Oryzias latipes (Japanese medaka): 101172292
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Entry
101172292 CDS
T02443
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101172292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101172292
Spliceosome [BR:
ola03041
]
Complex A
U1 snRNP components
U1 related factors
101172292
Complex B
101172292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
101172292
NCBI-ProteinID:
XP_011488376
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All DBs
Position
22:1890018..1900764
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AA seq
847 aa
AA seq
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MSYPPPMNRPQVGLPQLPPGIPPPQYGGFAPPVPPGTPMIPVHMGVVAPAPTVLVPTAVT
ITQKPIAAKKEHGMGRARDADDGAGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRV
QGASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLEEWKAKRRSA
NGETGDGLKKPDEDEEEVLDEETLRRDQVANGAIEVLLKEYSSELNAPSQDADSQPRNKK
RKEKKEEEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERQELEKERRERDK
ERERERERRDREKEKERERERDKERERERERDRERERTKERERERDRSRDVSEARSRSRE
RTREERKRERDEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKARDYNKDAEREE
ERRRETMKEAKRLKEFLEDYDDERDDLKYYRGSAFQKRLRDREKEIEMDERDRKREKEEL
EEIRQRLLAEGHPDPDAELQRMEEEAERRRQPPPLKLEPEEHVTQEKCRRDRDRDRDRDR
DRVREKEREREREREREREREREKRATQRPIEPAPPVPPPHSDNDGENGEEDIFRDDEAS
QEAKPQPKPAMRPITTAPSVSSASGNATPNSPSNESPCGIIIPGENTPDLQPLDEHRPKI
GLSLKLGATNSPAQLNAVKRKKLAPVDSVFNKFDDDEADEQPRKRKLVPLDYGDDDKSLG
LDGAEMSAPKGSVNTEEKRKHIKSLIEKIPTARPELFSYPLDWAMVDSILMDRRIRPWIN
KKIIEYIGEEEPTLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEA
KKIGLVK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacccgcctccgatgaaccggccgcaggtcggcctcccccagcttcccccaggg
atccccccgccgcagtacggaggcttcgcccctccagttccaccaggtactcccatgatc
ccagttcacatgggcgtagtggcccccgcgcccacagttctggttccaactgcggtcacc
attacccagaagcccatagctgcaaagaaggagcacggcatggggcgggccagggatgcg
gacgacggcgcgggccccaccaccaccgtgtttgtggggaacatctcagaaaaggcctcc
gacatgttggtcaggcagctgctggctaaatgtgggattgttctcagctggaagcgagtc
caaggtgcttctgggaaacttcaagccttcggtttctgcgagtacaaggagccggaatcg
acactccgagcgctccggcttctgcacgagctcctcttaggggacaagaagctgctggtg
aaggtggacgccaagaccaaggctcagctggaggagtggaaggccaagaggaggagcgcc
aacggggagaccggcgatgggttgaaaaagccagatgaagatgaggaggaggtcctcgac
gaagaaactctgcggcgggaccaggtggcgaacggcgccatcgaagtcctcctcaaagag
tactcgagcgagctgaacgccccttcccaggacgccgacagtcagccgcgcaacaagaaa
cgcaaggagaagaaagaggaggaggacatcaacgccatggagatggaggacgacaaacga
gacctgatctccagagagatcagcaaattccgcgacacgcacaagaaactggaagaagaa
aaaggaaagaaggaaaaggagcgtcaggagctggagaaggagaggagggagagggacaaa
gaaagggagcgcgagagggaacgccgcgaccgcgagaaggagaaggagcgcgagagggag
cgggacaaggagcgcgagagggagcgggagcgcgaccgggagcgtgagaggacgaaggag
cgggagcgggagcgggacaggagccgggacgtcagcgaggctcgcagccgctccagggag
aggacaagagaagaaaggaaacgtgagcgtgatgaagacgaggaagatgtgtacgaaagg
cggaggctggagaggaggctcagagacaaagaagctgcttaccaagaacgtttaaaaaac
tgggagatccgcgagaggaagaaggctcgggactacaacaaagacgcagagcgggaggag
gagcggcggcgggagactatgaaagaagccaaaaggttgaaggagttcctggaggactac
gacgacgaaagggacgacctgaaatactacaggggcagcgctttccagaagcgactccgg
gatcgagagaaggagatcgagatggacgagcgggaccggaagagagaaaaggaggagctg
gaggagatccgacagaggctcctggccgagggtcacccggacccggatgctgagctgcag
cggatggaggaggaggctgagcgcagacgacagccccctcccctcaaactcgaaccagag
gagcacgtgacccaggagaagtgtcgccgggatcgggaccgagatcgggaccgagaccgg
gaccgggttcgggaaaaggagagggaacgggaacgggaacgagaacgagaacgagaacga
gaacgggagaagagagcgactcagagacccatagagccggcccccccagtgccccctccg
cattcggataacgacggggagaacggggaggaggacatcttccgtgacgacgaggcctca
caagaggccaagccacaaccaaaacccgccatgcggcccatcaccaccgccccctccgtg
tcctctgccagcgggaacgcaactccaaactcccccagcaacgagtctccgtgcggcatc
atcattccgggggagaacacccccgacctccaacctttggacgagcaccggcccaagatc
ggcctcagtctcaagctgggagccacaaacagcccggctcagctcaacgccgttaagcgg
aagaagctggcgcccgtcgacagcgttttcaacaagtttgacgacgacgaagccgacgag
cagccgcgcaagcggaagctggtccctctggactacggcgacgacgacaagagcctgggc
ctggacggcgccgagatgtccgcgcccaaaggcagcgtcaacaccgaggagaaacgcaaa
cacataaagagcctgatcgagaagatccccacggcacggcccgagctcttctcctacccg
ctggactgggccatggtggactcgattctgatggaccgccgcataaggccgtggatcaac
aagaagatcatcgagtacatcggggaggaggagccgacgctagttgattttgtctgttct
aaggtaatggcacacagcactcctcagggcatccttgatgacgttgccatggtcctcgac
gaagaagcagaagtcttcatagtaaaaatgtggaggctgctgatttatgaaacggaagca
aagaagatcggactggtgaagtga
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