Oryzias latipes (Japanese medaka): 101172425
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Entry
101172425 CDS
T02443
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101172425 (gtf3c5)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
101172425 (gtf3c5)
TFIIIC, fungi type
101172425 (gtf3c5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
BSP_II
Motif
Other DBs
NCBI-GeneID:
101172425
NCBI-ProteinID:
XP_004075167
UniProt:
H2MHF9
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All DBs
Position
12:27433426..27441781
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AA seq
530 aa
AA seq
DB search
MAAEPRYQRLDFTLKELTLPGAAEDAVPGSSSTLELRDRKLVCVEYPAVVHNTDKMLDTL
GGEQAVSKTFADPNRRLELRFRPQDPFCHSACGNRLSSSNILLRVRRRVRRKDPKDAEIQ
MDVVGIIGTTYKFQGLADFQYLAVDSQGGMHTSLYDRIILRQTETQEFFEQPVPYFLPPV
IFSRLDNPMDYFYRAEAHQAPQTYANKNSIGLNRARRPHNAIFVSFNDAVVPTECLEGAR
QNWARCCLKDNDRLAEEQIKKMFESRPIWSKNAVKANFNIHPEKLKLLLPLFAYYMVTGP
WRSLWVRLGYDPRKDPESKKYQMLDFRMRCSTKHGYSFSKLLVKAKRSSLNYSLPITLNK
AVPQATSVMHIPSRENPSTSRDSAPLSYQLKESAYIFREGMLPPYRQMFYQLCDLDVDSI
RQAIEQSSGTEQQCLERDGWCAAGTTDKLRDLIFSMIKNVMQAQKQGFLDLPKKKRRNKL
CVQSLLKDVDPEEEEEEEECENKEDEDEDDEVQLSDGSENEMETEILDYL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagaacccaggtaccagaggctggattttaccctgaaggagctgaccctgccg
ggtgcggcggaggacgcggtgccgggcagctcgtccaccctggagctgcgggacaggaag
ctggtgtgcgtggaataccccgcggtggtccacaacacggacaagatgctggacaccctg
ggcggggagcaagccgtgagcaaaacttttgccgaccccaacaggcgcctggagctgcgt
ttccggccccaggaccctttctgtcactctgcctgcgggaaccgcctctcctccagcaac
atcctcctccgagtgaggcggcgcgtccgaagaaaagaccccaaggacgccgagatccag
atggatgtagttggaatcattggaaccacctataaattccaaggcctggcagactttcag
tacctggccgtggactctcagggaggaatgcacacgtctctgtacgacagaataatcctg
cgccaaacggagacccaggagttcttcgaacagcccgtgccgtacttcctgccgcccgtg
atcttctcgcgcctggacaaccccatggactacttctaccgcgccgaagcccatcaggcc
ccccaaacgtacgcaaacaagaactccattggtttgaatcgcgctcgccggccccacaac
gccatatttgtcagcttcaacgacgccgtggtgcccacagagtgtctggagggggccagg
cagaactgggcccgctgctgcctgaaggacaatgaccgactggcggaagagcagataaag
aagatgtttgagagccggcccatctggtccaagaatgcagtgaaggccaacttcaacatc
cacccggagaagctgaagctgctgctgcctctcttcgcctactacatggtgaccggaccg
tggcgaagcctgtgggtcaggctaggctacgatcctcgcaaggacccggagtccaagaaa
taccagatgctggacttcaggatgcgctgcagcaccaaacacggatactccttttccaaa
ttgctggtgaaagctaagcggagctccctgaactacagccttcccatcacgctgaacaaa
gcagtccctcaggccaccagcgtgatgcatattccctctcgggaaaaccccagcaccagc
cgggattctgctcctctgtcctaccagctgaaggagtctgcatacatcttcagggaaggc
atgcttcctccgtaccgacagatgttctaccagctctgtgacttggacgtggacagcatc
aggcaggcgatcgagcagagcagcgggacggagcagcagtgcttggagcgagatggctgg
tgtgctgccggcaccacggacaagctgagggacctgatcttctccatgatcaagaatgtc
atgcaggctcagaaacaaggtttccttgacctccccaaaaagaaacggcgcaacaaactg
tgtgtacaatctctgttgaaagatgtggatccagaggaagaggaggaggaagaggagtgt
gaaaacaaggaggatgaggacgaggatgatgaagttcagctgtctgatggaagtgaaaat
gagatggagacagaaattcttgattatttgtga
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