgaagtttaccacgagaaacgg
gttctgctctctgaggacgtcgggtccaataagggtgctattatcgggctcatggttgga
ggcgttgtcatagcgaccatcatcgtcatcactttggttatgctcaggaagaagcagtac
acgtccatccaccacggggtgattgaggtggatgccgccgtgacccccgaggaacgccat
ctggcccgtatgcagcagaacggctacgagaaccccacctacaagttcttcgagcagatg
cagaactaa
DBGET
integrated database retrieval system
