KEGG   Oryzias latipes (Japanese medaka): 101172393
Entry
101172393         CDS       T02443                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101172393 (rnf4)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101172393 (rnf4)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101172393 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-C3HC4_4 zf_RING_Vps8 zf-RING_4 Rtf2 zf-rbx1 zf-RING_6 zf-RING_10 IBR_1 zf-RING_11 zf-ANAPC11 zf-UDP zf-RING_16 IBR Zn_ribbon_6
Other DBs
NCBI-GeneID: 101172393
NCBI-ProteinID: XP_004086538
LinkDB
Position
10:complement(3824998..3829016)
AA seq 196 aa
MSSSAQRKRRPTESPRVSRPSIKTSRVAQSRRAVNRGTHTGADSAPPAETIDVMDNTDDG
VEEVVDLTCEGAEAAVVDLTNNNDSVLLVDEDPQSSTVPAGESYVLSSDEDEDTPLFSSA
ATAAAAHASRSTPGLISCPVCLDLYSEIVGSGRLVVSTKCGHVFCSQCLRDSLTSSHTCP
TCRKRLTSRQYHPLYV
NT seq 591 nt   +upstreamnt  +downstreamnt
atgagtagctctgcccagaggaagagaaggcccaccgaaagtcctcgggtctccaggccc
agcatcaagaccagcagagttgctcaatccaggagagcggtcaaccgggggactcatacc
ggtgcagactccgctccccctgccgagaccatcgacgtgatggacaacacggacgacggt
gtggaggaggtggtggaccttacctgtgagggagcagaagctgctgtggtggacctgacc
aacaacaacgactctgtgctgctggtggatgaggatcctcagagcagcacagtccctgca
ggtgagagctacgtcctgagcagtgatgaagatgaggacacgccccttttcagcagcgcc
gccaccgcggcggccgcacatgcatcaaggtcgacgccaggcctgatcagctgtccggtc
tgtctggatctgtactctgagattgtcgggagtggccggttggtcgtctccacaaagtgt
ggtcacgtcttctgcagccagtgtctaagagactctctgacctcctcgcacacctgcccc
acctgcaggaagagactcacctcccgacagtaccaccccctctacgtctga

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